RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 RAB15P59190 212 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 CYP4F8P98187 520 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 LCP2Q13094 533 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 GPAT3Q53EU6 434 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 ARMCX4Q5H9R4 360 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 CHST9Q7L1S5 443 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 SPATA19Q7Z5L4 167 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 ANKRD46Q86W74 232 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 OSTM1Q86WC4 334 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 ANKFN1Q8N957 763 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 ZNF540Q8NDQ6 660 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 RAB2BQ8WUD1 216 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 WDR12Q9GZL7 423 aaKnown RBP10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 SGK2Q9HBY8 427 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 INTS10Q9NVR2 710 aaKnown RBP10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 ACTR3BQ9P1U1 418 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 ATP6V1HQ9UI12 483 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 PCDHB1Q9Y5F3 818 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 GSAPA4D1B5 854 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 ADH1CP00326 375 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 C8AP07357 584 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 DNAJB1P25685 340 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 TLX1P31314 330 aaPredicted RBP10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 KCNQ1P51787 676 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 HERVK_113P63132 956 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 TMEM102Q8N9M5 508 aaPredicted RBP10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 FEM1CQ96JP0 617 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 ERVK-6Q9BXR3 956 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 ANKRD60Q9BZ19 345 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 RSPH9Q9H1X1 276 aaPredicted RBP10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 AP3M1Q9Y2T2 418 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 CCDC162PA2VCL2 907 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 J3KR12 359 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 FFAR2O15552 330 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 SLC7A4O43246 635 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 SNAI1O95863 264 aaPredicted RBP10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 TRBC1P01850 177 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 HLA-DQB2P05538 268 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 C8BP07358 591 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 ALOX12P18054 663 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 TALDO1P37837 337 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 MAPKAPK2P49137 400 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 GSK3BP49841 420 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 CACNG1Q06432 222 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 RABL3Q5HYI8 236 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 FAM46CQ5VWP2 391 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 EIF3MQ7L2H7 374 aaKnown RBP10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 GET4Q7L5D6 327 aaPredicted RBP10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 ZBTB2Q8N680 514 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 NELL1Q92832 810 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 ITCHQ96J02 903 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 REXO4Q9GZR2 422 aaKnown RBP10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 MEAF6Q9HAF1 191 aa10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 CCM2LQ9NUG4 571 aaPredicted RBP10.67□□□□□ -0.7
PCDHGA1-202ENST00000517417 CLDN25C9JDP6 229 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 ZNF195O14628 629 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 TOR1BO14657 336 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 TRIM24O15164 1050 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 SEC24AO95486 1093 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 HTR1BP28222 390 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 KIR3DL1P43629 444 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 HCAR3P49019 387 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 C1QTNF8P60827 252 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 TLE2Q04725 743 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 MOGQ16653 247 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 PAGE2Q7Z2X7 111 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 PIM3Q86V86 326 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 CFAP206Q8IYR0 622 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 FLCNQ8NFG4 579 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 PSMA8Q8TAA3 256 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 S100ZQ8WXG8 99 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 FUBP3Q96I24 572 aaKnown RBP eCLIP10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 ABCB10Q9NRK6 738 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 SOHLH2Q9NX45 425 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 MSRAQ9UJ68 235 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 ZNF232Q9UNY5 417 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 RBMX2Q9Y388 322 aaKnown RBP10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 PCDHGB5Q9Y5G0 923 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 A0A1W2PQ67 120 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 OR10H3O60404 316 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 ZNF10P21506 573 aaPredicted RBP10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 SLC6A2P23975 617 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 HTR7P34969 479 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 MANFP55145 182 aaKnown RBP10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 PRR23CQ6ZRP0 262 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 C16orf62Q7Z3J2 963 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 ARMC8Q8IUR7 673 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 NPWQ8N729 165 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 ZNF420Q8TAQ5 688 aaPredicted RBP10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 ZUFSPQ96AP4 578 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 PPCDCQ96CD2 204 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 FAIM2Q9BWQ8 316 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 CEP44Q9C0F1 390 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 DNAJC11Q9NVH1 559 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 ENOPH1Q9UHY7 261 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 A0A1W2PRU2 124 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 MED26O95402 600 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 FGBP02675 491 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 SSR2P43308 183 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 TECRLQ5HYJ1 363 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms