RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 TEFMQ96QE5 360 aaKnown RBP-1.39□□□□□ -2.63
SNORA40.16-201ENST00000517238 LRMDAQ9H2I8 198 aa-1.39□□□□□ -2.63
SNORA40.16-201ENST00000517238 VPS37BQ9H9H4 285 aa-1.39□□□□□ -2.63
SNORA40.16-201ENST00000517238 ZNF277Q9NRM2 450 aaPredicted RBP-1.39□□□□□ -2.63
SNORA40.16-201ENST00000517238 KLRF1Q9NZS2 232 aa-1.39□□□□□ -2.63
SNORA40.16-201ENST00000517238 DHRS4-AS1Q9P1J3 65 aa-1.39□□□□□ -2.63
SNORA40.16-201ENST00000517238 ABI3Q9P2A4 366 aa-1.39□□□□□ -2.63
SNORA40.16-201ENST00000517238 TBC1D29Q9UFV1 150 aa-1.39□□□□□ -2.63
SNORA40.16-201ENST00000517238 IVNS1ABPQ9Y6Y0 642 aa-1.39□□□□□ -2.63
SNORA40.16-201ENST00000517238 SDK1Q7Z5N4 2213 aa-1.39□□□□□ -2.63
SNORA40.16-201ENST00000517238 FAT1Q14517 4588 aa-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 MTCL1Q9Y4B5 1905 aaKnown RBP-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 TRAV9-2A0A087WT02 112 aa-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 IGHV3-16A0A0C4DH30 117 aa-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 OR6C76A6NM76 312 aa-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 RPL36A-HNRNPH2H7BZ11 118 aa-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 ATP6V0E1O15342 81 aa-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 ATP2C2O75185 946 aa-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 LETM1O95202 739 aaPredicted RBP-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 FTLP02792 175 aaPredicted RBP-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 KRT19P08727 400 aa-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 G6PDP11413 515 aa-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 HOXB9P17482 250 aaPredicted RBP-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 CD58P19256 250 aa-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 HLA-FP30511 346 aa-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 DDIT3P35638 169 aa-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 NDUFV3P56181 108 aaKnown RBP-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 TAS2R50P59544 299 aa-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 ACTA2P62736 377 aa-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 ACTC1P68032 377 aa-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 COG7P83436 770 aa-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 CDK3Q00526 305 aa-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 SLC13A2Q13183 592 aa-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 ZNF177Q13360 481 aaPredicted RBP-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 TNK1Q13470 666 aa-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 SLC29A2Q14542 456 aa-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 PLS1Q14651 629 aa-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 HERPUD1Q15011 391 aa-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 ARHGEF6Q15052 776 aa-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 ZNF630Q2M218 657 aaPredicted RBP-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 KRT24Q2M2I5 525 aa-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 TMEM44Q2T9K0 475 aa-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 KRTAP19-8Q3LI54 63 aa-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 ZACNQ401N2 412 aa-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 TXNRD3NBQ6F5E7 133 aa-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 MAP7D3Q8IWC1 876 aa-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 ZNF664Q8N3J9 261 aa-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 USP38Q8NB14 1042 aa-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 OR56A3Q8NH54 315 aa-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 AENQ8WTP8 325 aaKnown RBP-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 HTRA1Q92743 480 aa-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 C18orf8Q96DM3 657 aa-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 FAR2Q96K12 515 aa-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 DOK1Q99704 481 aa-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 SLC25A32Q9H2D1 315 aa-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 CISD1Q9NZ45 108 aaKnown RBP-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 WDR35Q9P2L0 1181 aa-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 MAGEC2Q9UBF1 373 aaPredicted RBP-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 SLC25A13Q9UJS0 675 aa-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 CA14Q9ULX7 337 aa-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 UBE2J1Q9Y385 318 aaPredicted RBP-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 DYNC1LI1Q9Y6G9 523 aaKnown RBP-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 C2orf16Q68DN1 1984 aa-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 FLNAP21333 2647 aaKnown RBP-1.4□□□□□ -2.63
SNORA40.16-201ENST00000517238 PLA2R1Q13018 1463 aa-1.41□□□□□ -2.63
SNORA40.16-201ENST00000517238 CABIN1Q9Y6J0 2220 aa-1.41□□□□□ -2.64
SNORA40.16-201ENST00000517238 IGKV1D-42A0A075B6H8 117 aa-1.41□□□□□ -2.64
SNORA40.16-201ENST00000517238 OR5K3A6NET4 321 aa-1.41□□□□□ -2.64
SNORA40.16-201ENST00000517238 ZSCAN5CA6NGD5 496 aaPredicted RBP-1.41□□□□□ -2.64
SNORA40.16-201ENST00000517238 PDHXO00330 501 aa-1.41□□□□□ -2.64
SNORA40.16-201ENST00000517238 VILLO15195 856 aa-1.41□□□□□ -2.64
SNORA40.16-201ENST00000517238 SLC16A6O15403 523 aa-1.41□□□□□ -2.64
SNORA40.16-201ENST00000517238 SLC25A17O43808 307 aa-1.41□□□□□ -2.64
SNORA40.16-201ENST00000517238 GPR137BO60478 399 aa-1.41□□□□□ -2.64
SNORA40.16-201ENST00000517238 RHBDL1O75783 438 aa-1.41□□□□□ -2.64
SNORA40.16-201ENST00000517238 STK10O94804 968 aaKnown RBP-1.41□□□□□ -2.64
SNORA40.16-201ENST00000517238 TFAP2AP05549 437 aa-1.41□□□□□ -2.64
SNORA40.16-201ENST00000517238 GSTM2P28161 218 aa-1.41□□□□□ -2.64
SNORA40.16-201ENST00000517238 UQCRFS1P47985 274 aa-1.41□□□□□ -2.64
SNORA40.16-201ENST00000517238 GSK3BP49841 420 aa-1.41□□□□□ -2.64
SNORA40.16-201ENST00000517238 ITGA7Q13683 1181 aa-1.41□□□□□ -2.64
SNORA40.16-201ENST00000517238 GGTLC2Q14390 218 aa-1.41□□□□□ -2.64
SNORA40.16-201ENST00000517238 MMEL1Q495T6 779 aa-1.41□□□□□ -2.64
SNORA40.16-201ENST00000517238 ZNF506Q5JVG8 444 aa-1.41□□□□□ -2.64
SNORA40.16-201ENST00000517238 TLDC1Q6P9B6 456 aa-1.41□□□□□ -2.64
SNORA40.16-201ENST00000517238 PIK3AP1Q6ZUJ8 805 aa-1.41□□□□□ -2.64
SNORA40.16-201ENST00000517238 RNF144BQ7Z419 303 aa-1.41□□□□□ -2.64
SNORA40.16-201ENST00000517238 RPAP2Q8IXW5 612 aaPredicted RBP-1.41□□□□□ -2.64
SNORA40.16-201ENST00000517238 OR4N2Q8NGD1 307 aa-1.41□□□□□ -2.64
SNORA40.16-201ENST00000517238 OR6T1Q8NGN1 323 aa-1.41□□□□□ -2.64
SNORA40.16-201ENST00000517238 OR5R1Q8NH85 324 aa-1.41□□□□□ -2.64
SNORA40.16-201ENST00000517238 ABHD5Q8WTS1 349 aa-1.41□□□□□ -2.64
SNORA40.16-201ENST00000517238 TSKUQ8WUA8 353 aa-1.41□□□□□ -2.64
SNORA40.16-201ENST00000517238 SLC35A4Q96G79 324 aa-1.41□□□□□ -2.64
SNORA40.16-201ENST00000517238 RIPOR3Q96MK2 946 aa-1.41□□□□□ -2.64
SNORA40.16-201ENST00000517238 BUD13Q9BRD0 619 aaKnown RBP eCLIP-1.41□□□□□ -2.64
SNORA40.16-201ENST00000517238 STK31Q9BXU1 1019 aa-1.41□□□□□ -2.64
SNORA40.16-201ENST00000517238 ACBD3Q9H3P7 528 aa-1.41□□□□□ -2.64
SNORA40.16-201ENST00000517238 ATP6V0A4Q9HBG4 840 aa-1.41□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms