RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 MSX1P28360 303 aa10.86□□□□□ -0.67
TRIM41-209ENST00000515834 ZNF527Q8NB42 609 aa10.86□□□□□ -0.67
TRIM41-209ENST00000515834 PHC3Q8NDX5 983 aa10.86□□□□□ -0.67
TRIM41-209ENST00000515834 SLC22A8Q8TCC7 542 aa10.86□□□□□ -0.67
TRIM41-209ENST00000515834 ACMSDQ8TDX5 336 aa10.86□□□□□ -0.67
TRIM41-209ENST00000515834 NSMCE3Q96MG7 304 aa10.86□□□□□ -0.67
TRIM41-209ENST00000515834 SMURF1Q9HCE7 757 aa10.86□□□□□ -0.67
TRIM41-209ENST00000515834 GKN1Q9NS71 199 aa10.86□□□□□ -0.67
TRIM41-209ENST00000515834 WNT6Q9Y6F9 365 aa10.86□□□□□ -0.67
TRIM41-209ENST00000515834 TTC24A2A3L6 582 aaPredicted RBP10.85□□□□□ -0.67
TRIM41-209ENST00000515834 ANXA2P2A6NMY6 339 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 TBX18O95935 607 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 ANXA2P07355 339 aaKnown RBP10.85□□□□□ -0.67
TRIM41-209ENST00000515834 CDKL1Q00532 357 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 CD47Q08722 323 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 TEAD2Q15562 447 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 DENND5AQ6IQ26 1287 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 LCLAT1Q6UWP7 414 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 ZZZ3Q8IYH5 903 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 CPNE9Q8IYJ1 553 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 MSL3Q8N5Y2 521 aaKnown RBP10.85□□□□□ -0.67
TRIM41-209ENST00000515834 EIF1ADQ8N9N8 165 aaKnown RBP10.85□□□□□ -0.67
TRIM41-209ENST00000515834 ANKRD7Q92527 254 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 SNX27Q96L92 541 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 GORASP1Q9BQQ3 440 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 WDR55Q9H6Y2 383 aaPredicted RBP10.85□□□□□ -0.67
TRIM41-209ENST00000515834 H3BSH0 61 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 SNAP91O60641 907 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 CPNE3O75131 537 aaKnown RBP10.85□□□□□ -0.67
TRIM41-209ENST00000515834 CILPO75339 1184 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 MTX2O75431 263 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 ALPPP05187 535 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 SPATA31C1P0DKV0 1188 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 TM4SF1P30408 202 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 KHKP50053 298 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 YBEYP58557 167 aaPredicted RBP10.85□□□□□ -0.67
TRIM41-209ENST00000515834 TMEM63BQ5T3F8 832 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 TNFAIP8L2Q6P589 184 aaPredicted RBP10.85□□□□□ -0.67
TRIM41-209ENST00000515834 SYVN1Q86TM6 617 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 ECHDC2Q86YB7 292 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 TREML1Q86YW5 311 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 CELF5Q8N6W0 485 aaKnown RBP10.85□□□□□ -0.67
TRIM41-209ENST00000515834 B3GNT4Q9C0J1 378 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 SMG9Q9H0W8 520 aaKnown RBP10.85□□□□□ -0.67
TRIM41-209ENST00000515834 BRF2Q9HAW0 419 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 TFECO14948 347 aaPredicted RBP10.85□□□□□ -0.67
TRIM41-209ENST00000515834 AP5Z1O43299 807 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 OR1I1O60431 355 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 NME6O75414 186 aaPredicted RBP10.85□□□□□ -0.67
TRIM41-209ENST00000515834 IPO13O94829 963 aaKnown RBP10.85□□□□□ -0.67
TRIM41-209ENST00000515834 CCR8P51685 355 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 LILRA4P59901 499 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 GLYATQ6IB77 296 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 NOXRED1Q6NXP6 359 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 CPSF7Q8N684 471 aaKnown RBP10.85□□□□□ -0.67
TRIM41-209ENST00000515834 ZNF615Q8N8J6 731 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 C11orf65Q8NCR3 313 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 OR4E2Q8NGC2 313 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 MTERF1Q99551 399 aaKnown RBP10.85□□□□□ -0.67
TRIM41-209ENST00000515834 EIF2B4Q9UI10 523 aaKnown RBP10.85□□□□□ -0.67
TRIM41-209ENST00000515834 CYP8B1Q9UNU6 501 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 HEXBP07686 556 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 ZNF806P0C7X5 589 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 IL12AP29459 219 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 PDK4Q16654 411 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 ABCA11PQ4W5N1 156 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 NET1Q7Z628 596 aaPredicted RBP10.85□□□□□ -0.67
TRIM41-209ENST00000515834 CLIP4Q8N3C7 705 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 OR10Q1Q8NGQ4 319 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 ESAMQ96AP7 390 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 WDR77Q9BQA1 342 aaPredicted RBP10.85□□□□□ -0.67
TRIM41-209ENST00000515834 RIOK2Q9BVS4 552 aaKnown RBP10.85□□□□□ -0.67
TRIM41-209ENST00000515834 CALML5Q9NZT1 146 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 MAGEL2Q9UJ55 1249 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 TESMINQ9Y4I5 508 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 ADAMTS13Q76LX8 1427 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 H3BQF6 201 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 BPNT1O95861 308 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 CSN2P05814 226 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 CYP3A5P20815 502 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 MAGP20916 626 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 CCNCP24863 283 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 CLCNKAP51800 687 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 DRG2P55039 364 aaKnown RBP10.85□□□□□ -0.67
TRIM41-209ENST00000515834 SIM2Q14190 667 aaPredicted RBP10.85□□□□□ -0.67
TRIM41-209ENST00000515834 ZNF460Q14592 562 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 ZNF570Q96NI8 536 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 CHID1Q9BWS9 393 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 EBF3Q9H4W6 596 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 GPN1Q9HCN4 374 aaPredicted RBP10.85□□□□□ -0.67
TRIM41-209ENST00000515834 SDHAF3Q9NRP4 125 aa10.85□□□□□ -0.67
TRIM41-209ENST00000515834 A0A1W2PPM1 405 aa10.84□□□□□ -0.67
TRIM41-209ENST00000515834 LOC110117498-PIK3R3F6TDL0 507 aa10.84□□□□□ -0.67
TRIM41-209ENST00000515834 C8GP07360 202 aa10.84□□□□□ -0.67
TRIM41-209ENST00000515834 PDSS1Q5T2R2 415 aa10.84□□□□□ -0.67
TRIM41-209ENST00000515834 LBX2Q6XYB7 198 aa10.84□□□□□ -0.67
TRIM41-209ENST00000515834 MSANTD1Q6ZTZ1 278 aa10.84□□□□□ -0.67
TRIM41-209ENST00000515834 CEP97Q8IW35 865 aa10.84□□□□□ -0.67
TRIM41-209ENST00000515834 CKAP2Q8WWK9 683 aa10.84□□□□□ -0.67
TRIM41-209ENST00000515834 PIK3R3Q92569 461 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms