RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 OPA3Q9H6K4 179 aa4.82□□□□□ -1.64
HMGCS1-207ENST00000514610 NOL11Q9H8H0 719 aaKnown RBP4.82□□□□□ -1.64
HMGCS1-207ENST00000514610 APOBEC3GQ9HC16 384 aaKnown RBP4.82□□□□□ -1.64
HMGCS1-207ENST00000514610 ZFP57Q9NU63 452 aa4.82□□□□□ -1.64
HMGCS1-207ENST00000514610 TAAR2Q9P1P5 351 aa4.82□□□□□ -1.64
HMGCS1-207ENST00000514610 CFDP1Q9UEE9 299 aaPredicted RBP4.82□□□□□ -1.64
HMGCS1-207ENST00000514610 DDX25Q9UHL0 483 aaKnown RBP4.82□□□□□ -1.64
HMGCS1-207ENST00000514610 OSGIN1Q9UJX0 560 aa4.82□□□□□ -1.64
HMGCS1-207ENST00000514610 ZHX1Q9UKY1 873 aaPredicted RBP4.82□□□□□ -1.64
HMGCS1-207ENST00000514610 SCN5AQ14524 2016 aa4.81□□□□□ -1.64
HMGCS1-207ENST00000514610 TRIM77I1YAP6 450 aa4.81□□□□□ -1.64
HMGCS1-207ENST00000514610 DIAPH2O60879 1101 aa4.81□□□□□ -1.64
HMGCS1-207ENST00000514610 GGPS1O95749 300 aa4.81□□□□□ -1.64
HMGCS1-207ENST00000514610 H1F0P07305 194 aaKnown RBP4.81□□□□□ -1.64
HMGCS1-207ENST00000514610 MSH3P20585 1137 aa4.81□□□□□ -1.64
HMGCS1-207ENST00000514610 HOXA1P49639 335 aaPredicted RBP4.81□□□□□ -1.64
HMGCS1-207ENST00000514610 RAD23AP54725 363 aa4.81□□□□□ -1.64
HMGCS1-207ENST00000514610 C1orf141Q5JVX7 400 aa4.81□□□□□ -1.64
HMGCS1-207ENST00000514610 CENPVQ7Z7K6 275 aaPredicted RBP4.81□□□□□ -1.64
HMGCS1-207ENST00000514610 IQCHQ86VS3 1027 aa4.81□□□□□ -1.64
HMGCS1-207ENST00000514610 Q8NFD4 153 aa4.81□□□□□ -1.64
HMGCS1-207ENST00000514610 DMBX1Q8NFW5 382 aa4.81□□□□□ -1.64
HMGCS1-207ENST00000514610 EXD1Q8NHP7 514 aa4.81□□□□□ -1.64
HMGCS1-207ENST00000514610 OLIG1Q8TAK6 271 aa4.81□□□□□ -1.64
HMGCS1-207ENST00000514610 ZNF473Q8WTR7 871 aaKnown RBP4.81□□□□□ -1.64
HMGCS1-207ENST00000514610 VPS33AQ96AX1 596 aa4.81□□□□□ -1.64
HMGCS1-207ENST00000514610 ARSGQ96EG1 525 aa4.81□□□□□ -1.64
HMGCS1-207ENST00000514610 LMF2Q9BU23 707 aaKnown RBP4.81□□□□□ -1.64
HMGCS1-207ENST00000514610 VN1R1Q9GZP7 353 aa4.81□□□□□ -1.64
HMGCS1-207ENST00000514610 WNT5BQ9H1J7 359 aa4.81□□□□□ -1.64
HMGCS1-207ENST00000514610 SLC38A7Q9NVC3 462 aa4.81□□□□□ -1.64
HMGCS1-207ENST00000514610 FAF1Q9UNN5 650 aaPredicted RBP4.81□□□□□ -1.64
HMGCS1-207ENST00000514610 CCL27Q9Y4X3 112 aa4.81□□□□□ -1.64
HMGCS1-207ENST00000514610 MED19A0JLT2 244 aaPredicted RBP4.8□□□□□ -1.64
HMGCS1-207ENST00000514610 HYKKA2RU49 373 aa4.8□□□□□ -1.64
HMGCS1-207ENST00000514610 H7C0S8 307 aa4.8□□□□□ -1.64
HMGCS1-207ENST00000514610 TCERG1O14776 1098 aaKnown RBP4.8□□□□□ -1.64
HMGCS1-207ENST00000514610 IPO8O15397 1037 aaKnown RBP4.8□□□□□ -1.64
HMGCS1-207ENST00000514610 PRKNO60260 465 aaPredicted RBP4.8□□□□□ -1.64
HMGCS1-207ENST00000514610 TSPAN1O60635 241 aa4.8□□□□□ -1.64
HMGCS1-207ENST00000514610 KRT36O76013 467 aa4.8□□□□□ -1.64
HMGCS1-207ENST00000514610 CELF2O95319 508 aaKnown RBP4.8□□□□□ -1.64
HMGCS1-207ENST00000514610 MPZP25189 248 aa4.8□□□□□ -1.64
HMGCS1-207ENST00000514610 TERF1P54274 439 aa4.8□□□□□ -1.64
HMGCS1-207ENST00000514610 DVL1P1P54792 670 aaPredicted RBP4.8□□□□□ -1.64
HMGCS1-207ENST00000514610 VWC2Q2TAL6 325 aa4.8□□□□□ -1.64
HMGCS1-207ENST00000514610 TCP11X2Q5H9J9 407 aa4.8□□□□□ -1.64
HMGCS1-207ENST00000514610 MDH1BQ5I0G3 518 aa4.8□□□□□ -1.64
HMGCS1-207ENST00000514610 KRBOX4Q5JUW0 171 aa4.8□□□□□ -1.64
HMGCS1-207ENST00000514610 FAM198BQ6UWH4 519 aa4.8□□□□□ -1.64
HMGCS1-207ENST00000514610 LINGO4Q6UY18 593 aa4.8□□□□□ -1.64
HMGCS1-207ENST00000514610 C18orf65Q6ZTR6 163 aa4.8□□□□□ -1.64
HMGCS1-207ENST00000514610 PI4KAP1Q8N8J0 262 aa4.8□□□□□ -1.64
HMGCS1-207ENST00000514610 RNF128Q8TEB7 428 aa4.8□□□□□ -1.64
HMGCS1-207ENST00000514610 SCRN2Q96FV2 425 aa4.8□□□□□ -1.64
HMGCS1-207ENST00000514610 ST6GAL2Q96JF0 529 aa4.8□□□□□ -1.64
HMGCS1-207ENST00000514610 BTBD10Q9BSF8 475 aa4.8□□□□□ -1.64
HMGCS1-207ENST00000514610 TRMT61BQ9BVS5 477 aaKnown RBP4.8□□□□□ -1.64
HMGCS1-207ENST00000514610 Q9N2K0 584 aa4.8□□□□□ -1.64
HMGCS1-207ENST00000514610 IL17BQ9UHF5 180 aa4.8□□□□□ -1.64
HMGCS1-207ENST00000514610 GRIP1Q9Y3R0 1128 aa4.8□□□□□ -1.64
HMGCS1-207ENST00000514610 BMPR1BO00238 502 aa4.79□□□□□ -1.64
HMGCS1-207ENST00000514610 WDPCPO95876 746 aa4.79□□□□□ -1.64
HMGCS1-207ENST00000514610 CRYAAP02489 173 aa4.79□□□□□ -1.64
HMGCS1-207ENST00000514610 APOA4P06727 396 aa4.79□□□□□ -1.64
HMGCS1-207ENST00000514610 CYP11B2P19099 503 aa4.79□□□□□ -1.64
HMGCS1-207ENST00000514610 POU3F1Q03052 451 aaPredicted RBP4.79□□□□□ -1.64
HMGCS1-207ENST00000514610 HSPB3Q12988 150 aa4.79□□□□□ -1.64
HMGCS1-207ENST00000514610 CAMK2DQ13557 499 aa4.79□□□□□ -1.64
HMGCS1-207ENST00000514610 RBBP5Q15291 538 aaKnown RBP4.79□□□□□ -1.64
HMGCS1-207ENST00000514610 KRT80Q6KB66 452 aa4.79□□□□□ -1.64
HMGCS1-207ENST00000514610 TMPRSS11BQ86T26 416 aa4.79□□□□□ -1.64
HMGCS1-207ENST00000514610 GPALPP1Q8IXQ4 340 aa4.79□□□□□ -1.64
HMGCS1-207ENST00000514610 ARHGAP24Q8N264 748 aa4.79□□□□□ -1.64
HMGCS1-207ENST00000514610 METTL27Q8N6F8 245 aaPredicted RBP4.79□□□□□ -1.64
HMGCS1-207ENST00000514610 FGFBP3Q8TAT2 258 aa4.79□□□□□ -1.64
HMGCS1-207ENST00000514610 RMDN1Q96DB5 314 aa4.79□□□□□ -1.64
HMGCS1-207ENST00000514610 CFAP57Q96MR6 1250 aa4.79□□□□□ -1.64
HMGCS1-207ENST00000514610 AP1M1Q9BXS5 423 aa4.79□□□□□ -1.64
HMGCS1-207ENST00000514610 FAM129AQ9BZQ8 928 aa4.79□□□□□ -1.64
HMGCS1-207ENST00000514610 ARRDC1-AS1Q9H2J1 176 aa4.79□□□□□ -1.64
HMGCS1-207ENST00000514610 TFB2MQ9H5Q4 396 aaKnown RBP4.79□□□□□ -1.64
HMGCS1-207ENST00000514610 MYNNQ9NPC7 610 aa4.79□□□□□ -1.64
HMGCS1-207ENST00000514610 TCF7L2Q9NQB0 619 aa4.79□□□□□ -1.64
HMGCS1-207ENST00000514610 SLC24A2Q9UI40 661 aa4.79□□□□□ -1.64
HMGCS1-207ENST00000514610 NME7Q9Y5B8 376 aa4.79□□□□□ -1.64
HMGCS1-207ENST00000514610 GREB1LQ9C091 1923 aaPredicted RBP4.78□□□□□ -1.64
HMGCS1-207ENST00000514610 IFITM10A6NMD0 228 aa4.78□□□□□ -1.64
HMGCS1-207ENST00000514610 PRR32B1ATL7 298 aa4.78□□□□□ -1.64
HMGCS1-207ENST00000514610 PTGESO14684 152 aa4.78□□□□□ -1.64
HMGCS1-207ENST00000514610 MEIS2O14770 477 aa4.78□□□□□ -1.64
HMGCS1-207ENST00000514610 ATP1A1P05023 1023 aaKnown RBP4.78□□□□□ -1.64
HMGCS1-207ENST00000514610 FYNP06241 537 aa4.78□□□□□ -1.64
HMGCS1-207ENST00000514610 EEF1DP29692 281 aaKnown RBP4.78□□□□□ -1.64
HMGCS1-207ENST00000514610 DCTP40126 519 aa4.78□□□□□ -1.64
HMGCS1-207ENST00000514610 DMPKQ09013 629 aa4.78□□□□□ -1.64
HMGCS1-207ENST00000514610 ASPRV1Q53RT3 343 aa4.78□□□□□ -1.64
HMGCS1-207ENST00000514610 CST9LP1Q5W188 147 aa4.78□□□□□ -1.64
HMGCS1-207ENST00000514610 GDPD4Q6W3E5 623 aa4.78□□□□□ -1.64
HMGCS1-207ENST00000514610 TRIML1Q8N9V2 468 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms