RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-223ENST00000514267 ZBTB49Q6ZSB9 765 aa3.32□□□□□ -1.88
CALCOCO2-223ENST00000514267 GPR180Q86V85 440 aa3.32□□□□□ -1.88
CALCOCO2-223ENST00000514267 C4orf19Q8IY42 314 aa3.32□□□□□ -1.88
CALCOCO2-223ENST00000514267 CTCFLQ8NI51 663 aaPredicted RBP3.32□□□□□ -1.88
CALCOCO2-223ENST00000514267 GRAPLQ8TC17 118 aaPredicted RBP3.32□□□□□ -1.88
CALCOCO2-223ENST00000514267 UTP15Q8TED0 518 aaKnown RBP3.32□□□□□ -1.88
CALCOCO2-223ENST00000514267 CCDC47Q96A33 483 aaKnown RBP3.32□□□□□ -1.88
CALCOCO2-223ENST00000514267 HES6Q96HZ4 224 aa3.32□□□□□ -1.88
CALCOCO2-223ENST00000514267 MUS81Q96NY9 551 aa3.32□□□□□ -1.88
CALCOCO2-223ENST00000514267 FZD8Q9H461 694 aa3.32□□□□□ -1.88
CALCOCO2-223ENST00000514267 HHATLQ9HCP6 504 aa3.32□□□□□ -1.88
CALCOCO2-223ENST00000514267 ABCB8Q9NUT2 735 aa3.32□□□□□ -1.88
CALCOCO2-223ENST00000514267 CWC25Q9NXE8 425 aaPredicted RBP3.32□□□□□ -1.88
CALCOCO2-223ENST00000514267 CACNG4Q9UBN1 327 aa3.32□□□□□ -1.88
CALCOCO2-223ENST00000514267 TINAGQ9UJW2 476 aa3.32□□□□□ -1.88
CALCOCO2-223ENST00000514267 LOXL2Q9Y4K0 774 aa3.32□□□□□ -1.88
CALCOCO2-223ENST00000514267 NFS1Q9Y697 457 aa3.32□□□□□ -1.88
CALCOCO2-223ENST00000514267 GPRASP1Q5JY77 1395 aa3.32□□□□□ -1.88
CALCOCO2-223ENST00000514267 ARHGAP35Q9NRY4 1499 aa3.32□□□□□ -1.88
CALCOCO2-223ENST00000514267 TOPBP1Q92547 1522 aa3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 FHAD1B1AJZ9 1412 aa3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 CCNB3Q8WWL7 1395 aa3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 HEPACAM2A8MVW5 462 aa3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 DDX39AO00148 427 aaKnown RBP3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 TO15178 435 aa3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 BUD23O43709 281 aaKnown RBP3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 CH25HO95992 272 aa3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 LCATP04180 440 aa3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 FAM58BPP0C7Q3 252 aa3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 OR2T7P0C7T2 308 aa3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 SOAT1P35610 550 aa3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 AMTP48728 403 aa3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 AMPHP49418 695 aa3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 STX1BP61266 288 aa3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 POU3F1Q03052 451 aaPredicted RBP3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 CRYZQ08257 329 aaKnown RBP3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 MZT1Q08AG7 82 aa3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 FAM174BQ3ZCQ3 159 aa3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 FUT11Q495W5 492 aa3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 RAB6CQ53S08 254 aa3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 KCNT1Q5JUK3 1230 aa3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 EFHC1Q5JVL4 640 aa3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 NADSYN1Q6IA69 706 aa3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 Q6ZTK2 550 aa3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 ATG9AQ7Z3C6 839 aa3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 HOOK3Q86VS8 718 aa3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 TUSC5Q8IXB3 177 aa3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 ZNF611Q8N823 705 aa3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 ARL10Q8N8L6 244 aa3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 NAT8LQ8N9F0 302 aa3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 MIGA1Q8NAN2 632 aa3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 OR8H1Q8NGG4 311 aa3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 PPP4R1Q8TF05 950 aa3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 ASB5Q8WWX0 329 aa3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 OIT3Q8WWZ8 545 aa3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 DNASE1L2Q92874 299 aa3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 EXOC4Q96A65 974 aa3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 SPDL1Q96EA4 605 aa3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 URB1-AS1Q96HZ7 61 aa3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 PRMT6Q96LA8 375 aaPredicted RBP3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 QRFPRQ96P65 431 aa3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 INTS14Q96SY0 518 aa3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 FEVQ99581 238 aa3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 OLFM1Q99784 485 aa3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 RAB6CQ9H0N0 254 aa3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 MMADHCQ9H3L0 296 aaPredicted RBP3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 C6orf106Q9H6K1 298 aaPredicted RBP3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 VPS18Q9P253 973 aa3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 ARMCX3Q9UH62 379 aaPredicted RBP3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 AGO1Q9UL18 857 aaKnown RBP3.31□□□□□ -1.88
CALCOCO2-223ENST00000514267 LAMC3Q9Y6N6 1575 aa3.3□□□□□ -1.88
CALCOCO2-223ENST00000514267 POLA1P09884 1462 aaPredicted RBP3.3□□□□□ -1.88
CALCOCO2-223ENST00000514267 A0A1W2PP11 408 aa3.3□□□□□ -1.88
CALCOCO2-223ENST00000514267 DENND3A2RUS2 1198 aa3.3□□□□□ -1.88
CALCOCO2-223ENST00000514267 GTPBP10A4D1E9 387 aaKnown RBP3.3□□□□□ -1.88
CALCOCO2-223ENST00000514267 TMEM221A6NGB7 291 aa3.3□□□□□ -1.88
CALCOCO2-223ENST00000514267 C5orf52A6NGY3 159 aa3.3□□□□□ -1.88
CALCOCO2-223ENST00000514267 C15orf62A8K5M9 175 aa3.3□□□□□ -1.88
CALCOCO2-223ENST00000514267 SLC33A1O00400 549 aaPredicted RBP3.3□□□□□ -1.88
CALCOCO2-223ENST00000514267 RTN2O75298 545 aa3.3□□□□□ -1.88
CALCOCO2-223ENST00000514267 RFPL2O75678 378 aa3.3□□□□□ -1.88
CALCOCO2-223ENST00000514267 SLC22A3O75751 556 aa3.3□□□□□ -1.88
CALCOCO2-223ENST00000514267 MOCS3O95396 460 aa3.3□□□□□ -1.88
CALCOCO2-223ENST00000514267 PNPP00491 289 aa3.3□□□□□ -1.88
CALCOCO2-223ENST00000514267 LDLRP01130 860 aa3.3□□□□□ -1.88
CALCOCO2-223ENST00000514267 THEGLP0DJG4 465 aa3.3□□□□□ -1.88
CALCOCO2-223ENST00000514267 EEF2P13639 858 aaKnown RBP3.3□□□□□ -1.88
CALCOCO2-223ENST00000514267 PTPN3P26045 913 aa3.3□□□□□ -1.88
CALCOCO2-223ENST00000514267 GABRA5P31644 462 aa3.3□□□□□ -1.88
CALCOCO2-223ENST00000514267 ATP6V1E1P36543 226 aa3.3□□□□□ -1.88
CALCOCO2-223ENST00000514267 PRKCIP41743 596 aa3.3□□□□□ -1.88
CALCOCO2-223ENST00000514267 CASP3P42574 277 aa3.3□□□□□ -1.88
CALCOCO2-223ENST00000514267 ART1P52961 327 aa3.3□□□□□ -1.88
CALCOCO2-223ENST00000514267 SNU13P55769 128 aaKnown RBP3.3□□□□□ -1.88
CALCOCO2-223ENST00000514267 CLDN20P56880 219 aa3.3□□□□□ -1.88
CALCOCO2-223ENST00000514267 SEC61A1P61619 476 aaKnown RBP3.3□□□□□ -1.88
CALCOCO2-223ENST00000514267 HNRNPKP61978 463 aaKnown RBP eCLIP3.3□□□□□ -1.88
CALCOCO2-223ENST00000514267 ASIC1P78348 528 aa3.3□□□□□ -1.88
CALCOCO2-223ENST00000514267 TRAF1Q13077 416 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms