RNA–Protein interactions for RNA: ENST00000513438.1

POLR2J3-217, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3 BASIC

Gene POLR2J3, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-217ENST00000513438 EFCAB3Q8N7B9 438 aa13□□□□□ -0.33
POLR2J3-217ENST00000513438 ENDOVQ8N8Q3 282 aaKnown RBP13□□□□□ -0.33
POLR2J3-217ENST00000513438 OR1L3Q8NH93 324 aa13□□□□□ -0.33
POLR2J3-217ENST00000513438 CCDC110Q8TBZ0 833 aa13□□□□□ -0.33
POLR2J3-217ENST00000513438 ADAMTS17Q8TE56 1095 aa13□□□□□ -0.33
POLR2J3-217ENST00000513438 HEXDCQ8WVB3 486 aa13□□□□□ -0.33
POLR2J3-217ENST00000513438 TBL1YQ9BQ87 522 aa13□□□□□ -0.33
POLR2J3-217ENST00000513438 NLNQ9BYT8 704 aa13□□□□□ -0.33
POLR2J3-217ENST00000513438 OSBPL8Q9BZF1 889 aa13□□□□□ -0.33
POLR2J3-217ENST00000513438 OR52A5Q9H2C5 316 aa13□□□□□ -0.33
POLR2J3-217ENST00000513438 COG4Q9H9E3 785 aa13□□□□□ -0.33
POLR2J3-217ENST00000513438 FANCEQ9HB96 536 aa13□□□□□ -0.33
POLR2J3-217ENST00000513438 ARNT2Q9HBZ2 717 aa13□□□□□ -0.33
POLR2J3-217ENST00000513438 SYTL2Q9HCH5 934 aa13□□□□□ -0.33
POLR2J3-217ENST00000513438 ZDHHC3Q9NYG2 299 aa13□□□□□ -0.33
POLR2J3-217ENST00000513438 VPS4AQ9UN37 437 aa13□□□□□ -0.33
POLR2J3-217ENST00000513438 SNX7Q9UNH6 387 aa13□□□□□ -0.33
POLR2J3-217ENST00000513438 EFR3BQ9Y2G0 817 aa13□□□□□ -0.33
POLR2J3-217ENST00000513438 USP9YO00507 2555 aaPredicted RBP13□□□□□ -0.33
POLR2J3-217ENST00000513438 RP1L1Q8IWN7 2480 aaPredicted RBP13□□□□□ -0.33
POLR2J3-217ENST00000513438 MATN2O00339 956 aa12.99□□□□□ -0.33
POLR2J3-217ENST00000513438 IFRD1O00458 451 aaPredicted RBP12.99□□□□□ -0.33
POLR2J3-217ENST00000513438 BTN3A1O00481 513 aa12.99□□□□□ -0.33
POLR2J3-217ENST00000513438 LDB2O43679 373 aa12.99□□□□□ -0.33
POLR2J3-217ENST00000513438 AGFG2O95081 481 aa12.99□□□□□ -0.33
POLR2J3-217ENST00000513438 CAPN1P07384 714 aa12.99□□□□□ -0.33
POLR2J3-217ENST00000513438 ST6GAL1P15907 406 aa12.99□□□□□ -0.33
POLR2J3-217ENST00000513438 GNLYP22749 145 aa12.99□□□□□ -0.33
POLR2J3-217ENST00000513438 MC4RP32245 332 aa12.99□□□□□ -0.33
POLR2J3-217ENST00000513438 CTNNA1P35221 906 aaKnown RBP12.99□□□□□ -0.33
POLR2J3-217ENST00000513438 RORAP35398 523 aa12.99□□□□□ -0.33
POLR2J3-217ENST00000513438 UQCRFS1P47985 274 aa12.99□□□□□ -0.33
POLR2J3-217ENST00000513438 LMAN1P49257 510 aa12.99□□□□□ -0.33
POLR2J3-217ENST00000513438 ZNF140P52738 457 aaPredicted RBP12.99□□□□□ -0.33
POLR2J3-217ENST00000513438 PRKG2Q13237 762 aa12.99□□□□□ -0.33
POLR2J3-217ENST00000513438 GPR33Q49SQ1 333 aa12.99□□□□□ -0.33
POLR2J3-217ENST00000513438 ZRANB3Q5FWF4 1079 aa12.99□□□□□ -0.33
POLR2J3-217ENST00000513438 AADACL2Q6P093 401 aa12.99□□□□□ -0.33
POLR2J3-217ENST00000513438 SERPINA9Q86WD7 417 aa12.99□□□□□ -0.33
POLR2J3-217ENST00000513438 CCDC170Q8IYT3 715 aa12.99□□□□□ -0.33
POLR2J3-217ENST00000513438 OR52E1Q8NGJ3 308 aa12.99□□□□□ -0.33
POLR2J3-217ENST00000513438 CPT1CQ8TCG5 803 aa12.99□□□□□ -0.33
POLR2J3-217ENST00000513438 SPATA13Q96N96 652 aa12.99□□□□□ -0.33
POLR2J3-217ENST00000513438 TRAPPC9Q96Q05 1148 aa12.99□□□□□ -0.33
POLR2J3-217ENST00000513438 C19orf43Q9BQ61 176 aa12.99□□□□□ -0.33
POLR2J3-217ENST00000513438 KLHL25Q9H0H3 589 aa12.99□□□□□ -0.33
POLR2J3-217ENST00000513438 TFB2MQ9H5Q4 396 aaKnown RBP12.99□□□□□ -0.33
POLR2J3-217ENST00000513438 ACTR5Q9H9F9 607 aaPredicted RBP12.99□□□□□ -0.33
POLR2J3-217ENST00000513438 PCMTD2Q9NV79 361 aa12.99□□□□□ -0.33
POLR2J3-217ENST00000513438 SERTAD3Q9UJW9 196 aa12.99□□□□□ -0.33
POLR2J3-217ENST00000513438 TCFL5Q9UL49 500 aa12.99□□□□□ -0.33
POLR2J3-217ENST00000513438 USP9XQ93008 2570 aaPredicted RBP12.99□□□□□ -0.33
POLR2J3-217ENST00000513438 IGLV3-16A0A075B6K0 115 aa12.98□□□□□ -0.33
POLR2J3-217ENST00000513438 TRBV5-4A0A0C4DH59 114 aa12.98□□□□□ -0.33
POLR2J3-217ENST00000513438 RCCD1A6NED2 376 aa12.98□□□□□ -0.33
POLR2J3-217ENST00000513438 ZNF185O15231 689 aa12.98□□□□□ -0.33
POLR2J3-217ENST00000513438 PJA2O43164 708 aa12.98□□□□□ -0.33
POLR2J3-217ENST00000513438 MAP3K7O43318 606 aa12.98□□□□□ -0.33
POLR2J3-217ENST00000513438 TMEM63AO94886 807 aa12.98□□□□□ -0.33
POLR2J3-217ENST00000513438 PRSS56P0CW18 603 aa12.98□□□□□ -0.33
POLR2J3-217ENST00000513438 PVRP15151 417 aa12.98□□□□□ -0.33
POLR2J3-217ENST00000513438 TPH1P17752 444 aa12.98□□□□□ -0.33
POLR2J3-217ENST00000513438 CYP2A7P20853 494 aa12.98□□□□□ -0.33
POLR2J3-217ENST00000513438 CYLC1P35663 651 aaPredicted RBP12.98□□□□□ -0.33
POLR2J3-217ENST00000513438 CD151P48509 253 aa12.98□□□□□ -0.33
POLR2J3-217ENST00000513438 NAP1L1P55209 391 aaKnown RBP12.98□□□□□ -0.33
POLR2J3-217ENST00000513438 ZNF658BQ4V348 819 aaPredicted RBP12.98□□□□□ -0.33
POLR2J3-217ENST00000513438 ZNF789Q5FWF6 425 aa12.98□□□□□ -0.33
POLR2J3-217ENST00000513438 PAPD7Q5XG87 772 aaKnown RBP12.98□□□□□ -0.33
POLR2J3-217ENST00000513438 HIST2H2BCQ6DN03 193 aa12.98□□□□□ -0.33
POLR2J3-217ENST00000513438 ZNF449Q6P9G9 518 aa12.98□□□□□ -0.33
POLR2J3-217ENST00000513438 TAS2R42Q7RTR8 314 aa12.98□□□□□ -0.33
POLR2J3-217ENST00000513438 AMIGO1Q86WK6 493 aa12.98□□□□□ -0.33
POLR2J3-217ENST00000513438 ADGRF3Q8IZF5 1079 aa12.98□□□□□ -0.33
POLR2J3-217ENST00000513438 CLDN19Q8N6F1 224 aa12.98□□□□□ -0.33
POLR2J3-217ENST00000513438 GALNT11Q8NCW6 608 aa12.98□□□□□ -0.33
POLR2J3-217ENST00000513438 TFGQ92734 400 aaPredicted RBP12.98□□□□□ -0.33
POLR2J3-217ENST00000513438 DNAJC1Q96KC8 554 aaKnown RBP12.98□□□□□ -0.33
POLR2J3-217ENST00000513438 TRIM5Q9C035 493 aa12.98□□□□□ -0.33
POLR2J3-217ENST00000513438 SLC7A5P2Q9GIP4 190 aa12.98□□□□□ -0.33
POLR2J3-217ENST00000513438 XKR8Q9H6D3 395 aa12.98□□□□□ -0.33
POLR2J3-217ENST00000513438 MVB12BQ9H7P6 319 aa12.98□□□□□ -0.33
POLR2J3-217ENST00000513438 LUC7LQ9NQ29 371 aaKnown RBP12.98□□□□□ -0.33
POLR2J3-217ENST00000513438 ZNF451Q9Y4E5 1061 aa12.98□□□□□ -0.33
POLR2J3-217ENST00000513438 EPN1Q9Y6I3 576 aaPredicted RBP12.98□□□□□ -0.33
POLR2J3-217ENST00000513438 DUSP10Q9Y6W6 482 aa12.98□□□□□ -0.33
POLR2J3-217ENST00000513438 A6NL46 340 aa12.97□□□□□ -0.33
POLR2J3-217ENST00000513438 C2orf74A8MZ97 194 aa12.97□□□□□ -0.33
POLR2J3-217ENST00000513438 ZNF749O43361 778 aa12.97□□□□□ -0.33
POLR2J3-217ENST00000513438 CEACAM4O75871 244 aa12.97□□□□□ -0.33
POLR2J3-217ENST00000513438 TJP3O95049 919 aa12.97□□□□□ -0.33
POLR2J3-217ENST00000513438 MSL3P1P0C860 447 aa12.97□□□□□ -0.33
POLR2J3-217ENST00000513438 ACRV1P26436 265 aa12.97□□□□□ -0.33
POLR2J3-217ENST00000513438 PTPN7P35236 360 aa12.97□□□□□ -0.33
POLR2J3-217ENST00000513438 CETN2P41208 172 aa12.97□□□□□ -0.33
POLR2J3-217ENST00000513438 VAV2P52735 878 aa12.97□□□□□ -0.33
POLR2J3-217ENST00000513438 ITGA1P56199 1179 aa12.97□□□□□ -0.33
POLR2J3-217ENST00000513438 RWDD2BP57060 319 aa12.97□□□□□ -0.33
POLR2J3-217ENST00000513438 RPA4Q13156 261 aa12.97□□□□□ -0.33
POLR2J3-217ENST00000513438 BOP1Q14137 746 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms