RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 CCNFP41002 786 aa12.28□□□□□ -0.44
COL11A1-210ENST00000512756 DAG1Q14118 895 aa12.28□□□□□ -0.44
COL11A1-210ENST00000512756 SMCO1Q147U7 214 aa12.28□□□□□ -0.44
COL11A1-210ENST00000512756 CLEC20AQ6ZU45 233 aa12.28□□□□□ -0.44
COL11A1-210ENST00000512756 MYOCQ99972 504 aa12.28□□□□□ -0.44
COL11A1-210ENST00000512756 DUSP26Q9BV47 211 aa12.28□□□□□ -0.44
COL11A1-210ENST00000512756 SLC35C2Q9NQQ7 365 aa12.28□□□□□ -0.44
COL11A1-210ENST00000512756 TAS2R7Q9NYW3 318 aa12.28□□□□□ -0.44
COL11A1-210ENST00000512756 WRAP73Q9P2S5 460 aaPredicted RBP12.28□□□□□ -0.44
COL11A1-210ENST00000512756 REM1O75628 298 aa12.28□□□□□ -0.44
COL11A1-210ENST00000512756 KLHL22Q53GT1 634 aa12.28□□□□□ -0.44
COL11A1-210ENST00000512756 RBM48Q5RL73 367 aaKnown RBP12.28□□□□□ -0.44
COL11A1-210ENST00000512756 FBXO42Q6P3S6 717 aa12.28□□□□□ -0.44
COL11A1-210ENST00000512756 PTF1AQ7RTS3 328 aa12.28□□□□□ -0.44
COL11A1-210ENST00000512756 CLEC4CQ8WTT0 213 aa12.28□□□□□ -0.44
COL11A1-210ENST00000512756 SNX33Q8WV41 574 aa12.28□□□□□ -0.44
COL11A1-210ENST00000512756 TMCO6Q96DC7 493 aa12.28□□□□□ -0.44
COL11A1-210ENST00000512756 HBEGFQ99075 208 aa12.28□□□□□ -0.44
COL11A1-210ENST00000512756 COPS4Q9BT78 406 aa12.28□□□□□ -0.44
COL11A1-210ENST00000512756 DNAJC5Q9H3Z4 198 aa12.28□□□□□ -0.44
COL11A1-210ENST00000512756 ABCB9Q9NP78 766 aa12.28□□□□□ -0.44
COL11A1-210ENST00000512756 CIDEBQ9UHD4 219 aa12.28□□□□□ -0.44
COL11A1-210ENST00000512756 PRORSD1PA6NEY8 169 aa12.28□□□□□ -0.44
COL11A1-210ENST00000512756 TBX10O75333 385 aa12.28□□□□□ -0.44
COL11A1-210ENST00000512756 RLN1P04808 185 aa12.28□□□□□ -0.44
COL11A1-210ENST00000512756 IFNA6P05013 189 aa12.28□□□□□ -0.44
COL11A1-210ENST00000512756 PRPS1L1P21108 318 aa12.28□□□□□ -0.44
COL11A1-210ENST00000512756 STXBP1P61764 594 aaKnown RBP12.28□□□□□ -0.44
COL11A1-210ENST00000512756 FOXM1Q08050 763 aa12.28□□□□□ -0.44
COL11A1-210ENST00000512756 CIR1Q86X95 450 aaPredicted RBP12.28□□□□□ -0.44
COL11A1-210ENST00000512756 TMEM192Q8IY95 271 aa12.28□□□□□ -0.44
COL11A1-210ENST00000512756 POLR3BQ9NW08 1133 aaPredicted RBP12.28□□□□□ -0.44
COL11A1-210ENST00000512756 TMA7Q9Y2S6 64 aaKnown RBP12.28□□□□□ -0.44
COL11A1-210ENST00000512756 CLDN4O14493 209 aa12.28□□□□□ -0.44
COL11A1-210ENST00000512756 SLC35G6P0C7Q6 338 aa12.28□□□□□ -0.44
COL11A1-210ENST00000512756 NT5EP21589 574 aa12.28□□□□□ -0.44
COL11A1-210ENST00000512756 IGFALSP35858 605 aa12.28□□□□□ -0.44
COL11A1-210ENST00000512756 IRF9Q00978 393 aa12.28□□□□□ -0.44
COL11A1-210ENST00000512756 SLC18A2Q05940 514 aa12.28□□□□□ -0.44
COL11A1-210ENST00000512756 SUZ12Q15022 739 aaKnown RBP12.28□□□□□ -0.44
COL11A1-210ENST00000512756 PLPP4Q5VZY2 271 aa12.28□□□□□ -0.44
COL11A1-210ENST00000512756 MSANTD2Q6P1R3 559 aa12.28□□□□□ -0.44
COL11A1-210ENST00000512756 ZNF514Q96K75 400 aaPredicted RBP12.28□□□□□ -0.44
COL11A1-210ENST00000512756 FEM1AQ9BSK4 669 aa12.28□□□□□ -0.44
COL11A1-210ENST00000512756 EBPLQ9BY08 206 aa12.28□□□□□ -0.44
COL11A1-210ENST00000512756 THUMPD1Q9NXG2 353 aaKnown RBP12.28□□□□□ -0.44
COL11A1-210ENST00000512756 ZIM2Q9NZV7 527 aa12.28□□□□□ -0.44
COL11A1-210ENST00000512756 CCDC59Q9P031 241 aaKnown RBP12.28□□□□□ -0.44
COL11A1-210ENST00000512756 STOML2Q9UJZ1 356 aa12.28□□□□□ -0.44
COL11A1-210ENST00000512756 RWDD3Q9Y3V2 267 aa12.28□□□□□ -0.44
COL11A1-210ENST00000512756 CPQQ9Y646 472 aa12.28□□□□□ -0.44
COL11A1-210ENST00000512756 MTRF1O75570 445 aaKnown RBP12.27□□□□□ -0.44
COL11A1-210ENST00000512756 MTPNP58546 118 aa12.27□□□□□ -0.44
COL11A1-210ENST00000512756 USP30Q70CQ3 517 aa12.27□□□□□ -0.44
COL11A1-210ENST00000512756 USP43Q70EL4 1123 aa12.27□□□□□ -0.44
COL11A1-210ENST00000512756 CPNE8Q86YQ8 564 aa12.27□□□□□ -0.44
COL11A1-210ENST00000512756 GALNT15Q8N3T1 639 aa12.27□□□□□ -0.44
COL11A1-210ENST00000512756 NATD1Q8N6N6 113 aa12.27□□□□□ -0.44
COL11A1-210ENST00000512756 ACDQ96AP0 544 aa12.27□□□□□ -0.44
COL11A1-210ENST00000512756 PPP1R14BQ96C90 147 aa12.27□□□□□ -0.44
COL11A1-210ENST00000512756 ZBED6CLQ96FA7 236 aaPredicted RBP12.27□□□□□ -0.44
COL11A1-210ENST00000512756 ZNF570Q96NI8 536 aa12.27□□□□□ -0.44
COL11A1-210ENST00000512756 CDADC1Q9BWV3 514 aa12.27□□□□□ -0.44
COL11A1-210ENST00000512756 ATRNL1Q5VV63 1379 aa12.27□□□□□ -0.44
COL11A1-210ENST00000512756 A0A0G2JLL6 359 aaPredicted RBP12.27□□□□□ -0.45
COL11A1-210ENST00000512756 FFAR2O15552 330 aa12.27□□□□□ -0.45
COL11A1-210ENST00000512756 ATXN7L2Q5T6C5 722 aaPredicted RBP12.27□□□□□ -0.45
COL11A1-210ENST00000512756 TMEM220Q6QAJ8 160 aa12.27□□□□□ -0.45
COL11A1-210ENST00000512756 CYP2U1Q7Z449 544 aa12.27□□□□□ -0.45
COL11A1-210ENST00000512756 PRRT2Q7Z6L0 340 aaPredicted RBP12.27□□□□□ -0.45
COL11A1-210ENST00000512756 MIPEPQ99797 713 aa12.27□□□□□ -0.45
COL11A1-210ENST00000512756 SEZ6LQ9BYH1 1024 aa12.27□□□□□ -0.45
COL11A1-210ENST00000512756 SP140LQ9H930 580 aa12.27□□□□□ -0.45
COL11A1-210ENST00000512756 GIN1Q9NXP7 522 aa12.27□□□□□ -0.45
COL11A1-210ENST00000512756 TCRBV7S3A2A0A539 114 aa12.27□□□□□ -0.45
COL11A1-210ENST00000512756 OR1F1O43749 312 aa12.27□□□□□ -0.45
COL11A1-210ENST00000512756 EPHX1P07099 455 aa12.27□□□□□ -0.45
COL11A1-210ENST00000512756 AOC1P19801 751 aa12.27□□□□□ -0.45
COL11A1-210ENST00000512756 MAGP20916 626 aa12.27□□□□□ -0.45
COL11A1-210ENST00000512756 PSMD8P48556 350 aa12.27□□□□□ -0.45
COL11A1-210ENST00000512756 ZNF155Q12901 538 aaPredicted RBP12.27□□□□□ -0.45
COL11A1-210ENST00000512756 PITRM1Q5JRX3 1037 aa12.27□□□□□ -0.45
COL11A1-210ENST00000512756 OLFML2AQ68BL7 652 aa12.27□□□□□ -0.45
COL11A1-210ENST00000512756 CXorf57Q6NSI4 855 aaKnown RBP12.27□□□□□ -0.45
COL11A1-210ENST00000512756 MINDY2Q8NBR6 621 aa12.27□□□□□ -0.45
COL11A1-210ENST00000512756 C9orf43Q8TAL5 461 aaPredicted RBP12.27□□□□□ -0.45
COL11A1-210ENST00000512756 MIR1-1HGQ9H1L0 117 aa12.27□□□□□ -0.45
COL11A1-210ENST00000512756 NKIRAS2Q9NYR9 191 aa12.27□□□□□ -0.45
COL11A1-210ENST00000512756 EI24O14681 340 aa12.27□□□□□ -0.45
COL11A1-210ENST00000512756 FESP07332 822 aa12.27□□□□□ -0.45
COL11A1-210ENST00000512756 SRPRAP08240 638 aaKnown RBP12.27□□□□□ -0.45
COL11A1-210ENST00000512756 CHRNA4P43681 627 aa12.27□□□□□ -0.45
COL11A1-210ENST00000512756 CCNHP51946 323 aaPredicted RBP12.27□□□□□ -0.45
COL11A1-210ENST00000512756 PCDH1Q08174 1060 aa12.27□□□□□ -0.45
COL11A1-210ENST00000512756 CNPY1Q3B7I2 92 aa12.27□□□□□ -0.45
COL11A1-210ENST00000512756 FAM91A1Q658Y4 838 aa12.27□□□□□ -0.45
COL11A1-210ENST00000512756 TIFABQ6ZNK6 161 aa12.27□□□□□ -0.45
COL11A1-210ENST00000512756 C2orf73Q8N5S3 287 aaPredicted RBP12.27□□□□□ -0.45
COL11A1-210ENST00000512756 GTPBP3Q969Y2 492 aaKnown RBP12.27□□□□□ -0.45
COL11A1-210ENST00000512756 PPIEQ9UNP9 301 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms