RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 SLC22A11Q9NSA0 550 aa8.83□□□□□ -1
NUP54-211ENST00000512151 ABI3Q9P2A4 366 aa8.83□□□□□ -1
NUP54-211ENST00000512151 MEMO1Q9Y316 297 aa8.83□□□□□ -1
NUP54-211ENST00000512151 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.83□□□□□ -19e-6■□□□□ 11.3
NUP54-211ENST00000512151 VPS13CQ709C8 3753 aa8.83□□□□□ -1
NUP54-211ENST00000512151 HCFC1P51610 2035 aa8.82□□□□□ -1
NUP54-211ENST00000512151 A0A087X0T9 212 aa8.82□□□□□ -1
NUP54-211ENST00000512151 H3BMH7 237 aa8.82□□□□□ -1
NUP54-211ENST00000512151 EEF2KO00418 725 aaKnown RBP8.82□□□□□ -1
NUP54-211ENST00000512151 ZNHIT1O43257 154 aa8.82□□□□□ -1
NUP54-211ENST00000512151 HCRTR1O43613 425 aa8.82□□□□□ -1
NUP54-211ENST00000512151 SLC25A14O95258 325 aaPredicted RBP8.82□□□□□ -1
NUP54-211ENST00000512151 CYP1A1P04798 512 aaPredicted RBP8.82□□□□□ -1
NUP54-211ENST00000512151 FAM228BP0C875 321 aa8.82□□□□□ -1
NUP54-211ENST00000512151 ST6GAL1P15907 406 aa8.82□□□□□ -1
NUP54-211ENST00000512151 PREPP48147 710 aa8.82□□□□□ -1
NUP54-211ENST00000512151 TNFSF10P50591 281 aa8.82□□□□□ -1
NUP54-211ENST00000512151 PMP22Q01453 160 aa8.82□□□□□ -1
NUP54-211ENST00000512151 ALS2CLQ60I27 953 aa8.82□□□□□ -1
NUP54-211ENST00000512151 KIRREL2Q6UWL6 708 aa8.82□□□□□ -1
NUP54-211ENST00000512151 RAD9BQ6WBX8 426 aa8.82□□□□□ -1
NUP54-211ENST00000512151 ZNF677Q86XU0 584 aa8.82□□□□□ -1
NUP54-211ENST00000512151 MSANTD4Q8NCY6 345 aa8.82□□□□□ -1
NUP54-211ENST00000512151 THOC3Q96J01 351 aaKnown RBP8.82□□□□□ -1
NUP54-211ENST00000512151 ZNF599Q96NL3 588 aa8.82□□□□□ -1
NUP54-211ENST00000512151 LMF1Q96S06 567 aa8.82□□□□□ -1
NUP54-211ENST00000512151 NHEJ1Q9H9Q4 299 aaPredicted RBP8.82□□□□□ -1
NUP54-211ENST00000512151 TAS2R14Q9NYV8 317 aa8.82□□□□□ -1
NUP54-211ENST00000512151 GPN3Q9UHW5 284 aaPredicted RBP8.82□□□□□ -1
NUP54-211ENST00000512151 TMPRSS11EQ9UL52 423 aa8.82□□□□□ -1
NUP54-211ENST00000512151 NENFQ9UMX5 172 aa8.82□□□□□ -1
NUP54-211ENST00000512151 PSMD13Q9UNM6 376 aa8.82□□□□□ -1
NUP54-211ENST00000512151 CHKBQ9Y259 395 aa8.82□□□□□ -1
NUP54-211ENST00000512151 ZNF835Q9Y2P0 537 aa8.82□□□□□ -1
NUP54-211ENST00000512151 CFAP20Q9Y6A4 193 aaKnown RBP8.82□□□□□ -1
NUP54-211ENST00000512151 GTF3C1Q12789 2109 aa8.81□□□□□ -1
NUP54-211ENST00000512151 SOWAHDA6NJG2 315 aa8.81□□□□□ -1
NUP54-211ENST00000512151 E7EQ34 232 aa8.81□□□□□ -1
NUP54-211ENST00000512151 SLCO2B1O94956 709 aa8.81□□□□□ -1
NUP54-211ENST00000512151 F10P00742 488 aa8.81□□□□□ -1
NUP54-211ENST00000512151 CCDC172P0C7W6 258 aa8.81□□□□□ -1
NUP54-211ENST00000512151 KRT3P12035 628 aa8.81□□□□□ -1
NUP54-211ENST00000512151 PVRP15151 417 aa8.81□□□□□ -1
NUP54-211ENST00000512151 POLR2CP19387 275 aaPredicted RBP8.81□□□□□ -1
NUP54-211ENST00000512151 HSPA9P38646 679 aaKnown RBP8.81□□□□□ -1
NUP54-211ENST00000512151 CCZ1BP86790 482 aa8.81□□□□□ -1
NUP54-211ENST00000512151 CCZ1P86791 482 aaPredicted RBP8.81□□□□□ -1
NUP54-211ENST00000512151 FOLH1Q04609 750 aa8.81□□□□□ -1
NUP54-211ENST00000512151 INAQ16352 499 aa8.81□□□□□ -1
NUP54-211ENST00000512151 CLEC16AQ2KHT3 1053 aa8.81□□□□□ -1
NUP54-211ENST00000512151 ZNF569Q5MCW4 686 aa8.81□□□□□ -1
NUP54-211ENST00000512151 CDHR3Q6ZTQ4 885 aa8.81□□□□□ -1
NUP54-211ENST00000512151 RFX8Q6ZV50 586 aa8.81□□□□□ -1
NUP54-211ENST00000512151 OOSP2Q86WS3 158 aa8.81□□□□□ -1
NUP54-211ENST00000512151 LRRC8AQ8IWT6 810 aa8.81□□□□□ -1
NUP54-211ENST00000512151 GPR26Q8NDV2 337 aa8.81□□□□□ -1
NUP54-211ENST00000512151 DNAJB8Q8NHS0 232 aa8.81□□□□□ -1
NUP54-211ENST00000512151 NINJ1Q92982 152 aa8.81□□□□□ -1
NUP54-211ENST00000512151 ZNF830Q96NB3 372 aaPredicted RBP8.81□□□□□ -1
NUP54-211ENST00000512151 SLC7A5P2Q9GIP4 190 aa8.81□□□□□ -1
NUP54-211ENST00000512151 SPRTNQ9H040 489 aaPredicted RBP8.81□□□□□ -1
NUP54-211ENST00000512151 IFT80Q9P2H3 777 aaPredicted RBP8.81□□□□□ -1
NUP54-211ENST00000512151 DHCR7Q9UBM7 475 aaKnown RBP8.81□□□□□ -1
NUP54-211ENST00000512151 SERTAD3Q9UJW9 196 aa8.81□□□□□ -1
NUP54-211ENST00000512151 POMT2Q9UKY4 750 aa8.81□□□□□ -1
NUP54-211ENST00000512151 AP4E1Q9UPM8 1137 aa8.81□□□□□ -1
NUP54-211ENST00000512151 HS3ST3B1Q9Y662 390 aa8.81□□□□□ -1
NUP54-211ENST00000512151 BZW2Q9Y6E2 419 aaKnown RBP8.81□□□□□ -1
NUP54-211ENST00000512151 TLN2Q9Y4G6 2542 aa8.81□□□□□ -1
NUP54-211ENST00000512151 TRAV17A0A0B4J275 112 aa8.8□□□□□ -1
NUP54-211ENST00000512151 C1orf232A0A0U1RR37 186 aa8.8□□□□□ -1
NUP54-211ENST00000512151 TCRBV5S1A1TA0A578 114 aa8.8□□□□□ -1
NUP54-211ENST00000512151 TMCO5BA8MYB1 307 aa8.8□□□□□ -1
NUP54-211ENST00000512151 GPR89AB7ZAQ6 455 aa8.8□□□□□ -1
NUP54-211ENST00000512151 ADAM10O14672 748 aa8.8□□□□□ -1
NUP54-211ENST00000512151 MAFKO60675 156 aa8.8□□□□□ -1
NUP54-211ENST00000512151 MSL3P1P0C860 447 aa8.8□□□□□ -1
NUP54-211ENST00000512151 GPR89BP0CG08 455 aa8.8□□□□□ -1
NUP54-211ENST00000512151 ITGAXP20702 1163 aa8.8□□□□□ -1
NUP54-211ENST00000512151 CDH3P22223 829 aa8.8□□□□□ -1
NUP54-211ENST00000512151 MMP11P24347 488 aa8.8□□□□□ -1
NUP54-211ENST00000512151 HTR7P34969 479 aa8.8□□□□□ -1
NUP54-211ENST00000512151 SOX11P35716 441 aa8.8□□□□□ -1
NUP54-211ENST00000512151 MEOX1P50221 254 aa8.8□□□□□ -1
NUP54-211ENST00000512151 ZNF143P52747 638 aaPredicted RBP8.8□□□□□ -1
NUP54-211ENST00000512151 EPHB1P54762 984 aa8.8□□□□□ -1
NUP54-211ENST00000512151 CASP6P55212 293 aa8.8□□□□□ -1
NUP54-211ENST00000512151 RPL7AP62424 266 aaKnown RBP8.8□□□□□ -1
NUP54-211ENST00000512151 ARG2P78540 354 aa8.8□□□□□ -1
NUP54-211ENST00000512151 DCDP81605 110 aaKnown RBP8.8□□□□□ -1
NUP54-211ENST00000512151 OGDHQ02218 1023 aa8.8□□□□□ -1
NUP54-211ENST00000512151 RBPJQ06330 500 aa8.8□□□□□ -1
NUP54-211ENST00000512151 ACAD10Q6JQN1 1059 aa8.8□□□□□ -1
NUP54-211ENST00000512151 CLEC9AQ6UXN8 241 aa8.8□□□□□ -1
NUP54-211ENST00000512151 Q6ZPB1 254 aaPredicted RBP8.8□□□□□ -1
NUP54-211ENST00000512151 FAM20CQ8IXL6 584 aa8.8□□□□□ -1
NUP54-211ENST00000512151 RAVER1Q8IY67 606 aaKnown RBP8.8□□□□□ -1
NUP54-211ENST00000512151 CARFQ8N187 725 aa8.8□□□□□ -1
NUP54-211ENST00000512151 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.8□□□□□ -1
NUP54-211ENST00000512151 LRRN4CLQ8ND94 238 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms