RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 CALUO43852 315 aaPredicted RBP4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 AGTP01019 485 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 APOA1P02647 267 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 HMGN1P05114 100 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 OR52Z1P0C646 297 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 SMIM10L2AP0DMW4 78 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 SMIM10L2BP0DMW5 78 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 NPPBP16860 134 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 HLA-FP30511 346 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 CDC34P49427 236 aaPredicted RBP4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 CCL23P55773 120 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 ATP5IP56385 69 aaPredicted RBP4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 CLDN8P56748 225 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 NKX6-1P78426 367 aaPredicted RBP4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 IRF9Q00978 393 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 GALK2Q01415 458 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 KRT76Q01546 638 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 SOX4Q06945 474 aaPredicted RBP4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 RESTQ13127 1097 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 PIGHQ14442 188 aaPredicted RBP4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 STILQ15468 1287 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 PTGISQ16647 500 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 MAPK6Q16659 721 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 DNAL1Q4LDG9 190 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 IFI44LQ53G44 452 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 PITRM1Q5JRX3 1037 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 AARS2Q5JTZ9 985 aaKnown RBP4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 C6orf163Q5TEZ5 329 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 LRRC38Q5VT99 294 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 GDF6Q6KF10 455 aaPredicted RBP4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 NCEH1Q6PIU2 408 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 ZNF677Q86XU0 584 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 ANKLE1Q8NAG6 615 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 PAQR8Q8TEZ7 354 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 LPPQ93052 612 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 RRNAD1Q96FB5 475 aaKnown RBP4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 DYDC2Q96IM9 177 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 ZNF479Q96JC4 524 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 PCYT2Q99447 389 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 PAFAH2Q99487 392 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 BPIFA3Q9BQP9 254 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 SRSF8Q9BRL6 282 aaKnown RBP4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 CALN1Q9BXU9 219 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 FAM49AQ9H0Q0 323 aaPredicted RBP4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 SMG9Q9H0W8 520 aaKnown RBP4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 SLC6A15Q9H2J7 730 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 RIMS4Q9H426 269 aaPredicted RBP4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 POLD4Q9HCU8 107 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 KCNMB3Q9NPA1 279 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 G6PC2Q9NQR9 355 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 CNGB3Q9NQW8 809 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 ZNF302Q9NR11 478 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 ERAP1Q9NZ08 941 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 VSX1Q9NZR4 365 aaPredicted RBP4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 SLCO3A1Q9UIG8 710 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 CBLCQ9ULV8 474 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 SH3GLB1Q9Y371 365 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 ZDHHC9Q9Y397 364 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 Q9Y3F1 56 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 STARD13Q9Y3M8 1113 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 MAD1L1Q9Y6D9 718 aa4.95□□□□□ -1.62
TRAPPC11-208ENST00000511955 UMODL1Q5DID0 1318 aa4.94□□□□□ -1.62
TRAPPC11-208ENST00000511955 FRMPD3Q5JV73 1810 aa4.94□□□□□ -1.62
TRAPPC11-208ENST00000511955 CCDC187A0A096LP49 1063 aa4.94□□□□□ -1.62
TRAPPC11-208ENST00000511955 FAM230AA0A1W2PPH8 454 aa4.94□□□□□ -1.62
TRAPPC11-208ENST00000511955 KANSL1LA0AUZ9 987 aa4.94□□□□□ -1.62
TRAPPC11-208ENST00000511955 HELTA6NFD8 242 aa4.94□□□□□ -1.62
TRAPPC11-208ENST00000511955 PIK3R2O00459 728 aa4.94□□□□□ -1.62
TRAPPC11-208ENST00000511955 ST8SIA3O43173 380 aa4.94□□□□□ -1.62
TRAPPC11-208ENST00000511955 TRIM3O75382 744 aaPredicted RBP4.94□□□□□ -1.62
TRAPPC11-208ENST00000511955 INSRRP14616 1297 aa4.94□□□□□ -1.62
TRAPPC11-208ENST00000511955 TNNI3P19429 210 aa4.94□□□□□ -1.62
TRAPPC11-208ENST00000511955 NCF2P19878 526 aaPredicted RBP4.94□□□□□ -1.62
TRAPPC11-208ENST00000511955 DRD5P21918 477 aa4.94□□□□□ -1.62
TRAPPC11-208ENST00000511955 CYP2C18P33260 490 aa4.94□□□□□ -1.62
TRAPPC11-208ENST00000511955 RYKP34925 604 aa4.94□□□□□ -1.62
TRAPPC11-208ENST00000511955 CARSP49589 748 aaKnown RBP4.94□□□□□ -1.62
TRAPPC11-208ENST00000511955 GPR15P49685 360 aa4.94□□□□□ -1.62
TRAPPC11-208ENST00000511955 MFAP4P55083 255 aa4.94□□□□□ -1.62
TRAPPC11-208ENST00000511955 UCP2P55851 309 aa4.94□□□□□ -1.62
TRAPPC11-208ENST00000511955 NLRP11P59045 1033 aaKnown RBP4.94□□□□□ -1.62
TRAPPC11-208ENST00000511955 PDE1BQ01064 536 aa4.94□□□□□ -1.62
TRAPPC11-208ENST00000511955 MERTKQ12866 999 aa4.94□□□□□ -1.62
TRAPPC11-208ENST00000511955 IL18Q14116 193 aa4.94□□□□□ -1.62
TRAPPC11-208ENST00000511955 CAPRIN1Q14444 709 aaKnown RBP4.94□□□□□ -1.62
TRAPPC11-208ENST00000511955 CLCA4Q14CN2 919 aa4.94□□□□□ -1.62
TRAPPC11-208ENST00000511955 CDONQ4KMG0 1287 aa4.94□□□□□ -1.62
TRAPPC11-208ENST00000511955 ZNF484Q5JVG2 852 aa4.94□□□□□ -1.62
TRAPPC11-208ENST00000511955 PHYHD1Q5SRE7 291 aa4.94□□□□□ -1.62
TRAPPC11-208ENST00000511955 TTC27Q6P3X3 843 aa4.94□□□□□ -1.62
TRAPPC11-208ENST00000511955 CLEC9AQ6UXN8 241 aa4.94□□□□□ -1.62
TRAPPC11-208ENST00000511955 ABHD15Q6UXT9 468 aa4.94□□□□□ -1.62
TRAPPC11-208ENST00000511955 NDUFAF7Q7L592 441 aa4.94□□□□□ -1.62
TRAPPC11-208ENST00000511955 NIPA1Q7RTP0 329 aa4.94□□□□□ -1.62
TRAPPC11-208ENST00000511955 TMPRSS9Q7Z410 1059 aa4.94□□□□□ -1.62
TRAPPC11-208ENST00000511955 PLCZ1Q86YW0 608 aa4.94□□□□□ -1.62
TRAPPC11-208ENST00000511955 CLVS1Q8IUQ0 354 aaPredicted RBP4.94□□□□□ -1.62
TRAPPC11-208ENST00000511955 ARID3BQ8IVW6 561 aaPredicted RBP4.94□□□□□ -1.62
TRAPPC11-208ENST00000511955 LRRC8AQ8IWT6 810 aa4.94□□□□□ -1.62
TRAPPC11-208ENST00000511955 PPIL6Q8IXY8 311 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms