RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 SCRT2Q9NQ03 307 aa3.04□□□□□ -1.92
CHD1-207ENST00000511628 ZFP57Q9NU63 452 aa3.04□□□□□ -1.92
CHD1-207ENST00000511628 TMEM30AQ9NV96 361 aa3.04□□□□□ -1.92
CHD1-207ENST00000511628 PRMT7Q9NVM4 692 aaPredicted RBP3.04□□□□□ -1.92
CHD1-207ENST00000511628 OSER1Q9NX31 292 aa3.04□□□□□ -1.92
CHD1-207ENST00000511628 RCC2Q9P258 522 aaKnown RBP3.04□□□□□ -1.92
CHD1-207ENST00000511628 RHCGQ9UBD6 479 aa3.04□□□□□ -1.92
CHD1-207ENST00000511628 OSGIN1Q9UJX0 560 aa3.04□□□□□ -1.92
CHD1-207ENST00000511628 PRSS51A0A1B0GVH4 220 aa3.03□□□□□ -1.92
CHD1-207ENST00000511628 H0YIN7 160 aa3.03□□□□□ -1.92
CHD1-207ENST00000511628 XRCC3O43542 346 aa3.03□□□□□ -1.92
CHD1-207ENST00000511628 SERPINB2P05120 415 aa3.03□□□□□ -1.92
CHD1-207ENST00000511628 VPREB1P12018 145 aa3.03□□□□□ -1.92
CHD1-207ENST00000511628 EEF1DP29692 281 aaKnown RBP3.03□□□□□ -1.92
CHD1-207ENST00000511628 CCR10P46092 362 aa3.03□□□□□ -1.92
CHD1-207ENST00000511628 SNRPEP62304 92 aaKnown RBP3.03□□□□□ -1.92
CHD1-207ENST00000511628 PITX1P78337 314 aaPredicted RBP3.03□□□□□ -1.92
CHD1-207ENST00000511628 POU5F1Q01860 360 aaKnown RBP3.03□□□□□ -1.92
CHD1-207ENST00000511628 PPARDQ03181 441 aa3.03□□□□□ -1.92
CHD1-207ENST00000511628 PSMD6Q15008 389 aa3.03□□□□□ -1.92
CHD1-207ENST00000511628 STXBP5Q5T5C0 1151 aa3.03□□□□□ -1.92
CHD1-207ENST00000511628 RNASEH2BQ5TBB1 312 aaKnown RBP3.03□□□□□ -1.92
CHD1-207ENST00000511628 ZDHHC20Q5W0Z9 365 aa3.03□□□□□ -1.92
CHD1-207ENST00000511628 PLA2G4FQ68DD2 849 aa3.03□□□□□ -1.92
CHD1-207ENST00000511628 TRAT1Q6PIZ9 186 aa3.03□□□□□ -1.92
CHD1-207ENST00000511628 DNAJB7Q7Z6W7 309 aaPredicted RBP3.03□□□□□ -1.92
CHD1-207ENST00000511628 DSG4Q86SJ6 1040 aa3.03□□□□□ -1.92
CHD1-207ENST00000511628 IQCHQ86VS3 1027 aa3.03□□□□□ -1.92
CHD1-207ENST00000511628 FAM9BQ8IZU0 186 aa3.03□□□□□ -1.92
CHD1-207ENST00000511628 AFAP1Q8N556 730 aa3.03□□□□□ -1.92
CHD1-207ENST00000511628 PI4KAP1Q8N8J0 262 aa3.03□□□□□ -1.92
CHD1-207ENST00000511628 TMEM255BQ8WV15 326 aa3.03□□□□□ -1.92
CHD1-207ENST00000511628 OR6C1Q96RD1 312 aa3.03□□□□□ -1.92
CHD1-207ENST00000511628 LRRC1Q9BTT6 524 aa3.03□□□□□ -1.92
CHD1-207ENST00000511628 DPAGT1Q9H3H5 408 aa3.03□□□□□ -1.92
CHD1-207ENST00000511628 ERVMER34-1Q9H9K5 563 aa3.03□□□□□ -1.92
CHD1-207ENST00000511628 EQTNQ9NQ60 294 aa3.03□□□□□ -1.92
CHD1-207ENST00000511628 CHCHD3Q9NX63 227 aaKnown RBP3.03□□□□□ -1.92
CHD1-207ENST00000511628 EDDM13A0A1B0GTR0 161 aa3.02□□□□□ -1.93
CHD1-207ENST00000511628 OR5K3A6NET4 321 aa3.02□□□□□ -1.93
CHD1-207ENST00000511628 TMEM221A6NGB7 291 aa3.02□□□□□ -1.93
CHD1-207ENST00000511628 LILRA5A6NI73 299 aa3.02□□□□□ -1.93
CHD1-207ENST00000511628 TRIM77I1YAP6 450 aa3.02□□□□□ -1.93
CHD1-207ENST00000511628 SSX4O60224 188 aa3.02□□□□□ -1.93
CHD1-207ENST00000511628 OR10H2O60403 315 aa3.02□□□□□ -1.93
CHD1-207ENST00000511628 PRAMEF11O60813 436 aa3.02□□□□□ -1.93
CHD1-207ENST00000511628 WDR1O75083 606 aa3.02□□□□□ -1.93
CHD1-207ENST00000511628 FYNP06241 537 aa3.02□□□□□ -1.93
CHD1-207ENST00000511628 GM2AP17900 193 aa3.02□□□□□ -1.93
CHD1-207ENST00000511628 POLR2CP19387 275 aaPredicted RBP3.02□□□□□ -1.93
CHD1-207ENST00000511628 PTAFRP25105 342 aa3.02□□□□□ -1.93
CHD1-207ENST00000511628 AZGP1P25311 298 aaKnown RBP3.02□□□□□ -1.93
CHD1-207ENST00000511628 CDKN1AP38936 164 aa3.02□□□□□ -1.93
CHD1-207ENST00000511628 HOXA1P49639 335 aaPredicted RBP3.02□□□□□ -1.93
CHD1-207ENST00000511628 CTSCP53634 463 aa3.02□□□□□ -1.93
CHD1-207ENST00000511628 PNRC1Q12796 327 aaPredicted RBP3.02□□□□□ -1.93
CHD1-207ENST00000511628 PRKAA1Q13131 559 aa3.02□□□□□ -1.93
CHD1-207ENST00000511628 GTF2H2Q13888 395 aa3.02□□□□□ -1.93
CHD1-207ENST00000511628 RBM39Q14498 530 aaKnown RBP3.02□□□□□ -1.93
CHD1-207ENST00000511628 COG2Q14746 738 aa3.02□□□□□ -1.93
CHD1-207ENST00000511628 VWC2Q2TAL6 325 aa3.02□□□□□ -1.93
CHD1-207ENST00000511628 KRT80Q6KB66 452 aa3.02□□□□□ -1.93
CHD1-207ENST00000511628 GTF2H2CQ6P1K8 395 aa3.02□□□□□ -1.93
CHD1-207ENST00000511628 ASB18Q6ZVZ8 466 aa3.02□□□□□ -1.93
CHD1-207ENST00000511628 GALNTL5Q7Z4T8 443 aa3.02□□□□□ -1.93
CHD1-207ENST00000511628 CENPVQ7Z7K6 275 aaPredicted RBP3.02□□□□□ -1.93
CHD1-207ENST00000511628 ANKRD23Q86SG2 305 aa3.02□□□□□ -1.93
CHD1-207ENST00000511628 TMEM173Q86WV6 379 aaPredicted RBP3.02□□□□□ -1.93
CHD1-207ENST00000511628 CEP57L1Q8IYX8 460 aa3.02□□□□□ -1.93
CHD1-207ENST00000511628 C1orf52Q8N6N3 182 aaKnown RBP3.02□□□□□ -1.93
CHD1-207ENST00000511628 SEMA4DQ92854 862 aa3.02□□□□□ -1.93
CHD1-207ENST00000511628 SPACA9Q96E40 222 aaPredicted RBP3.02□□□□□ -1.93
CHD1-207ENST00000511628 WBP1Q96G27 269 aa3.02□□□□□ -1.93
CHD1-207ENST00000511628 FAM81BQ96LP2 452 aa3.02□□□□□ -1.93
CHD1-207ENST00000511628 MS4A10Q96PG2 267 aa3.02□□□□□ -1.93
CHD1-207ENST00000511628 NEK1Q96PY6 1258 aa3.02□□□□□ -1.93
CHD1-207ENST00000511628 POLR3CQ9BUI4 534 aaPredicted RBP3.02□□□□□ -1.93
CHD1-207ENST00000511628 LRMDAQ9H2I8 198 aa3.02□□□□□ -1.93
CHD1-207ENST00000511628 ANKZF1Q9H8Y5 726 aa3.02□□□□□ -1.93
CHD1-207ENST00000511628 NPAP1Q9NZP6 1156 aa3.02□□□□□ -1.93
CHD1-207ENST00000511628 TEX13DA0A0J9YY54 714 aaPredicted RBP3.01□□□□□ -1.93
CHD1-207ENST00000511628 ZCWPW2A0A1B0GU75 182 aa3.01□□□□□ -1.93
CHD1-207ENST00000511628 ANKUB1A6NFN9 424 aa3.01□□□□□ -1.93
CHD1-207ENST00000511628 EIF3DO15371 548 aaKnown RBP eCLIP3.01□□□□□ -1.93
CHD1-207ENST00000511628 QDPRP09417 244 aa3.01□□□□□ -1.93
CHD1-207ENST00000511628 OR52Z1P0C646 297 aa3.01□□□□□ -1.93
CHD1-207ENST00000511628 PFKFB1P16118 471 aa3.01□□□□□ -1.93
CHD1-207ENST00000511628 IFNAR1P17181 557 aa3.01□□□□□ -1.93
CHD1-207ENST00000511628 GJA1P17302 382 aa3.01□□□□□ -1.93
CHD1-207ENST00000511628 MARK3P27448 753 aa3.01□□□□□ -1.93
CHD1-207ENST00000511628 MATR3P43243 847 aaKnown RBP eCLIP3.01□□□□□ -1.93
CHD1-207ENST00000511628 NPY4RP50391 375 aa3.01□□□□□ -1.93
CHD1-207ENST00000511628 ATP12AP54707 1039 aa3.01□□□□□ -1.93
CHD1-207ENST00000511628 ERVK11-1P61568 191 aa3.01□□□□□ -1.93
CHD1-207ENST00000511628 CDK3Q00526 305 aa3.01□□□□□ -1.93
CHD1-207ENST00000511628 GAGE2BQ13066 116 aa3.01□□□□□ -1.93
CHD1-207ENST00000511628 ZNF234Q14588 700 aa3.01□□□□□ -1.93
CHD1-207ENST00000511628 CCDC6Q16204 474 aa3.01□□□□□ -1.93
CHD1-207ENST00000511628 HYAL4Q2M3T9 481 aa3.01□□□□□ -1.93
CHD1-207ENST00000511628 GAGE2EQ4V326 116 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms