RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 DRG1Q9Y295 367 aaKnown RBP22.34■■□□□ 1.17
SNF8-209ENST00000510558 ZKSCAN5Q9Y2L8 839 aa22.34■■□□□ 1.17
SNF8-209ENST00000510558 TCAF1Q9Y4C2 921 aa22.34■■□□□ 1.17
SNF8-209ENST00000510558 HELZ2Q9BYK8 2649 aaKnown RBP22.33■■□□□ 1.17
SNF8-209ENST00000510558 LIN7AO14910 233 aaPredicted RBP22.33■■□□□ 1.17
SNF8-209ENST00000510558 SFTPCP11686 197 aa22.33■■□□□ 1.17
SNF8-209ENST00000510558 F8A1P23610 371 aa22.33■■□□□ 1.17
SNF8-209ENST00000510558 DLSTP36957 453 aa22.33■■□□□ 1.17
SNF8-209ENST00000510558 NFATC3Q12968 1075 aa22.33■■□□□ 1.17
SNF8-209ENST00000510558 LYPLAL1Q5VWZ2 237 aa22.33■■□□□ 1.17
SNF8-209ENST00000510558 PWWP2BQ6NUJ5 590 aa22.33■■□□□ 1.17
SNF8-209ENST00000510558 FBXO38Q6PIJ6 1188 aa22.33■■□□□ 1.17
SNF8-209ENST00000510558 NLRP9Q7RTR0 991 aa22.33■■□□□ 1.17
SNF8-209ENST00000510558 BPHLQ86WA6 291 aaPredicted RBP22.33■■□□□ 1.17
SNF8-209ENST00000510558 OR52E1Q8NGJ3 308 aa22.33■■□□□ 1.17
SNF8-209ENST00000510558 ELMO1Q92556 727 aa22.33■■□□□ 1.17
SNF8-209ENST00000510558 FCRL4Q96PJ5 515 aa22.33■■□□□ 1.17
SNF8-209ENST00000510558 HGH1Q9BTY7 390 aa22.33■■□□□ 1.17
SNF8-209ENST00000510558 EIF2B3Q9NR50 452 aaKnown RBP22.33■■□□□ 1.17
SNF8-209ENST00000510558 MRPS18BQ9Y676 258 aaKnown RBP22.33■■□□□ 1.17
SNF8-209ENST00000510558 GSAPA4D1B5 854 aa22.32■■□□□ 1.16
SNF8-209ENST00000510558 MATN2O00339 956 aa22.32■■□□□ 1.16
SNF8-209ENST00000510558 OR56A5P0C7T3 313 aa22.32■■□□□ 1.16
SNF8-209ENST00000510558 ITGB6P18564 788 aa22.32■■□□□ 1.16
SNF8-209ENST00000510558 CDH3P22223 829 aa22.32■■□□□ 1.16
SNF8-209ENST00000510558 OAS2P29728 719 aaKnown RBP22.32■■□□□ 1.16
SNF8-209ENST00000510558 PRAMEP78395 509 aa22.32■■□□□ 1.16
SNF8-209ENST00000510558 MC1RQ01726 317 aa22.32■■□□□ 1.16
SNF8-209ENST00000510558 BOP1Q14137 746 aaKnown RBP22.32■■□□□ 1.16
SNF8-209ENST00000510558 ZNF534Q76KX8 674 aa22.32■■□□□ 1.16
SNF8-209ENST00000510558 PPHLN1Q8NEY8 458 aaKnown RBP22.32■■□□□ 1.16
SNF8-209ENST00000510558 OR6P1Q8NGX9 317 aa22.32■■□□□ 1.16
SNF8-209ENST00000510558 OR4L1Q8NH43 312 aa22.32■■□□□ 1.16
SNF8-209ENST00000510558 TTC1Q99614 292 aa22.32■■□□□ 1.16
SNF8-209ENST00000510558 NRTNQ99748 197 aa22.32■■□□□ 1.16
SNF8-209ENST00000510558 TFB2MQ9H5Q4 396 aaKnown RBP22.32■■□□□ 1.16
SNF8-209ENST00000510558 STARD5Q9NSY2 213 aa22.32■■□□□ 1.16
SNF8-209ENST00000510558 GEMIN8Q9NWZ8 242 aaKnown RBP22.32■■□□□ 1.16
SNF8-209ENST00000510558 SOHLH2Q9NX45 425 aa22.32■■□□□ 1.16
SNF8-209ENST00000510558 BTN3A3O00478 584 aa22.31■■□□□ 1.16
SNF8-209ENST00000510558 BTN3A1O00481 513 aa22.31■■□□□ 1.16
SNF8-209ENST00000510558 TERTO14746 1132 aaKnown RBP22.31■■□□□ 1.16
SNF8-209ENST00000510558 NRDCO43847 1150 aa22.31■■□□□ 1.16
SNF8-209ENST00000510558 CEP104O60308 925 aa22.31■■□□□ 1.16
SNF8-209ENST00000510558 OR1I1O60431 355 aa22.31■■□□□ 1.16
SNF8-209ENST00000510558 MT-ND3P03897 115 aa22.31■■□□□ 1.16
SNF8-209ENST00000510558 CCNYL3P0C7X3 344 aa22.31■■□□□ 1.16
SNF8-209ENST00000510558 TCN2P20062 427 aa22.31■■□□□ 1.16
SNF8-209ENST00000510558 TUBB4BP68371 445 aa22.31■■□□□ 1.16
SNF8-209ENST00000510558 BASP1P80723 227 aaKnown RBP22.31■■□□□ 1.16
SNF8-209ENST00000510558 PRKG2Q13237 762 aa22.31■■□□□ 1.16
SNF8-209ENST00000510558 TUBB2AQ13885 445 aa22.31■■□□□ 1.16
SNF8-209ENST00000510558 BRD3Q15059 726 aa22.31■■□□□ 1.16
SNF8-209ENST00000510558 GPR19Q15760 415 aa22.31■■□□□ 1.16
SNF8-209ENST00000510558 TMTC4Q5T4D3 741 aa22.31■■□□□ 1.16
SNF8-209ENST00000510558 C4orf22Q6V702 233 aa22.31■■□□□ 1.16
SNF8-209ENST00000510558 GSTA5Q7RTV2 222 aa22.31■■□□□ 1.16
SNF8-209ENST00000510558 PEX13Q92968 403 aa22.31■■□□□ 1.16
SNF8-209ENST00000510558 TUBB2BQ9BVA1 445 aa22.31■■□□□ 1.16
SNF8-209ENST00000510558 ADNPQ9H2P0 1102 aa22.31■■□□□ 1.16
SNF8-209ENST00000510558 C1GALT1Q9NS00 363 aa22.31■■□□□ 1.16
SNF8-209ENST00000510558 PADI1Q9ULC6 663 aa22.31■■□□□ 1.16
SNF8-209ENST00000510558 BTRCQ9Y297 605 aa22.31■■□□□ 1.16
SNF8-209ENST00000510558 PPP2R2CQ9Y2T4 447 aa22.31■■□□□ 1.16
SNF8-209ENST00000510558 SLC9B1P1A6NJY1 282 aa22.3■■□□□ 1.16
SNF8-209ENST00000510558 CXCR5P32302 372 aa22.3■■□□□ 1.16
SNF8-209ENST00000510558 CCR10P46092 362 aa22.3■■□□□ 1.16
SNF8-209ENST00000510558 KCNJ1P48048 391 aa22.3■■□□□ 1.16
SNF8-209ENST00000510558 POLE2P56282 527 aa22.3■■□□□ 1.16
SNF8-209ENST00000510558 SESN2P58004 480 aaPredicted RBP22.3■■□□□ 1.16
SNF8-209ENST00000510558 SEMA3AQ14563 771 aa22.3■■□□□ 1.16
SNF8-209ENST00000510558 SYTL3Q4VX76 610 aa22.3■■□□□ 1.16
SNF8-209ENST00000510558 CRTC2Q53ET0 693 aaPredicted RBP22.3■■□□□ 1.16
SNF8-209ENST00000510558 FASTKD1Q53R41 847 aaKnown RBP22.3■■□□□ 1.16
SNF8-209ENST00000510558 C16orf46Q6P387 395 aa22.3■■□□□ 1.16
SNF8-209ENST00000510558 NAPRTQ6XQN6 538 aa22.3■■□□□ 1.16
SNF8-209ENST00000510558 AMIGO1Q86WK6 493 aa22.3■■□□□ 1.16
SNF8-209ENST00000510558 ZNF501Q96CX3 271 aaPredicted RBP22.3■■□□□ 1.16
SNF8-209ENST00000510558 SGSM3Q96HU1 749 aa22.3■■□□□ 1.16
SNF8-209ENST00000510558 XKR8Q9H6D3 395 aa22.3■■□□□ 1.16
SNF8-209ENST00000510558 LHX9Q9NQ69 397 aa22.3■■□□□ 1.16
SNF8-209ENST00000510558 ASF1AQ9Y294 204 aa22.3■■□□□ 1.16
SNF8-209ENST00000510558 TLN1Q9Y490 2541 aaKnown RBP22.3■■□□□ 1.16
SNF8-209ENST00000510558 SPTBP11277 2137 aa22.3■■□□□ 1.16
SNF8-209ENST00000510558 SLC5A10A0PJK1 596 aa22.29■■□□□ 1.16
SNF8-209ENST00000510558 F8W8V4 182 aa22.29■■□□□ 1.16
SNF8-209ENST00000510558 KATNA1O75449 491 aa22.29■■□□□ 1.16
SNF8-209ENST00000510558 NTRK1P04629 796 aa22.29■■□□□ 1.16
SNF8-209ENST00000510558 ACADLP28330 430 aa22.29■■□□□ 1.16
SNF8-209ENST00000510558 PRDX3P30048 256 aaKnown RBP22.29■■□□□ 1.16
SNF8-209ENST00000510558 PCID2Q5JVF3 399 aa22.29■■□□□ 1.16
SNF8-209ENST00000510558 ATP1A1-AS1Q5TC04 95 aa22.29■■□□□ 1.16
SNF8-209ENST00000510558 OR5AR1Q8NGP9 310 aa22.29■■□□□ 1.16
SNF8-209ENST00000510558 OR8K5Q8NH50 307 aa22.29■■□□□ 1.16
SNF8-209ENST00000510558 CT55Q8WUE5 264 aa22.29■■□□□ 1.16
SNF8-209ENST00000510558 FAM117AQ9C073 453 aa22.29■■□□□ 1.16
SNF8-209ENST00000510558 CHRAC1Q9NRG0 131 aa22.29■■□□□ 1.16
SNF8-209ENST00000510558 KCND3Q9UK17 655 aa22.29■■□□□ 1.16
SNF8-209ENST00000510558 PCDHB3Q9Y5E6 796 aa22.29■■□□□ 1.16
SNF8-209ENST00000510558 C2orf74A8MZ97 194 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms