RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 PRDX3P30048 256 aaKnown RBP10.37□□□□□ -0.75
SNF8-207ENST00000509995 BPIFB4P59827 614 aa10.37□□□□□ -0.75
SNF8-207ENST00000509995 XRCC4Q13426 336 aa10.37□□□□□ -0.75
SNF8-207ENST00000509995 NKG7Q16617 165 aa10.37□□□□□ -0.75
SNF8-207ENST00000509995 TAF3Q5VWG9 929 aa10.37□□□□□ -0.75
SNF8-207ENST00000509995 NAA35Q5VZE5 725 aa10.37□□□□□ -0.75
SNF8-207ENST00000509995 ALS2CLQ60I27 953 aa10.37□□□□□ -0.75
SNF8-207ENST00000509995 PDPK2PQ6A1A2 396 aa10.37□□□□□ -0.75
SNF8-207ENST00000509995 HIBCHQ6NVY1 386 aaPredicted RBP10.37□□□□□ -0.75
SNF8-207ENST00000509995 CEP128Q6ZU80 1094 aa10.37□□□□□ -0.75
SNF8-207ENST00000509995 CHSY3Q70JA7 882 aa10.37□□□□□ -0.75
SNF8-207ENST00000509995 CDC20BQ86Y33 519 aa10.37□□□□□ -0.75
SNF8-207ENST00000509995 CHERPQ8IWX8 916 aaKnown RBP10.37□□□□□ -0.75
SNF8-207ENST00000509995 ZZZ3Q8IYH5 903 aa10.37□□□□□ -0.75
SNF8-207ENST00000509995 FAM71AQ8IYT1 594 aa10.37□□□□□ -0.75
SNF8-207ENST00000509995 CLYBLQ8N0X4 340 aa10.37□□□□□ -0.75
SNF8-207ENST00000509995 CIARTQ8N365 385 aaPredicted RBP10.37□□□□□ -0.75
SNF8-207ENST00000509995 BBS5Q8N3I7 341 aa10.37□□□□□ -0.75
SNF8-207ENST00000509995 MARVELD2Q8N4S9 558 aa10.37□□□□□ -0.75
SNF8-207ENST00000509995 CPSF7Q8N684 471 aaKnown RBP10.37□□□□□ -0.75
SNF8-207ENST00000509995 SIRT6Q8N6T7 355 aa10.37□□□□□ -0.75
SNF8-207ENST00000509995 C3orf20Q8ND61 904 aa10.37□□□□□ -0.75
SNF8-207ENST00000509995 GOT1L1Q8NHS2 421 aaPredicted RBP10.37□□□□□ -0.75
SNF8-207ENST00000509995 TMEM158Q8WZ71 300 aa10.37□□□□□ -0.75
SNF8-207ENST00000509995 N4BP2L2Q92802 583 aaPredicted RBP10.37□□□□□ -0.75
SNF8-207ENST00000509995 HDAC10Q969S8 669 aa10.37□□□□□ -0.75
SNF8-207ENST00000509995 MESP1Q9BRJ9 268 aa10.37□□□□□ -0.75
SNF8-207ENST00000509995 SPRTNQ9H040 489 aaPredicted RBP10.37□□□□□ -0.75
SNF8-207ENST00000509995 KLHL25Q9H0H3 589 aa10.37□□□□□ -0.75
SNF8-207ENST00000509995 RMND1Q9NWS8 449 aa10.37□□□□□ -0.75
SNF8-207ENST00000509995 NOCTQ9UK39 431 aaKnown RBP10.37□□□□□ -0.75
SNF8-207ENST00000509995 RNF6Q9Y252 685 aa10.37□□□□□ -0.75
SNF8-207ENST00000509995 SNRNP200O75643 2136 aaKnown RBP10.37□□□□□ -0.75
SNF8-207ENST00000509995 FAM237AA0A1B0GTK4 181 aa10.36□□□□□ -0.75
SNF8-207ENST00000509995 OR5H15A6NDH6 313 aa10.36□□□□□ -0.75
SNF8-207ENST00000509995 IDSB3KWA1 339 aa10.36□□□□□ -0.75
SNF8-207ENST00000509995 NPIPA5E9PKD4 350 aa10.36□□□□□ -0.75
SNF8-207ENST00000509995 PSMA7O14818 248 aa10.36□□□□□ -0.75
SNF8-207ENST00000509995 CCP110O43303 1012 aa10.36□□□□□ -0.75
SNF8-207ENST00000509995 KCNJ13O60928 360 aa10.36□□□□□ -0.75
SNF8-207ENST00000509995 MYBL2P10244 700 aa10.36□□□□□ -0.75
SNF8-207ENST00000509995 ITGAXP20702 1163 aa10.36□□□□□ -0.75
SNF8-207ENST00000509995 GPD1P21695 349 aa10.36□□□□□ -0.75
SNF8-207ENST00000509995 TMPRSS15P98073 1019 aa10.36□□□□□ -0.75
SNF8-207ENST00000509995 HSF1Q00613 529 aa10.36□□□□□ -0.75
SNF8-207ENST00000509995 ALDH6A1Q02252 535 aaKnown RBP10.36□□□□□ -0.75
SNF8-207ENST00000509995 OLIG2Q13516 323 aa10.36□□□□□ -0.75
SNF8-207ENST00000509995 KEAP1Q14145 624 aa10.36□□□□□ -0.75
SNF8-207ENST00000509995 DEFB110Q30KQ9 67 aa10.36□□□□□ -0.75
SNF8-207ENST00000509995 ANKRD20A8PQ5CZ79 823 aa10.36□□□□□ -0.75
SNF8-207ENST00000509995 FOXD4L5Q5VV16 416 aaPredicted RBP10.36□□□□□ -0.75
SNF8-207ENST00000509995 SHEQ5VZ18 495 aa10.36□□□□□ -0.75
SNF8-207ENST00000509995 FAM83HQ6ZRV2 1179 aaPredicted RBP10.36□□□□□ -0.75
SNF8-207ENST00000509995 SHISA6Q6ZSJ9 500 aa10.36□□□□□ -0.75
SNF8-207ENST00000509995 GHDCQ8N2G8 530 aa10.36□□□□□ -0.75
SNF8-207ENST00000509995 ZNF655Q8N720 491 aaPredicted RBP10.36□□□□□ -0.75
SNF8-207ENST00000509995 CCHCR1Q8TD31 782 aa10.36□□□□□ -0.75
SNF8-207ENST00000509995 FOXD4L4Q8WXT5 416 aaPredicted RBP10.36□□□□□ -0.75
SNF8-207ENST00000509995 PWWP2AQ96N64 755 aa10.36□□□□□ -0.75
SNF8-207ENST00000509995 TRIM51Q9BSJ1 452 aa10.36□□□□□ -0.75
SNF8-207ENST00000509995 NUP85Q9BW27 656 aa10.36□□□□□ -0.75
SNF8-207ENST00000509995 SOX17Q9H6I2 414 aaPredicted RBP10.36□□□□□ -0.75
SNF8-207ENST00000509995 NEUROD4Q9HD90 331 aa10.36□□□□□ -0.75
SNF8-207ENST00000509995 FANCLQ9NW38 375 aa10.36□□□□□ -0.75
SNF8-207ENST00000509995 RCOR1Q9UKL0 485 aa10.36□□□□□ -0.75
SNF8-207ENST00000509995 NPIPA1Q9UND3 350 aa10.36□□□□□ -0.75
SNF8-207ENST00000509995 CHKBQ9Y259 395 aa10.36□□□□□ -0.75
SNF8-207ENST00000509995 ARID1AO14497 2285 aa10.36□□□□□ -0.75
SNF8-207ENST00000509995 H7C1Q1 480 aa10.35□□□□□ -0.75
SNF8-207ENST00000509995 HAX1O00165 279 aa10.35□□□□□ -0.75
SNF8-207ENST00000509995 HCRTR1O43613 425 aa10.35□□□□□ -0.75
SNF8-207ENST00000509995 CRLF1O75462 422 aa10.35□□□□□ -0.75
SNF8-207ENST00000509995 ALBP02768 609 aa10.35□□□□□ -0.75
SNF8-207ENST00000509995 CTSBP07858 339 aa10.35□□□□□ -0.75
SNF8-207ENST00000509995 UQCRHP07919 91 aa10.35□□□□□ -0.75
SNF8-207ENST00000509995 ACPPP15309 386 aa10.35□□□□□ -0.75
SNF8-207ENST00000509995 ERCC2P18074 760 aa10.35□□□□□ -0.75
SNF8-207ENST00000509995 MMP8P22894 467 aa10.35□□□□□ -0.75
SNF8-207ENST00000509995 MMP13P45452 471 aa10.35□□□□□ -0.75
SNF8-207ENST00000509995 DCDC1P59894 354 aa10.35□□□□□ -0.75
SNF8-207ENST00000509995 VWA3BQ502W6 1294 aa10.35□□□□□ -0.75
SNF8-207ENST00000509995 ZNF766Q5HY98 468 aa10.35□□□□□ -0.75
SNF8-207ENST00000509995 ATL3Q6DD88 541 aa10.35□□□□□ -0.75
SNF8-207ENST00000509995 TTI2Q6NXR4 508 aa10.35□□□□□ -0.75
SNF8-207ENST00000509995 RFX8Q6ZV50 586 aa10.35□□□□□ -0.75
SNF8-207ENST00000509995 OVCH1Q7RTY7 1134 aa10.35□□□□□ -0.75
SNF8-207ENST00000509995 AMZ2Q86W34 360 aa10.35□□□□□ -0.75
SNF8-207ENST00000509995 TRAM1L1Q8N609 369 aa10.35□□□□□ -0.75
SNF8-207ENST00000509995 GPR26Q8NDV2 337 aa10.35□□□□□ -0.75
SNF8-207ENST00000509995 OR4E2Q8NGC2 313 aa10.35□□□□□ -0.75
SNF8-207ENST00000509995 SLC20A1Q8WUM9 679 aa10.35□□□□□ -0.75
SNF8-207ENST00000509995 NAA15Q9BXJ9 866 aaKnown RBP10.35□□□□□ -0.75
SNF8-207ENST00000509995 TDRD1Q9BXT4 1180 aaKnown RBP10.35□□□□□ -0.75
SNF8-207ENST00000509995 SLC26A1Q9H2B4 701 aa10.35□□□□□ -0.75
SNF8-207ENST00000509995 DEF6Q9H4E7 631 aa10.35□□□□□ -0.75
SNF8-207ENST00000509995 FAM60AQ9NP50 221 aa10.35□□□□□ -0.75
SNF8-207ENST00000509995 TRPS1Q9UHF7 1281 aa10.35□□□□□ -0.75
SNF8-207ENST00000509995 NXT1Q9UKK6 140 aaKnown RBP10.35□□□□□ -0.75
SNF8-207ENST00000509995 CFAP45Q9UL16 551 aa10.35□□□□□ -0.75
SNF8-207ENST00000509995 ASB1Q9Y576 335 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms