RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 TMEM150CB9EJG8 249 aa14.95□□□□□ -0.02
TPM3-219ENST00000509409 K7EM74 188 aa14.95□□□□□ -0.02
TPM3-219ENST00000509409 METTL18O95568 372 aa14.95□□□□□ -0.02
TPM3-219ENST00000509409 PRSS56P0CW18 603 aa14.95□□□□□ -0.02
TPM3-219ENST00000509409 PDHA2P29803 388 aa14.95□□□□□ -0.02
TPM3-219ENST00000509409 PRDX3P30048 256 aaKnown RBP14.95□□□□□ -0.02
TPM3-219ENST00000509409 CD151P48509 253 aa14.95□□□□□ -0.02
TPM3-219ENST00000509409 CCL11P51671 97 aa14.95□□□□□ -0.02
TPM3-219ENST00000509409 GSDMDP57764 484 aa14.95□□□□□ -0.02
TPM3-219ENST00000509409 CACNG1Q06432 222 aa14.95□□□□□ -0.02
TPM3-219ENST00000509409 SEMA5AQ13591 1074 aa14.95□□□□□ -0.02
TPM3-219ENST00000509409 UGT8Q16880 541 aa14.95□□□□□ -0.02
TPM3-219ENST00000509409 PRAMEF17Q5VTA0 474 aa14.95□□□□□ -0.02
TPM3-219ENST00000509409 SYVN1Q86TM6 617 aa14.95□□□□□ -0.02
TPM3-219ENST00000509409 TXLNBQ8N3L3 684 aa14.95□□□□□ -0.02
TPM3-219ENST00000509409 CLDN19Q8N6F1 224 aa14.95□□□□□ -0.02
TPM3-219ENST00000509409 LRRC57Q8N9N7 239 aa14.95□□□□□ -0.02
TPM3-219ENST00000509409 STYXQ8WUJ0 223 aa14.95□□□□□ -0.02
TPM3-219ENST00000509409 THAP4Q8WY91 577 aa14.95□□□□□ -0.02
TPM3-219ENST00000509409 TFGQ92734 400 aaPredicted RBP14.95□□□□□ -0.02
TPM3-219ENST00000509409 COL26A1Q96A83 441 aa14.95□□□□□ -0.02
TPM3-219ENST00000509409 CDKN2AIPNLQ96HQ2 116 aa14.95□□□□□ -0.02
TPM3-219ENST00000509409 BAG1Q99933 345 aaPredicted RBP14.95□□□□□ -0.02
TPM3-219ENST00000509409 RBSNQ9H1K0 784 aa14.95□□□□□ -0.02
TPM3-219ENST00000509409 CHST8Q9H2A9 424 aa14.95□□□□□ -0.02
TPM3-219ENST00000509409 OR52A5Q9H2C5 316 aa14.95□□□□□ -0.02
TPM3-219ENST00000509409 XKR8Q9H6D3 395 aa14.95□□□□□ -0.02
TPM3-219ENST00000509409 MVB12BQ9H7P6 319 aa14.95□□□□□ -0.02
TPM3-219ENST00000509409 PIH1D1Q9NWS0 290 aaKnown RBP14.95□□□□□ -0.02
TPM3-219ENST00000509409 SERTAD3Q9UJW9 196 aa14.95□□□□□ -0.02
TPM3-219ENST00000509409 POMT2Q9UKY4 750 aa14.95□□□□□ -0.02
TPM3-219ENST00000509409 BTRCQ9Y297 605 aa14.95□□□□□ -0.02
TPM3-219ENST00000509409 CCDC78A2IDD5 438 aa14.94□□□□□ -0.02
TPM3-219ENST00000509409 MIF4GDA9UHW6 222 aaKnown RBP14.94□□□□□ -0.02
TPM3-219ENST00000509409 MEN1O00255 615 aa14.94□□□□□ -0.02
TPM3-219ENST00000509409 BTN3A3O00478 584 aa14.94□□□□□ -0.02
TPM3-219ENST00000509409 BTN3A1O00481 513 aa14.94□□□□□ -0.02
TPM3-219ENST00000509409 DNAJB5O75953 348 aa14.94□□□□□ -0.02
TPM3-219ENST00000509409 FTCDO95954 541 aa14.94□□□□□ -0.02
TPM3-219ENST00000509409 CYP2A7P20853 494 aa14.94□□□□□ -0.02
TPM3-219ENST00000509409 KIF5AQ12840 1032 aa14.94□□□□□ -0.02
TPM3-219ENST00000509409 RPA4Q13156 261 aa14.94□□□□□ -0.02
TPM3-219ENST00000509409 GPS2Q13227 327 aa14.94□□□□□ -0.02
TPM3-219ENST00000509409 BRD3Q15059 726 aa14.94□□□□□ -0.02
TPM3-219ENST00000509409 P3H1Q32P28 736 aa14.94□□□□□ -0.02
TPM3-219ENST00000509409 KCTD11Q693B1 232 aa14.94□□□□□ -0.02
TPM3-219ENST00000509409 MICALCLQ6ZW33 695 aa14.94□□□□□ -0.02
TPM3-219ENST00000509409 AMIGO1Q86WK6 493 aa14.94□□□□□ -0.02
TPM3-219ENST00000509409 APLFQ8IW19 511 aaPredicted RBP14.94□□□□□ -0.02
TPM3-219ENST00000509409 SLC38A9Q8NBW4 561 aa14.94□□□□□ -0.02
TPM3-219ENST00000509409 OR52E1Q8NGJ3 308 aa14.94□□□□□ -0.02
TPM3-219ENST00000509409 N4BP2L2Q92802 583 aaPredicted RBP14.94□□□□□ -0.02
TPM3-219ENST00000509409 TMEM121Q9BTD3 319 aa14.94□□□□□ -0.02
TPM3-219ENST00000509409 HGH1Q9BTY7 390 aa14.94□□□□□ -0.02
TPM3-219ENST00000509409 KLHL25Q9H0H3 589 aa14.94□□□□□ -0.02
TPM3-219ENST00000509409 TFB2MQ9H5Q4 396 aaKnown RBP14.94□□□□□ -0.02
TPM3-219ENST00000509409 SYTL2Q9HCH5 934 aa14.94□□□□□ -0.02
TPM3-219ENST00000509409 ACSS2Q9NR19 701 aa14.94□□□□□ -0.02
TPM3-219ENST00000509409 LATS2Q9NRM7 1088 aa14.94□□□□□ -0.02
TPM3-219ENST00000509409 PLAAQ9Y263 795 aa14.94□□□□□ -0.02
TPM3-219ENST00000509409 IGLV3-16A0A075B6K0 115 aa14.93□□□□□ -0.02
TPM3-219ENST00000509409 TRBV5-4A0A0C4DH59 114 aa14.93□□□□□ -0.02
TPM3-219ENST00000509409 ARGFXA6NJG6 315 aa14.93□□□□□ -0.02
TPM3-219ENST00000509409 C2orf74A8MZ97 194 aa14.93□□□□□ -0.02
TPM3-219ENST00000509409 H7C0S8 307 aa14.93□□□□□ -0.02
TPM3-219ENST00000509409 AP2A2O94973 939 aa14.93□□□□□ -0.02
TPM3-219ENST00000509409 AP2A1O95782 977 aa14.93□□□□□ -0.02
TPM3-219ENST00000509409 GAS8O95995 478 aa14.93□□□□□ -0.02
TPM3-219ENST00000509409 ST6GAL1P15907 406 aa14.93□□□□□ -0.02
TPM3-219ENST00000509409 LMAN1P49257 510 aa14.93□□□□□ -0.02
TPM3-219ENST00000509409 MLLT10P55197 1068 aa14.93□□□□□ -0.02
TPM3-219ENST00000509409 CHAF1BQ13112 559 aa14.93□□□□□ -0.02
TPM3-219ENST00000509409 UBAP2LQ14157 1087 aaKnown RBP14.93□□□□□ -0.02
TPM3-219ENST00000509409 DBN1Q16643 649 aa14.93□□□□□ -0.02
TPM3-219ENST00000509409 PLEKHS1Q5SXH7 462 aa14.93□□□□□ -0.02
TPM3-219ENST00000509409 KLHDC8BQ8IXV7 354 aa14.93□□□□□ -0.02
TPM3-219ENST00000509409 PIANPQ8IYJ0 282 aa14.93□□□□□ -0.02
TPM3-219ENST00000509409 DNAAF3Q8N9W5 541 aa14.93□□□□□ -0.02
TPM3-219ENST00000509409 OR1L3Q8NH93 324 aa14.93□□□□□ -0.02
TPM3-219ENST00000509409 NRTNQ99748 197 aa14.93□□□□□ -0.02
TPM3-219ENST00000509409 TRIM55Q9BYV6 548 aa14.93□□□□□ -0.02
TPM3-219ENST00000509409 ACTR5Q9H9F9 607 aaPredicted RBP14.93□□□□□ -0.02
TPM3-219ENST00000509409 SNX7Q9UNH6 387 aa14.93□□□□□ -0.02
TPM3-219ENST00000509409 R3HDM2Q9Y2K5 976 aaKnown RBP14.93□□□□□ -0.02
TPM3-219ENST00000509409 GSTM1P09488 218 aa14.92□□□□□ -0.02
TPM3-219ENST00000509409 PVRP15151 417 aa14.92□□□□□ -0.02
TPM3-219ENST00000509409 MSNP26038 577 aaKnown RBP14.92□□□□□ -0.02
TPM3-219ENST00000509409 NSG1P42857 185 aa14.92□□□□□ -0.02
TPM3-219ENST00000509409 GDF10P55107 478 aa14.92□□□□□ -0.02
TPM3-219ENST00000509409 GSTM4Q03013 218 aa14.92□□□□□ -0.02
TPM3-219ENST00000509409 CCDC38Q502W7 563 aa14.92□□□□□ -0.02
TPM3-219ENST00000509409 IZUMO3Q5VZ72 239 aa14.92□□□□□ -0.02
TPM3-219ENST00000509409 LCN10Q6JVE6 187 aa14.92□□□□□ -0.02
TPM3-219ENST00000509409 LINC00523Q86TU6 105 aa14.92□□□□□ -0.02
TPM3-219ENST00000509409 ATCAYQ86WG3 371 aa14.92□□□□□ -0.02
TPM3-219ENST00000509409 DSELQ8IZU8 1212 aa14.92□□□□□ -0.02
TPM3-219ENST00000509409 ENDOVQ8N8Q3 282 aaKnown RBP14.92□□□□□ -0.02
TPM3-219ENST00000509409 ELMO1Q92556 727 aa14.92□□□□□ -0.02
TPM3-219ENST00000509409 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.92□□□□□ -0.02
TPM3-219ENST00000509409 LRFN5Q96NI6 719 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms