RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 SLX1AQ9BQ83 275 aa1.99□□□□□ -2.09
XRCC4-204ENST00000509268 MGME1Q9BQP7 344 aa1.99□□□□□ -2.09
XRCC4-204ENST00000509268 SLC25A23Q9BV35 468 aa1.99□□□□□ -2.09
XRCC4-204ENST00000509268 KIFC3Q9BVG8 833 aa1.99□□□□□ -2.09
XRCC4-204ENST00000509268 IFT27Q9BW83 186 aa1.99□□□□□ -2.09
XRCC4-204ENST00000509268 NPLQ9BXD5 320 aaPredicted RBP1.99□□□□□ -2.09
XRCC4-204ENST00000509268 CACNG6Q9BXT2 260 aa1.99□□□□□ -2.09
XRCC4-204ENST00000509268 MRPL1Q9BYD6 325 aaKnown RBP1.99□□□□□ -2.09
XRCC4-204ENST00000509268 GPR88Q9GZN0 384 aa1.99□□□□□ -2.09
XRCC4-204ENST00000509268 HRH4Q9H3N8 390 aa1.99□□□□□ -2.09
XRCC4-204ENST00000509268 PLK3Q9H4B4 646 aa1.99□□□□□ -2.09
XRCC4-204ENST00000509268 DNAJC18Q9H819 358 aa1.99□□□□□ -2.09
XRCC4-204ENST00000509268 MAGEE1Q9HCI5 957 aa1.99□□□□□ -2.09
XRCC4-204ENST00000509268 PFDN4Q9NQP4 134 aa1.99□□□□□ -2.09
XRCC4-204ENST00000509268 NINJ2Q9NZG7 142 aa1.99□□□□□ -2.09
XRCC4-204ENST00000509268 CRNNQ9UBG3 495 aaPredicted RBP1.99□□□□□ -2.09
XRCC4-204ENST00000509268 CNOT8Q9UFF9 292 aaKnown RBP1.99□□□□□ -2.09
XRCC4-204ENST00000509268 FETUBQ9UGM5 382 aa1.99□□□□□ -2.09
XRCC4-204ENST00000509268 PLAGL1Q9UM63 463 aa1.99□□□□□ -2.09
XRCC4-204ENST00000509268 MTMR6Q9Y217 621 aa1.99□□□□□ -2.09
XRCC4-204ENST00000509268 LIPGQ9Y5X9 500 aa1.99□□□□□ -2.09
XRCC4-204ENST00000509268 LRRD1A4D1F6 860 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 DDTLA6NHG4 134 aaPredicted RBP1.98□□□□□ -2.09
XRCC4-204ENST00000509268 EIF3CLB5ME19 914 aaKnown RBP1.98□□□□□ -2.09
XRCC4-204ENST00000509268 HHLA1C9JL84 531 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 H7C423 109 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 MPHOSPH10O00566 681 aaKnown RBP1.98□□□□□ -2.09
XRCC4-204ENST00000509268 NDC80O14777 642 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 ZNF263O14978 683 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 PGRMC2O15173 223 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 VEGFDO43915 354 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 SMPD2O60906 423 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 MITFO75030 526 aaPredicted RBP1.98□□□□□ -2.09
XRCC4-204ENST00000509268 RTN2O75298 545 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 SIX3O95343 332 aaPredicted RBP1.98□□□□□ -2.09
XRCC4-204ENST00000509268 HEXAP06865 529 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 TPM2P07951 284 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 ZFYP08048 801 aaPredicted RBP1.98□□□□□ -2.09
XRCC4-204ENST00000509268 SRPRAP08240 638 aaKnown RBP1.98□□□□□ -2.09
XRCC4-204ENST00000509268 DPEP1P16444 411 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 CASTP20810 708 aaKnown RBP1.98□□□□□ -2.09
XRCC4-204ENST00000509268 CBLP22681 906 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 PON1P27169 355 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 CHRNB4P30926 498 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 HOXA13P31271 388 aaPredicted RBP1.98□□□□□ -2.09
XRCC4-204ENST00000509268 CASP3P42574 277 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 RPS6KA3P51812 740 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 BMXP51813 675 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 BRWD1-AS2P59051 145 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 HTD2P86397 168 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 CBX3Q13185 183 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 ALKBH1Q13686 389 aaKnown RBP1.98□□□□□ -2.09
XRCC4-204ENST00000509268 FGFBP1Q14512 234 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 RNPS1Q15287 305 aaKnown RBP1.98□□□□□ -2.09
XRCC4-204ENST00000509268 C15orf59Q2T9L4 293 aaPredicted RBP1.98□□□□□ -2.09
XRCC4-204ENST00000509268 COL28A1Q2UY09 1125 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 ANKDD1AQ495B1 522 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 KRT79Q5XKE5 535 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 TXNDC8Q6A555 127 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 ZCCHC12Q6PEW1 402 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 MOB3CQ70IA8 216 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 CAMKMTQ7Z624 323 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 ZER1Q7Z7L7 766 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 TADA2BQ86TJ2 420 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 TRIM74Q86UV6 250 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 TRIM73Q86UV7 250 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 FAM160B2Q86V87 743 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 PEX5LQ8IYB4 626 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 CPXM2Q8N436 756 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 CAMKVQ8NCB2 501 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 HJURPQ8NCD3 748 aaPredicted RBP1.98□□□□□ -2.09
XRCC4-204ENST00000509268 C11orf65Q8NCR3 313 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 WDR20Q8TBZ3 569 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 PTPMT1Q8WUK0 201 aaPredicted RBP1.98□□□□□ -2.09
XRCC4-204ENST00000509268 ZFAND2BQ8WV99 257 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 TRIM44Q96DX7 344 aaPredicted RBP1.98□□□□□ -2.09
XRCC4-204ENST00000509268 POM121L2Q96KW2 1035 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 ART5Q96L15 291 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 C16orf45Q96MC5 204 aaPredicted RBP1.98□□□□□ -2.09
XRCC4-204ENST00000509268 NEK1Q96PY6 1258 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 SPXQ9BT56 116 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 MLPHQ9BV36 600 aaPredicted RBP1.98□□□□□ -2.09
XRCC4-204ENST00000509268 NUP85Q9BW27 656 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 TEX13BQ9BXU2 312 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 TRIM31Q9BZY9 425 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 TRIM7Q9C029 511 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 C1orf21Q9H246 121 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 IL1RAPL2Q9NP60 686 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 SLC6A13Q9NSD5 602 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 ARHGEF38Q9NXL2 777 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 GDE1Q9NZC3 331 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 OR6C3Q9NZP0 311 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 CNIH4Q9P003 139 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 ACTR3BQ9P1U1 418 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 KIAA1456Q9P272 454 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 UPB1Q9UBR1 384 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 AMACRQ9UHK6 382 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 HAO1Q9UJM8 370 aa1.98□□□□□ -2.09
XRCC4-204ENST00000509268 CPSF3Q9UKF6 684 aaKnown RBP1.98□□□□□ -2.09
XRCC4-204ENST00000509268 APPL1Q9UKG1 709 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms