RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 DR1Q01658 176 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 HHEXQ03014 270 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 SRSF6Q13247 344 aaKnown RBP7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 GPR18Q14330 331 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 GRB7Q14451 532 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 GBX1Q14549 363 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 CRYMQ14894 314 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 RTP5Q14D33 572 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 GPR33Q49SQ1 333 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 ANKRD20A4Q4UJ75 823 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 ZNF385CQ66K41 422 aaPredicted RBP7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 CAPRIN2Q6IMN6 1127 aaKnown RBP7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 WASH2PQ6VEQ5 465 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 CERS6Q6ZMG9 384 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 RBM44Q6ZP01 1051 aaKnown RBP7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 TMEM135Q86UB9 458 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 DENND6AQ8IWF6 608 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 RCBTB1Q8NDN9 531 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 ACVR1CQ8NER5 493 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 OR2L2Q8NH16 312 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 FLVCR1-AS1Q8TAF5 88 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 HM13Q8TCT9 377 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 ZCCHC14Q8WYQ9 949 aaKnown RBP7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 ANP32BQ92688 251 aaKnown RBP7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 ULK4Q96C45 1275 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 RNF31Q96EP0 1072 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 SGSM3Q96HU1 749 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 CCDC74BQ96LY2 380 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 BIRC8Q96P09 236 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 COPS8Q99627 209 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 MENTQ9BUN1 341 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 TRIM31Q9BZY9 425 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 IL22Q9GZX6 179 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 EPB41L5Q9HCM4 733 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 WASH6PQ9NQA3 447 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 SMYD2Q9NRG4 433 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 HOMER3Q9NSC5 361 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 SIDT1Q9NXL6 827 aaKnown RBP7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 CPNE7Q9UBL6 633 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 ASIC3Q9UHC3 531 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 SATB2Q9UPW6 733 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 DYRK1BQ9Y463 629 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 MRFAP1Q9Y605 127 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 SNRNP200O75643 2136 aaKnown RBP7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 PTPRQQ9UMZ3 2332 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 SDK2Q58EX2 2172 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 UNC13CQ8NB66 2214 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 FAM237BA0A1B0GVD1 139 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 ESYT3A0FGR9 886 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 MGAT4DA6NG13 374 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 E7ESA3 106 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 KIF1CO43896 1103 aaKnown RBP7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 NIPSNAP2O75323 286 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 TCEA3O75764 348 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 PIAS1O75925 651 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 VAPBO95292 243 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 MLNP12872 115 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 CCL4P13236 92 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 ATP1B2P14415 290 aaPredicted RBP7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 PNLIPP16233 465 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 XRCC1P18887 633 aaPredicted RBP7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 MSH3P20585 1137 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 ACADLP28330 430 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 CCKBRP32239 447 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 LSSP48449 732 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 CDK16Q00536 496 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 PDE1BQ01064 536 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 CYP4F3Q08477 520 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 BOP1Q14137 746 aaKnown RBP7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 AMZ1Q400G9 498 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 CCSMST1Q4G0I0 132 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 C3orf38Q5JPI3 329 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 METRNLQ641Q3 311 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 STEAP4Q687X5 459 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 DUPD1Q68J44 220 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 FBXO38Q6PIJ6 1188 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 UNC5AQ6ZN44 842 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 USP53Q70EK8 1073 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 TAS2R42Q7RTR8 314 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 AMZ2Q86W34 360 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 PROSER1Q86XN7 944 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 RASGRP3Q8IV61 690 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 PPIL6Q8IXY8 311 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 CACTIN-AS1Q8N1I8 211 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 BMPERQ8N8U9 685 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 OR4L1Q8NH43 312 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 EPS8L3Q8TE67 593 aaKnown RBP7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 PEX13Q92968 403 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 FAM136AQ96C01 138 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 LIN37Q96GY3 246 aaPredicted RBP7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 DPH5Q9H2P9 285 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 SYNPO2LQ9H987 977 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 SLC40A1Q9NP59 571 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 CATSPERZQ9NTU4 200 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 FOXJ2Q9P0K8 574 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 RAXQ9Y2V3 346 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 SNX24Q9Y343 169 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 AHCTF1Q8WYP5 2266 aa7.03□□□□□ -1.28
TOPBP1-207ENST00000509162 PCSK5Q92824 1860 aa7.02□□□□□ -1.28
TOPBP1-207ENST00000509162 KIR2DS5A0A0G2JLQ3 304 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms