RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 IL2P60568 153 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 UFM1P61960 85 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 PHC1P78364 1004 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 PPP2R2BQ00005 443 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 IL5RAQ01344 420 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZNF45Q02386 682 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 CYP4F3Q08477 520 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 CD47Q08722 323 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 TRAF3Q13114 568 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 SEMA3AQ14563 771 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZNF235Q14590 738 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 PCBP2Q15366 365 aaKnown RBP eCLIP4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 TEAD4Q15561 434 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 OR4D1Q15615 310 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 CTF1Q16619 201 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 MAPKAPK3Q16644 382 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 IMPG1Q17R60 797 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZNF789Q5FWF6 425 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 SIRPB2Q5JXA9 342 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 PERM1Q5SV97 790 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 SYT6Q5T7P8 510 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 ATAD3BQ5T9A4 648 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 PRAMEF18Q5VWM3 479 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 SLX4IPQ5VYV7 408 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZNF280DQ6N043 979 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 FAM171BQ6P995 826 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 TTC23LQ6PF05 361 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 SHQ1Q6PI26 577 aaKnown RBP4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 CYP20A1Q6UW02 462 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 SPESP1Q6UW49 350 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 SLC16A12Q6ZSM3 486 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 MSANTD1Q6ZTZ1 278 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 RPS27LQ71UM5 84 aaKnown RBP4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 BHLHA9Q7RTU4 235 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 GPRIN1Q7Z2K8 1008 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 KDELC2Q7Z4H8 507 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 GPR149Q86SP6 731 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 ADAMTSL2Q86TH1 951 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 SYVN1Q86TM6 617 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 ITIH5Q86UX2 942 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 PIM3Q86V86 326 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 SPATA2LQ8IUW3 424 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 MICU2Q8IYU8 434 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 MFSD4AQ8N468 514 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 DTWD1Q8N5C7 304 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 AMER2Q8N7J2 671 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 ARRDC4Q8NCT1 418 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 SMG8Q8ND04 991 aaKnown RBP4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 KBTBD8Q8NFY9 601 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 FAM110BQ8TC76 370 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 PROKR1Q8TCW9 393 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 MCOLN3Q8TDD5 553 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 CHAC2Q8WUX2 184 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 SLC13A3Q8WWT9 602 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 TRIB2Q92519 343 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 FIG4Q92562 907 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 NCLNQ969V3 563 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 YIPF6Q96EC8 236 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 ABHD17AQ96GS6 310 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 REXO5Q96IC2 774 aaKnown RBP4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 TXNDC15Q96J42 360 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 TBATAQ96M53 351 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 NSMCE3Q96MG7 304 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 UROC1Q96N76 676 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 TMEM74Q96NL1 305 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 KCNA7Q96RP8 456 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 CSF3RQ99062 836 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 CTRCQ99895 268 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 THUMPD3Q9BV44 507 aaKnown RBP4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 KATNAL1Q9BW62 490 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 CCDC90BQ9GZT6 254 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 CXCL16Q9H2A7 254 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 ATXN3LQ9H3M9 355 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 ABHD16BQ9H3Z7 469 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 FBXO44Q9H4M3 255 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 ARMC7Q9H6L4 198 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 ATP13A3Q9H7F0 1226 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 GOLGA2P5Q9HBQ8 144 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 NEUROD4Q9HD90 331 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 TXNRD2Q9NNW7 524 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 TLR9Q9NR96 1032 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 OLA1Q9NTK5 396 aaKnown RBP4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 INTS7Q9NVH2 962 aaKnown RBP4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 NLE1Q9NVX2 485 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 THG1LQ9NWX6 298 aaKnown RBP4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 ASIC5Q9NY37 505 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 NPAP1Q9NZP6 1156 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 SPATA7Q9P0W8 599 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 MARCH4Q9P2E8 410 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 UXTQ9UBK9 157 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZNF229Q9UJW7 825 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 RPS6KA6Q9UK32 745 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 PCTPQ9UKL6 214 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 INTS6Q9UL03 887 aaKnown RBP4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 SAMD4AQ9UPU9 718 aaKnown RBP4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 IFT52Q9Y366 437 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 PCDHGC4Q9Y5F7 938 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 PCDHGA8Q9Y5G5 932 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms