RNA–Protein interactions for RNA: ENST00000507845.5

UBE2D3-221, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-221ENST00000507845 SLC30A4O14863 429 aa13.15□□□□□ -0.3
UBE2D3-221ENST00000507845 TM4SF5O14894 197 aa13.15□□□□□ -0.3
UBE2D3-221ENST00000507845 WISP3O95389 354 aaPredicted RBP13.15□□□□□ -0.3
UBE2D3-221ENST00000507845 LDOC1O95751 146 aaPredicted RBP13.15□□□□□ -0.3
UBE2D3-221ENST00000507845 MTHFD1P11586 935 aaKnown RBP13.15□□□□□ -0.3
UBE2D3-221ENST00000507845 XRCC1P18887 633 aaPredicted RBP13.15□□□□□ -0.3
UBE2D3-221ENST00000507845 SLC19A1P41440 591 aa13.15□□□□□ -0.3
UBE2D3-221ENST00000507845 UBE2IP63279 158 aaKnown RBP13.15□□□□□ -0.3
UBE2D3-221ENST00000507845 ZNF460Q14592 562 aa13.15□□□□□ -0.3
UBE2D3-221ENST00000507845 USP10Q14694 798 aaKnown RBP13.15□□□□□ -0.3
UBE2D3-221ENST00000507845 NR0B2Q15466 257 aa13.15□□□□□ -0.3
UBE2D3-221ENST00000507845 ZKSCAN8Q15776 578 aaPredicted RBP13.15□□□□□ -0.3
UBE2D3-221ENST00000507845 BEND6Q5SZJ8 279 aaPredicted RBP13.15□□□□□ -0.3
UBE2D3-221ENST00000507845 MROH9Q5TGP6 573 aa13.15□□□□□ -0.3
UBE2D3-221ENST00000507845 DUS1LQ6P1R4 473 aaKnown RBP13.15□□□□□ -0.3
UBE2D3-221ENST00000507845 TMEM207Q6UWW9 146 aa13.15□□□□□ -0.3
UBE2D3-221ENST00000507845 TAOK1Q7L7X3 1001 aa13.15□□□□□ -0.3
UBE2D3-221ENST00000507845 ARL14Q8N4G2 192 aa13.15□□□□□ -0.3
UBE2D3-221ENST00000507845 OR2W6PQ8NHA6 318 aa13.15□□□□□ -0.3
UBE2D3-221ENST00000507845 MAPK15Q8TD08 544 aa13.15□□□□□ -0.3
UBE2D3-221ENST00000507845 HNRNPLLQ8WVV9 542 aaKnown RBP13.15□□□□□ -0.3
UBE2D3-221ENST00000507845 ZDHHC16Q969W1 377 aa13.15□□□□□ -0.3
UBE2D3-221ENST00000507845 TSPAN17Q96FV3 270 aa13.15□□□□□ -0.3
UBE2D3-221ENST00000507845 CNDP2Q96KP4 475 aaKnown RBP13.15□□□□□ -0.3
UBE2D3-221ENST00000507845 C12orf66Q96MD2 445 aa13.15□□□□□ -0.3
UBE2D3-221ENST00000507845 POPDC3Q9HBV1 291 aa13.15□□□□□ -0.3
UBE2D3-221ENST00000507845 NCKIPSDQ9NZQ3 722 aa13.15□□□□□ -0.3
UBE2D3-221ENST00000507845 CPNE7Q9UBL6 633 aa13.15□□□□□ -0.3
UBE2D3-221ENST00000507845 FTSJ1Q9UET6 329 aa13.15□□□□□ -0.3
UBE2D3-221ENST00000507845 PADI4Q9UM07 663 aa13.15□□□□□ -0.3
UBE2D3-221ENST00000507845 PCDHGA10Q9Y5H3 936 aa13.15□□□□□ -0.3
UBE2D3-221ENST00000507845 CFAP20Q9Y6A4 193 aaKnown RBP13.15□□□□□ -0.3
UBE2D3-221ENST00000507845 CFAP54Q96N23 3096 aa13.15□□□□□ -0.3
UBE2D3-221ENST00000507845 PRAMEF33A0A0G2JMD5 474 aa13.14□□□□□ -0.31
UBE2D3-221ENST00000507845 EIF3FO00303 357 aaPredicted RBP13.14□□□□□ -0.31
UBE2D3-221ENST00000507845 IFRD1O00458 451 aaPredicted RBP13.14□□□□□ -0.31
UBE2D3-221ENST00000507845 PHGDHO43175 533 aaKnown RBP13.14□□□□□ -0.31
UBE2D3-221ENST00000507845 TCEA3O75764 348 aa13.14□□□□□ -0.31
UBE2D3-221ENST00000507845 KRT38O76015 456 aa13.14□□□□□ -0.31
UBE2D3-221ENST00000507845 TSPAN12O95859 305 aa13.14□□□□□ -0.31
UBE2D3-221ENST00000507845 CBSLP0DN79 551 aa13.14□□□□□ -0.31
UBE2D3-221ENST00000507845 CKMT1AP12532 417 aa13.14□□□□□ -0.31
UBE2D3-221ENST00000507845 ENO3P13929 434 aaPredicted RBP13.14□□□□□ -0.31
UBE2D3-221ENST00000507845 CNTFP26441 200 aa13.14□□□□□ -0.31
UBE2D3-221ENST00000507845 CBSP35520 551 aa13.14□□□□□ -0.31
UBE2D3-221ENST00000507845 FASLGP48023 281 aa13.14□□□□□ -0.31
UBE2D3-221ENST00000507845 RPIAP49247 311 aa13.14□□□□□ -0.31
UBE2D3-221ENST00000507845 SLC12A2P55011 1212 aa13.14□□□□□ -0.31
UBE2D3-221ENST00000507845 RAB10P61026 200 aa13.14□□□□□ -0.31
UBE2D3-221ENST00000507845 ABRQ12979 859 aa13.14□□□□□ -0.31
UBE2D3-221ENST00000507845 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.14□□□□□ -0.31
UBE2D3-221ENST00000507845 NEK10Q6ZWH5 1172 aa13.14□□□□□ -0.31
UBE2D3-221ENST00000507845 CMC1Q7Z7K0 106 aa13.14□□□□□ -0.31
UBE2D3-221ENST00000507845 SLC9B2Q86UD5 537 aa13.14□□□□□ -0.31
UBE2D3-221ENST00000507845 TDRPQ86YL5 185 aa13.14□□□□□ -0.31
UBE2D3-221ENST00000507845 EEF1AKMT1Q8WVE0 214 aa13.14□□□□□ -0.31
UBE2D3-221ENST00000507845 TFGQ92734 400 aaPredicted RBP13.14□□□□□ -0.31
UBE2D3-221ENST00000507845 CXorf40BQ96DE9 158 aa13.14□□□□□ -0.31
UBE2D3-221ENST00000507845 CDC6Q99741 560 aa13.14□□□□□ -0.31
UBE2D3-221ENST00000507845 PPCSQ9HAB8 311 aa13.14□□□□□ -0.31
UBE2D3-221ENST00000507845 IMP3Q9NV31 184 aaKnown RBP13.14□□□□□ -0.31
UBE2D3-221ENST00000507845 PSMC3IPQ9P2W1 217 aaPredicted RBP13.14□□□□□ -0.31
UBE2D3-221ENST00000507845 TSR3Q9UJK0 312 aaKnown RBP13.14□□□□□ -0.31
UBE2D3-221ENST00000507845 PLAAQ9Y263 795 aa13.14□□□□□ -0.31
UBE2D3-221ENST00000507845 PPM1DO15297 605 aa13.13□□□□□ -0.31
UBE2D3-221ENST00000507845 MATN4O95460 622 aa13.13□□□□□ -0.31
UBE2D3-221ENST00000507845 VIPP01282 170 aa13.13□□□□□ -0.31
UBE2D3-221ENST00000507845 ALDOAP04075 364 aaKnown RBP13.13□□□□□ -0.31
UBE2D3-221ENST00000507845 SNRPAP09012 282 aaKnown RBP13.13□□□□□ -0.31
UBE2D3-221ENST00000507845 MPC1LP0DKB6 136 aa13.13□□□□□ -0.31
UBE2D3-221ENST00000507845 H2AFXP16104 143 aaPredicted RBP13.13□□□□□ -0.31
UBE2D3-221ENST00000507845 STMN1P16949 149 aa13.13□□□□□ -0.31
UBE2D3-221ENST00000507845 ZNF37AP17032 561 aaPredicted RBP13.13□□□□□ -0.31
UBE2D3-221ENST00000507845 CKMT2P17540 419 aa13.13□□□□□ -0.31
UBE2D3-221ENST00000507845 RGS4P49798 205 aa13.13□□□□□ -0.31
UBE2D3-221ENST00000507845 SERPINB8P50452 374 aa13.13□□□□□ -0.31
UBE2D3-221ENST00000507845 CSRP3P50461 194 aa13.13□□□□□ -0.31
UBE2D3-221ENST00000507845 IL2P60568 153 aa13.13□□□□□ -0.31
UBE2D3-221ENST00000507845 DAB2P98082 770 aa13.13□□□□□ -0.31
UBE2D3-221ENST00000507845 HHEXQ03014 270 aa13.13□□□□□ -0.31
UBE2D3-221ENST00000507845 RASA2Q15283 850 aa13.13□□□□□ -0.31
UBE2D3-221ENST00000507845 GUSBP11Q6P575 273 aa13.13□□□□□ -0.31
UBE2D3-221ENST00000507845 UNC5DQ6UXZ4 953 aa13.13□□□□□ -0.31
UBE2D3-221ENST00000507845 CYHR1Q6ZMK1 362 aa13.13□□□□□ -0.31
UBE2D3-221ENST00000507845 PIWIL4Q7Z3Z4 852 aaKnown RBP13.13□□□□□ -0.31
UBE2D3-221ENST00000507845 TRIM48Q8IWZ4 208 aa13.13□□□□□ -0.31
UBE2D3-221ENST00000507845 AVL9Q8NBF6 648 aa13.13□□□□□ -0.31
UBE2D3-221ENST00000507845 PHC3Q8NDX5 983 aa13.13□□□□□ -0.31
UBE2D3-221ENST00000507845 DEFB124Q8NES8 71 aa13.13□□□□□ -0.31
UBE2D3-221ENST00000507845 EPS8L3Q8TE67 593 aaKnown RBP13.13□□□□□ -0.31
UBE2D3-221ENST00000507845 ISL2Q96A47 359 aa13.13□□□□□ -0.31
UBE2D3-221ENST00000507845 LINGO1Q96FE5 620 aa13.13□□□□□ -0.31
UBE2D3-221ENST00000507845 GPAMQ9HCL2 828 aa13.13□□□□□ -0.31
UBE2D3-221ENST00000507845 SNX15Q9NRS6 342 aa13.13□□□□□ -0.31
UBE2D3-221ENST00000507845 POT1Q9NUX5 634 aa13.13□□□□□ -0.31
UBE2D3-221ENST00000507845 EURLQ9NYK6 297 aa13.13□□□□□ -0.31
UBE2D3-221ENST00000507845 CTNNAL1Q9UBT7 734 aa13.13□□□□□ -0.31
UBE2D3-221ENST00000507845 CDV3Q9UKY7 258 aaKnown RBP13.13□□□□□ -0.31
UBE2D3-221ENST00000507845 RUVBL2Q9Y230 463 aaKnown RBP13.13□□□□□ -0.31
UBE2D3-221ENST00000507845 HEBP2Q9Y5Z4 205 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms