RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 FMO5P49326 533 aa3.85□□□□□ -1.79
HMGB1P28-201ENST00000507778 TPD52P55327 224 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P28-201ENST00000507778 PITX1P78337 314 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P28-201ENST00000507778 RBPJQ06330 500 aa3.85□□□□□ -1.79
HMGB1P28-201ENST00000507778 PNRC1Q12796 327 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P28-201ENST00000507778 TFCP2Q12800 502 aa3.85□□□□□ -1.79
HMGB1P28-201ENST00000507778 GAGE5Q13069 117 aa3.85□□□□□ -1.79
HMGB1P28-201ENST00000507778 GAGE6Q13070 117 aa3.85□□□□□ -1.79
HMGB1P28-201ENST00000507778 KLHL26Q53HC5 615 aa3.85□□□□□ -1.79
HMGB1P28-201ENST00000507778 MDH1BQ5I0G3 518 aa3.85□□□□□ -1.79
HMGB1P28-201ENST00000507778 PDSS1Q5T2R2 415 aa3.85□□□□□ -1.79
HMGB1P28-201ENST00000507778 PLA2G4FQ68DD2 849 aa3.85□□□□□ -1.79
HMGB1P28-201ENST00000507778 IL27RAQ6UWB1 636 aa3.85□□□□□ -1.79
HMGB1P28-201ENST00000507778 KCTD8Q6ZWB6 473 aa3.85□□□□□ -1.79
HMGB1P28-201ENST00000507778 TMPRSS11FQ6ZWK6 438 aa3.85□□□□□ -1.79
HMGB1P28-201ENST00000507778 ERN2Q76MJ5 926 aaKnown RBP3.85□□□□□ -1.79
HMGB1P28-201ENST00000507778 DET1Q7L5Y6 550 aa3.85□□□□□ -1.79
HMGB1P28-201ENST00000507778 DSG4Q86SJ6 1040 aa3.85□□□□□ -1.79
HMGB1P28-201ENST00000507778 SLC9B2Q86UD5 537 aa3.85□□□□□ -1.79
HMGB1P28-201ENST00000507778 COMMD2Q86X83 199 aa3.85□□□□□ -1.79
HMGB1P28-201ENST00000507778 MFN1Q8IWA4 741 aa3.85□□□□□ -1.79
HMGB1P28-201ENST00000507778 NAGSQ8N159 534 aa3.85□□□□□ -1.79
HMGB1P28-201ENST00000507778 SLC4A11Q8NBS3 891 aa3.85□□□□□ -1.79
HMGB1P28-201ENST00000507778 POC1AQ8NBT0 407 aa3.85□□□□□ -1.79
HMGB1P28-201ENST00000507778 SIPA1Q96FS4 1042 aa3.85□□□□□ -1.79
HMGB1P28-201ENST00000507778 BTBD10Q9BSF8 475 aa3.85□□□□□ -1.79
HMGB1P28-201ENST00000507778 EDEM3Q9BZQ6 932 aa3.85□□□□□ -1.79
HMGB1P28-201ENST00000507778 ACKR4Q9NPB9 350 aa3.85□□□□□ -1.79
HMGB1P28-201ENST00000507778 ABCF3Q9NUQ8 709 aa3.85□□□□□ -1.79
HMGB1P28-201ENST00000507778 TTC3P53804 2025 aa3.84□□□□□ -1.79
HMGB1P28-201ENST00000507778 FEZF1A0PJY2 475 aa3.84□□□□□ -1.79
HMGB1P28-201ENST00000507778 TMEM221A6NGB7 291 aa3.84□□□□□ -1.79
HMGB1P28-201ENST00000507778 SMTNL1A8MU46 457 aa3.84□□□□□ -1.79
HMGB1P28-201ENST00000507778 PRR32B1ATL7 298 aa3.84□□□□□ -1.79
HMGB1P28-201ENST00000507778 TRIM77I1YAP6 450 aa3.84□□□□□ -1.79
HMGB1P28-201ENST00000507778 OR10H2O60403 315 aa3.84□□□□□ -1.79
HMGB1P28-201ENST00000507778 BAG4O95429 457 aaKnown RBP3.84□□□□□ -1.79
HMGB1P28-201ENST00000507778 OR52Z1P0C646 297 aa3.84□□□□□ -1.79
HMGB1P28-201ENST00000507778 CBLP22681 906 aa3.84□□□□□ -1.79
HMGB1P28-201ENST00000507778 DGKAP23743 735 aa3.84□□□□□ -1.79
HMGB1P28-201ENST00000507778 CCR10P46092 362 aa3.84□□□□□ -1.79
HMGB1P28-201ENST00000507778 HOXA1P49639 335 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P28-201ENST00000507778 HNRNPKP61978 463 aaKnown RBP eCLIP3.84□□□□□ -1.79
HMGB1P28-201ENST00000507778 RPS18P62269 152 aaKnown RBP3.84□□□□□ -1.79
HMGB1P28-201ENST00000507778 POU5F1Q01860 360 aaKnown RBP3.84□□□□□ -1.79
HMGB1P28-201ENST00000507778 HYAL4Q2M3T9 481 aa3.84□□□□□ -1.79
HMGB1P28-201ENST00000507778 SIRPB2Q5JXA9 342 aa3.84□□□□□ -1.79
HMGB1P28-201ENST00000507778 CAPRIN2Q6IMN6 1127 aaKnown RBP3.84□□□□□ -1.79
HMGB1P28-201ENST00000507778 LINGO4Q6UY18 593 aa3.84□□□□□ -1.79
HMGB1P28-201ENST00000507778 ZNF852Q6ZMS4 543 aa3.84□□□□□ -1.79
HMGB1P28-201ENST00000507778 DGLUCYQ7Z3D6 616 aa3.84□□□□□ -1.79
HMGB1P28-201ENST00000507778 ADCK2Q7Z695 626 aa3.84□□□□□ -1.79
HMGB1P28-201ENST00000507778 ANKRD23Q86SG2 305 aa3.84□□□□□ -1.79
HMGB1P28-201ENST00000507778 FAM114A1Q8IWE2 563 aa3.84□□□□□ -1.79
HMGB1P28-201ENST00000507778 GPALPP1Q8IXQ4 340 aa3.84□□□□□ -1.79
HMGB1P28-201ENST00000507778 CEP57L1Q8IYX8 460 aa3.84□□□□□ -1.79
HMGB1P28-201ENST00000507778 CPSF7Q8N684 471 aaKnown RBP3.84□□□□□ -1.79
HMGB1P28-201ENST00000507778 METTL27Q8N6F8 245 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P28-201ENST00000507778 NKAIN3Q8N8D7 197 aa3.84□□□□□ -1.79
HMGB1P28-201ENST00000507778 MAB21L3Q8N8X9 362 aa3.84□□□□□ -1.79
HMGB1P28-201ENST00000507778 SPATA20Q8TB22 786 aa3.84□□□□□ -1.79
HMGB1P28-201ENST00000507778 CD101Q93033 1021 aa3.84□□□□□ -1.79
HMGB1P28-201ENST00000507778 ZNF558Q96NG5 402 aa3.84□□□□□ -1.79
HMGB1P28-201ENST00000507778 GBP5Q96PP8 586 aa3.84□□□□□ -1.79
HMGB1P28-201ENST00000507778 FAM129AQ9BZQ8 928 aa3.84□□□□□ -1.79
HMGB1P28-201ENST00000507778 RETREG1Q9H6L5 497 aa3.84□□□□□ -1.79
HMGB1P28-201ENST00000507778 SH3GLB2Q9NR46 395 aa3.84□□□□□ -1.79
HMGB1P28-201ENST00000507778 SLC38A7Q9NVC3 462 aa3.84□□□□□ -1.79
HMGB1P28-201ENST00000507778 PADI2Q9Y2J8 665 aa3.84□□□□□ -1.79
HMGB1P28-201ENST00000507778 IGLV5-45A0A087WSX0 123 aa3.83□□□□□ -1.8
HMGB1P28-201ENST00000507778 A0A1W2PPI3 338 aa3.83□□□□□ -1.8
HMGB1P28-201ENST00000507778 HYKKA2RU49 373 aa3.83□□□□□ -1.8
HMGB1P28-201ENST00000507778 C16orf97H3BN30 126 aa3.83□□□□□ -1.8
HMGB1P28-201ENST00000507778 CAPN9O14815 690 aa3.83□□□□□ -1.8
HMGB1P28-201ENST00000507778 CTSVO60911 334 aa3.83□□□□□ -1.8
HMGB1P28-201ENST00000507778 IGHV4-39P01824 125 aa3.83□□□□□ -1.8
HMGB1P28-201ENST00000507778 RAB40ALP0C0E4 278 aa3.83□□□□□ -1.8
HMGB1P28-201ENST00000507778 TGFB3P10600 412 aa3.83□□□□□ -1.8
HMGB1P28-201ENST00000507778 ACP2P11117 423 aa3.83□□□□□ -1.8
HMGB1P28-201ENST00000507778 TKTP29401 623 aaKnown RBP3.83□□□□□ -1.8
HMGB1P28-201ENST00000507778 HSPA4P34932 840 aa3.83□□□□□ -1.8
HMGB1P28-201ENST00000507778 LIMK1P53667 647 aa3.83□□□□□ -1.8
HMGB1P28-201ENST00000507778 DVL1P1P54792 670 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P28-201ENST00000507778 ROR1Q01973 937 aa3.83□□□□□ -1.8
HMGB1P28-201ENST00000507778 POU3F1Q03052 451 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P28-201ENST00000507778 MBTD1Q05BQ5 628 aa3.83□□□□□ -1.8
HMGB1P28-201ENST00000507778 MFAP5Q13361 173 aa3.83□□□□□ -1.8
HMGB1P28-201ENST00000507778 PPIGQ13427 754 aaKnown RBP eCLIP3.83□□□□□ -1.8
HMGB1P28-201ENST00000507778 KIR2DS3Q14952 304 aa3.83□□□□□ -1.8
HMGB1P28-201ENST00000507778 FAM47EQ6ZV65 393 aa3.83□□□□□ -1.8
HMGB1P28-201ENST00000507778 THNSL1Q8IYQ7 743 aa3.83□□□□□ -1.8
HMGB1P28-201ENST00000507778 CRYBG2Q8N1P7 616 aa3.83□□□□□ -1.8
HMGB1P28-201ENST00000507778 OR13A1Q8NGR1 328 aa3.83□□□□□ -1.8
HMGB1P28-201ENST00000507778 RNF128Q8TEB7 428 aa3.83□□□□□ -1.8
HMGB1P28-201ENST00000507778 ROBO4Q8WZ75 1007 aa3.83□□□□□ -1.8
HMGB1P28-201ENST00000507778 SGK494Q96LW2 274 aa3.83□□□□□ -1.8
HMGB1P28-201ENST00000507778 C17orf77Q96MU5 243 aa3.83□□□□□ -1.8
HMGB1P28-201ENST00000507778 LRRC3BQ96PB8 259 aa3.83□□□□□ -1.8
HMGB1P28-201ENST00000507778 SPAG5Q96R06 1193 aa3.83□□□□□ -1.8
HMGB1P28-201ENST00000507778 VN1R1Q9GZP7 353 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms