RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.91□□□□□ -1.14
SCN1A-207ENST00000507401 AKAP7Q9P0M2 348 aaPredicted RBP7.91□□□□□ -1.14
SCN1A-207ENST00000507401 SEPT10Q9P0V9 454 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 SAE1Q9UBE0 346 aaPredicted RBP7.91□□□□□ -1.14
SCN1A-207ENST00000507401 ZNHIT2Q9UHR6 403 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 PCDHA3Q9Y5H8 950 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 KIF26BQ2KJY2 2108 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 PTPRQQ9UMZ3 2332 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 ATRXP46100 2492 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 hCG_1818297A0A087WSY0 165 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 SMIM31A0A1B0GVY4 71 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 DPPA5A6NC42 116 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 FADS2P1A8MWK0 482 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 PPM1DO15297 605 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 INPP4BO15327 924 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 BIRC5O15392 142 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 KLK10O43240 276 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 GRID2O43424 1007 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 ZNF189O75820 626 aaPredicted RBP7.9□□□□□ -1.14
SCN1A-207ENST00000507401 UBOX5O94941 541 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 SLC25A14O95258 325 aaPredicted RBP7.9□□□□□ -1.14
SCN1A-207ENST00000507401 MT-CYBP00156 380 aaPredicted RBP7.9□□□□□ -1.14
SCN1A-207ENST00000507401 JMJD7P0C870 316 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 SLC2A4P14672 509 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 ALDH4A1P30038 563 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 SERPINB8P50452 374 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 LIMK2P53671 638 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 OR1D5P58170 312 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 DYNLT1P63172 113 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 GPLD1P80108 840 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 GALNT3Q14435 633 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 MUM1Q2TAK8 710 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 ZDHHC20Q5W0Z9 365 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 IYDQ6PHW0 289 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 DOK6Q6PKX4 331 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 ZNF574Q6ZN55 896 aaPredicted RBP7.9□□□□□ -1.14
SCN1A-207ENST00000507401 RGS9BPQ6ZS82 235 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 BBS12Q6ZW61 710 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 PID1Q7Z2X4 250 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 LRRC34Q8IZ02 419 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 SFRP1Q8N474 314 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 AVL9Q8NBF6 648 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 GPR26Q8NDV2 337 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 OR4D9Q8NGE8 314 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 SPATA22Q8NHS9 363 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 HTR3CQ8WXA8 447 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 SH3KBP1Q96B97 665 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 FCRL3Q96P31 734 aaPredicted RBP7.9□□□□□ -1.14
SCN1A-207ENST00000507401 GBP5Q96PP8 586 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 VPS35Q96QK1 796 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 FERMT1Q9BQL6 677 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 ERP44Q9BS26 406 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 CEP41Q9BYV8 373 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 GPR63Q9BZJ6 419 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 FOXP3Q9BZS1 431 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 RUBCNLQ9H714 662 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 SYNDIG1Q9H7V2 258 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 SARS2Q9NP81 518 aaKnown RBP7.9□□□□□ -1.14
SCN1A-207ENST00000507401 HACD3Q9P035 362 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 SENP1Q9P0U3 644 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 LNPEPQ9UIQ6 1025 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 ATXN7L1Q9ULK2 861 aaPredicted RBP7.9□□□□□ -1.14
SCN1A-207ENST00000507401 WDR37Q9Y2I8 494 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 L3MBTL1Q9Y468 752 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 PLEKHM1Q9Y4G2 1056 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 DUSP10Q9Y6W6 482 aa7.9□□□□□ -1.14
SCN1A-207ENST00000507401 IGHV1OR21-1A0A087WYE8 117 aa7.89□□□□□ -1.15
SCN1A-207ENST00000507401 KIR2DS5A0A0G2JLQ3 304 aa7.89□□□□□ -1.15
SCN1A-207ENST00000507401 A0A0G2JNG1 304 aa7.89□□□□□ -1.15
SCN1A-207ENST00000507401 MIF4GDA9UHW6 222 aaKnown RBP7.89□□□□□ -1.15
SCN1A-207ENST00000507401 APOC4-APOC2K7ER74 178 aa7.89□□□□□ -1.15
SCN1A-207ENST00000507401 KIR2DS3K7RE56 304 aa7.89□□□□□ -1.15
SCN1A-207ENST00000507401 ATXN7O15265 892 aaPredicted RBP7.89□□□□□ -1.15
SCN1A-207ENST00000507401 ZSCAN9O15535 394 aaPredicted RBP7.89□□□□□ -1.15
SCN1A-207ENST00000507401 VEGFDO43915 354 aa7.89□□□□□ -1.15
SCN1A-207ENST00000507401 KCNJ13O60928 360 aa7.89□□□□□ -1.15
SCN1A-207ENST00000507401 PMPCBO75439 489 aa7.89□□□□□ -1.15
SCN1A-207ENST00000507401 GAS8O95995 478 aa7.89□□□□□ -1.15
SCN1A-207ENST00000507401 APOC2P02655 101 aa7.89□□□□□ -1.15
SCN1A-207ENST00000507401 TPBGLP0DKB5 382 aa7.89□□□□□ -1.15
SCN1A-207ENST00000507401 F3P13726 295 aa7.89□□□□□ -1.15
SCN1A-207ENST00000507401 XRCC1P18887 633 aaPredicted RBP7.89□□□□□ -1.15
SCN1A-207ENST00000507401 HLA-DPA1P20036 260 aa7.89□□□□□ -1.15
SCN1A-207ENST00000507401 CD82P27701 267 aa7.89□□□□□ -1.15
SCN1A-207ENST00000507401 SLC5A2P31639 672 aa7.89□□□□□ -1.15
SCN1A-207ENST00000507401 CD68P34810 354 aaPredicted RBP7.89□□□□□ -1.15
SCN1A-207ENST00000507401 PTPN7P35236 360 aa7.89□□□□□ -1.15
SCN1A-207ENST00000507401 CETN2P41208 172 aa7.89□□□□□ -1.15
SCN1A-207ENST00000507401 PMS2P54278 862 aa7.89□□□□□ -1.15
SCN1A-207ENST00000507401 MAZP56270 477 aaKnown RBP7.89□□□□□ -1.15
SCN1A-207ENST00000507401 WNT3AP56704 352 aa7.89□□□□□ -1.15
SCN1A-207ENST00000507401 CXADRP78310 365 aa7.89□□□□□ -1.15
SCN1A-207ENST00000507401 XIAPP98170 497 aa7.89□□□□□ -1.15
SCN1A-207ENST00000507401 RHDQ02161 417 aa7.89□□□□□ -1.15
SCN1A-207ENST00000507401 MPP3Q13368 585 aa7.89□□□□□ -1.15
SCN1A-207ENST00000507401 KIR2DS5Q14953 304 aa7.89□□□□□ -1.15
SCN1A-207ENST00000507401 PCSK7Q16549 785 aa7.89□□□□□ -1.15
SCN1A-207ENST00000507401 AMZ1Q400G9 498 aa7.89□□□□□ -1.15
SCN1A-207ENST00000507401 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.89□□□□□ -1.15
SCN1A-207ENST00000507401 TMEM164Q5U3C3 297 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms