RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 DCAKDQ8WVC6 231 aa12.54□□□□□ -0.4
TCOF1-210ENST00000506767 UBLCP1Q8WVY7 318 aaPredicted RBP12.54□□□□□ -0.4
TCOF1-210ENST00000506767 ZFPM2Q8WW38 1151 aa12.54□□□□□ -0.4
TCOF1-210ENST00000506767 TFGQ92734 400 aaPredicted RBP12.54□□□□□ -0.4
TCOF1-210ENST00000506767 NAT6Q93015 286 aa12.54□□□□□ -0.4
TCOF1-210ENST00000506767 C12orf66Q96MD2 445 aa12.54□□□□□ -0.4
TCOF1-210ENST00000506767 PAFAH2Q99487 392 aa12.54□□□□□ -0.4
TCOF1-210ENST00000506767 UCK1Q9HA47 277 aa12.54□□□□□ -0.4
TCOF1-210ENST00000506767 POPDC3Q9HBV1 291 aa12.54□□□□□ -0.4
TCOF1-210ENST00000506767 EVA1BQ9NVM1 165 aa12.54□□□□□ -0.4
TCOF1-210ENST00000506767 LRIT1Q9P2V4 623 aa12.54□□□□□ -0.4
TCOF1-210ENST00000506767 TRMT6Q9UJA5 497 aaKnown RBP12.54□□□□□ -0.4
TCOF1-210ENST00000506767 ZNF180Q9UJW8 692 aa12.54□□□□□ -0.4
TCOF1-210ENST00000506767 PRAMEF33A0A0G2JMD5 474 aa12.53□□□□□ -0.4
TCOF1-210ENST00000506767 EXOC1LA0A1B0GW35 172 aa12.53□□□□□ -0.4
TCOF1-210ENST00000506767 POC1B-GALNT4F8VUJ3 575 aa12.53□□□□□ -0.4
TCOF1-210ENST00000506767 GIPC1O14908 333 aa12.53□□□□□ -0.4
TCOF1-210ENST00000506767 KCNK5O95279 499 aa12.53□□□□□ -0.4
TCOF1-210ENST00000506767 MATN4O95460 622 aa12.53□□□□□ -0.4
TCOF1-210ENST00000506767 VIPP01282 170 aa12.53□□□□□ -0.4
TCOF1-210ENST00000506767 MPC1LP0DKB6 136 aa12.53□□□□□ -0.4
TCOF1-210ENST00000506767 ENO3P13929 434 aaPredicted RBP12.53□□□□□ -0.4
TCOF1-210ENST00000506767 MSH2P43246 934 aa12.53□□□□□ -0.4
TCOF1-210ENST00000506767 ILKQ13418 452 aa12.53□□□□□ -0.4
TCOF1-210ENST00000506767 ZKSCAN8Q15776 578 aaPredicted RBP12.53□□□□□ -0.4
TCOF1-210ENST00000506767 TTLL9Q3SXZ7 439 aa12.53□□□□□ -0.4
TCOF1-210ENST00000506767 ADGRD1Q6QNK2 874 aa12.53□□□□□ -0.4
TCOF1-210ENST00000506767 TMEM207Q6UWW9 146 aa12.53□□□□□ -0.4
TCOF1-210ENST00000506767 UNC5DQ6UXZ4 953 aa12.53□□□□□ -0.4
TCOF1-210ENST00000506767 EFL1Q7Z2Z2 1120 aaKnown RBP12.53□□□□□ -0.4
TCOF1-210ENST00000506767 RASGRP3Q8IV61 690 aa12.53□□□□□ -0.4
TCOF1-210ENST00000506767 CPNE9Q8IYJ1 553 aa12.53□□□□□ -0.4
TCOF1-210ENST00000506767 MYRIPQ8NFW9 859 aa12.53□□□□□ -0.4
TCOF1-210ENST00000506767 IFI44Q8TCB0 444 aa12.53□□□□□ -0.4
TCOF1-210ENST00000506767 CCDC74AQ96AQ1 378 aa12.53□□□□□ -0.4
TCOF1-210ENST00000506767 SH3KBP1Q96B97 665 aa12.53□□□□□ -0.4
TCOF1-210ENST00000506767 CXorf40BQ96DE9 158 aa12.53□□□□□ -0.4
TCOF1-210ENST00000506767 MRRFQ96E11 262 aaKnown RBP12.53□□□□□ -0.4
TCOF1-210ENST00000506767 CAB39LQ9H9S4 337 aa12.53□□□□□ -0.4
TCOF1-210ENST00000506767 IMP3Q9NV31 184 aaKnown RBP12.53□□□□□ -0.4
TCOF1-210ENST00000506767 SLC39A10Q9ULF5 831 aa12.53□□□□□ -0.4
TCOF1-210ENST00000506767 PCDHGA1Q9Y5H4 931 aa12.53□□□□□ -0.4
TCOF1-210ENST00000506767 HEBP2Q9Y5Z4 205 aa12.53□□□□□ -0.4
TCOF1-210ENST00000506767 CFAP20Q9Y6A4 193 aaKnown RBP12.53□□□□□ -0.4
TCOF1-210ENST00000506767 SPTBN2O15020 2390 aa12.53□□□□□ -0.4
TCOF1-210ENST00000506767 PCNX2A6NKB5 2137 aa12.53□□□□□ -0.4
TCOF1-210ENST00000506767 CPED1A4D0V7 1026 aa12.52□□□□□ -0.41
TCOF1-210ENST00000506767 CCDC151A5D8V7 595 aa12.52□□□□□ -0.41
TCOF1-210ENST00000506767 RHPN2P1A8MT19 583 aa12.52□□□□□ -0.41
TCOF1-210ENST00000506767 TCEA3O75764 348 aa12.52□□□□□ -0.41
TCOF1-210ENST00000506767 TSPAN12O95859 305 aa12.52□□□□□ -0.41
TCOF1-210ENST00000506767 SHBGP04278 402 aa12.52□□□□□ -0.41
TCOF1-210ENST00000506767 INHBAP08476 426 aa12.52□□□□□ -0.41
TCOF1-210ENST00000506767 NUDT17P0C025 328 aa12.52□□□□□ -0.41
TCOF1-210ENST00000506767 ZNF37AP17032 561 aaPredicted RBP12.52□□□□□ -0.41
TCOF1-210ENST00000506767 KCNA4P22459 653 aa12.52□□□□□ -0.41
TCOF1-210ENST00000506767 NDUFS1P28331 727 aa12.52□□□□□ -0.41
TCOF1-210ENST00000506767 GPR3P46089 330 aa12.52□□□□□ -0.41
TCOF1-210ENST00000506767 SERPINB9P50453 376 aa12.52□□□□□ -0.41
TCOF1-210ENST00000506767 NOVA1P51513 510 aaKnown RBP12.52□□□□□ -0.41
TCOF1-210ENST00000506767 ABRQ12979 859 aa12.52□□□□□ -0.41
TCOF1-210ENST00000506767 PDAP1Q13442 181 aaKnown RBP12.52□□□□□ -0.41
TCOF1-210ENST00000506767 USP10Q14694 798 aaKnown RBP12.52□□□□□ -0.41
TCOF1-210ENST00000506767 MAP9Q49MG5 647 aa12.52□□□□□ -0.41
TCOF1-210ENST00000506767 LRRC8EQ6NSJ5 796 aa12.52□□□□□ -0.41
TCOF1-210ENST00000506767 DUS1LQ6P1R4 473 aaKnown RBP12.52□□□□□ -0.41
TCOF1-210ENST00000506767 TMEM26Q6ZUK4 368 aa12.52□□□□□ -0.41
TCOF1-210ENST00000506767 SLCO6A1Q86UG4 719 aa12.52□□□□□ -0.41
TCOF1-210ENST00000506767 TRIM48Q8IWZ4 208 aa12.52□□□□□ -0.41
TCOF1-210ENST00000506767 TBC1D21Q8IYX1 336 aa12.52□□□□□ -0.41
TCOF1-210ENST00000506767 PHC3Q8NDX5 983 aa12.52□□□□□ -0.41
TCOF1-210ENST00000506767 OR5K2Q8NHB8 316 aa12.52□□□□□ -0.41
TCOF1-210ENST00000506767 EEF1AKMT1Q8WVE0 214 aa12.52□□□□□ -0.41
TCOF1-210ENST00000506767 ISL2Q96A47 359 aa12.52□□□□□ -0.41
TCOF1-210ENST00000506767 TSPAN17Q96FV3 270 aa12.52□□□□□ -0.41
TCOF1-210ENST00000506767 PDLIM5Q96HC4 596 aaKnown RBP12.52□□□□□ -0.41
TCOF1-210ENST00000506767 FERD3LQ96RJ6 166 aa12.52□□□□□ -0.41
TCOF1-210ENST00000506767 CCDC77Q9BR77 488 aa12.52□□□□□ -0.41
TCOF1-210ENST00000506767 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.52□□□□□ -0.41
TCOF1-210ENST00000506767 STN1Q9H668 368 aaKnown RBP12.52□□□□□ -0.41
TCOF1-210ENST00000506767 KIR3DX1Q9H7L2 352 aa12.52□□□□□ -0.41
TCOF1-210ENST00000506767 MVB12BQ9H7P6 319 aa12.52□□□□□ -0.41
TCOF1-210ENST00000506767 SLC24A2Q9UI40 661 aa12.52□□□□□ -0.41
TCOF1-210ENST00000506767 NFS1Q9Y697 457 aa12.52□□□□□ -0.41
TCOF1-210ENST00000506767 COLEC10Q9Y6Z7 277 aa12.52□□□□□ -0.41
TCOF1-210ENST00000506767 SPAARA0A1B0GVQ0 90 aa12.51□□□□□ -0.41
TCOF1-210ENST00000506767 LILRA5A6NI73 299 aa12.51□□□□□ -0.41
TCOF1-210ENST00000506767 GFYI3L273 518 aa12.51□□□□□ -0.41
TCOF1-210ENST00000506767 B4GAT1O43505 415 aa12.51□□□□□ -0.41
TCOF1-210ENST00000506767 PSIP1O75475 530 aaKnown RBP12.51□□□□□ -0.41
TCOF1-210ENST00000506767 TPBGLP0DKB5 382 aa12.51□□□□□ -0.41
TCOF1-210ENST00000506767 STMN1P16949 149 aa12.51□□□□□ -0.41
TCOF1-210ENST00000506767 SAT1P21673 171 aa12.51□□□□□ -0.41
TCOF1-210ENST00000506767 CNTFP26441 200 aa12.51□□□□□ -0.41
TCOF1-210ENST00000506767 RGS4P49798 205 aa12.51□□□□□ -0.41
TCOF1-210ENST00000506767 EPHA4P54764 986 aa12.51□□□□□ -0.41
TCOF1-210ENST00000506767 SLC12A2P55011 1212 aa12.51□□□□□ -0.41
TCOF1-210ENST00000506767 IL2P60568 153 aa12.51□□□□□ -0.41
TCOF1-210ENST00000506767 RAB10P61026 200 aa12.51□□□□□ -0.41
TCOF1-210ENST00000506767 SQSTM1Q13501 440 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms