RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 SLC22A15Q8IZD6 547 aa16.26■□□□□ 0.19
SNCA-209ENST00000506244 AGGF1Q8N302 714 aaeCLIP16.26■□□□□ 0.19
SNCA-209ENST00000506244 ZNF248Q8NDW4 579 aa16.26■□□□□ 0.19
SNCA-209ENST00000506244 MNS1Q8NEH6 495 aa16.26■□□□□ 0.19
SNCA-209ENST00000506244 LCN9Q8WX39 176 aa16.26■□□□□ 0.19
SNCA-209ENST00000506244 PRR11Q96HE9 360 aaPredicted RBP16.26■□□□□ 0.19
SNCA-209ENST00000506244 C9orf72Q96LT7 481 aa16.26■□□□□ 0.19
SNCA-209ENST00000506244 TGM7Q96PF1 710 aa16.26■□□□□ 0.19
SNCA-209ENST00000506244 FERD3LQ96RJ6 166 aa16.26■□□□□ 0.19
SNCA-209ENST00000506244 CD180Q99467 661 aa16.26■□□□□ 0.19
SNCA-209ENST00000506244 ZC3H7BQ9UGR2 993 aaKnown RBP16.26■□□□□ 0.19
SNCA-209ENST00000506244 KLHL3Q9UH77 587 aa16.26■□□□□ 0.19
SNCA-209ENST00000506244 POLG2Q9UHN1 485 aa16.26■□□□□ 0.19
SNCA-209ENST00000506244 RAXQ9Y2V3 346 aa16.26■□□□□ 0.19
SNCA-209ENST00000506244 SNX24Q9Y343 169 aa16.26■□□□□ 0.19
SNCA-209ENST00000506244 MRFAP1Q9Y605 127 aa16.26■□□□□ 0.19
SNCA-209ENST00000506244 COMMD10Q9Y6G5 202 aa16.26■□□□□ 0.19
SNCA-209ENST00000506244 EPG5Q9HCE0 2579 aa16.25■□□□□ 0.19
SNCA-209ENST00000506244 OR5K3A6NET4 321 aa16.25■□□□□ 0.19
SNCA-209ENST00000506244 B4E171 279 aa16.25■□□□□ 0.19
SNCA-209ENST00000506244 E5RI56 91 aa16.25■□□□□ 0.19
SNCA-209ENST00000506244 RASSF9O75901 435 aa16.25■□□□□ 0.19
SNCA-209ENST00000506244 HGFP14210 728 aa16.25■□□□□ 0.19
SNCA-209ENST00000506244 AOAHP28039 575 aa16.25■□□□□ 0.19
SNCA-209ENST00000506244 CCR7P32248 378 aa16.25■□□□□ 0.19
SNCA-209ENST00000506244 TSPAN7P41732 249 aa16.25■□□□□ 0.19
SNCA-209ENST00000506244 SLC1A2P43004 574 aa16.25■□□□□ 0.19
SNCA-209ENST00000506244 GFERP55789 205 aa16.25■□□□□ 0.19
SNCA-209ENST00000506244 RAB15P59190 212 aa16.25■□□□□ 0.19
SNCA-209ENST00000506244 CAV1Q03135 178 aa16.25■□□□□ 0.19
SNCA-209ENST00000506244 MSS51Q4VC12 460 aa16.25■□□□□ 0.19
SNCA-209ENST00000506244 CTSL3PQ5NE16 218 aa16.25■□□□□ 0.19
SNCA-209ENST00000506244 PLEKHS1Q5SXH7 462 aa16.25■□□□□ 0.19
SNCA-209ENST00000506244 C8orf74Q6P047 294 aa16.25■□□□□ 0.19
SNCA-209ENST00000506244 CYB5D1Q6P9G0 228 aa16.25■□□□□ 0.19
SNCA-209ENST00000506244 UNC5DQ6UXZ4 953 aa16.25■□□□□ 0.19
SNCA-209ENST00000506244 CENPUQ71F23 418 aa16.25■□□□□ 0.19
SNCA-209ENST00000506244 ARHGAP22Q7Z5H3 698 aa16.25■□□□□ 0.19
SNCA-209ENST00000506244 FAM129CQ86XR2 697 aa16.25■□□□□ 0.19
SNCA-209ENST00000506244 LKAAEAR1Q8TD35 194 aa16.25■□□□□ 0.19
SNCA-209ENST00000506244 BIRC8Q96P09 236 aa16.25■□□□□ 0.19
SNCA-209ENST00000506244 HGH1Q9BTY7 390 aa16.25■□□□□ 0.19
SNCA-209ENST00000506244 DPH5Q9H2P9 285 aa16.25■□□□□ 0.19
SNCA-209ENST00000506244 IL1RAPL1Q9NZN1 696 aa16.25■□□□□ 0.19
SNCA-209ENST00000506244 CHMP2BQ9UQN3 213 aa16.25■□□□□ 0.19
SNCA-209ENST00000506244 CRYL1Q9Y2S2 319 aa16.25■□□□□ 0.19
SNCA-209ENST00000506244 KIF26BQ2KJY2 2108 aa16.25■□□□□ 0.19
SNCA-209ENST00000506244 FREM2Q5SZK8 3169 aa16.25■□□□□ 0.19
SNCA-209ENST00000506244 WDFY3Q8IZQ1 3526 aa16.24■□□□□ 0.19
SNCA-209ENST00000506244 TLCD2A6NGC4 264 aa16.24■□□□□ 0.19
SNCA-209ENST00000506244 SRRM3A6NNA2 597 aaPredicted RBP16.24■□□□□ 0.19
SNCA-209ENST00000506244 IQCF5A8MTL0 148 aa16.24■□□□□ 0.19
SNCA-209ENST00000506244 NVLO15381 856 aaKnown RBP16.24■□□□□ 0.19
SNCA-209ENST00000506244 GPC4O75487 556 aa16.24■□□□□ 0.19
SNCA-209ENST00000506244 BANF1O75531 89 aa16.24■□□□□ 0.19
SNCA-209ENST00000506244 PKMP14618 531 aaKnown RBP16.24■□□□□ 0.19
SNCA-209ENST00000506244 ITIH1P19827 911 aa16.24■□□□□ 0.19
SNCA-209ENST00000506244 CD82P27701 267 aa16.24■□□□□ 0.19
SNCA-209ENST00000506244 ACADLP28330 430 aa16.24■□□□□ 0.19
SNCA-209ENST00000506244 FMO4P31512 558 aa16.24■□□□□ 0.19
SNCA-209ENST00000506244 ELK3P41970 407 aa16.24■□□□□ 0.19
SNCA-209ENST00000506244 MAPK10P53779 464 aa16.24■□□□□ 0.19
SNCA-209ENST00000506244 CSE1LP55060 971 aaKnown RBP16.24■□□□□ 0.19
SNCA-209ENST00000506244 TTLL9Q3SXZ7 439 aa16.24■□□□□ 0.19
SNCA-209ENST00000506244 HSP90AA5PQ58FG0 334 aa16.24■□□□□ 0.19
SNCA-209ENST00000506244 DNTTIP2Q5QJE6 756 aaKnown RBP16.24■□□□□ 0.19
SNCA-209ENST00000506244 LRRC69Q6ZNQ3 347 aa16.24■□□□□ 0.19
SNCA-209ENST00000506244 KIAA0408Q6ZU52 694 aa16.24■□□□□ 0.19
SNCA-209ENST00000506244 CARFQ8N187 725 aa16.24■□□□□ 0.19
SNCA-209ENST00000506244 KRT222Q8N1A0 295 aa16.24■□□□□ 0.19
SNCA-209ENST00000506244 OR52E1Q8NGJ3 308 aa16.24■□□□□ 0.19
SNCA-209ENST00000506244 OR5K2Q8NHB8 316 aa16.24■□□□□ 0.19
SNCA-209ENST00000506244 KIF18AQ8NI77 898 aa16.24■□□□□ 0.19
SNCA-209ENST00000506244 UBXN4Q92575 508 aa16.24■□□□□ 0.19
SNCA-209ENST00000506244 CERS2Q96G23 380 aa16.24■□□□□ 0.19
SNCA-209ENST00000506244 CFAP36Q96G28 342 aa16.24■□□□□ 0.19
SNCA-209ENST00000506244 TEFMQ96QE5 360 aaKnown RBP16.24■□□□□ 0.19
SNCA-209ENST00000506244 SRMSQ9H3Y6 488 aa16.24■□□□□ 0.19
SNCA-209ENST00000506244 ZNF768Q9H5H4 540 aaKnown RBP16.24■□□□□ 0.19
SNCA-209ENST00000506244 TFB2MQ9H5Q4 396 aaKnown RBP16.24■□□□□ 0.19
SNCA-209ENST00000506244 HRASLS2Q9NWW9 162 aa16.24■□□□□ 0.19
SNCA-209ENST00000506244 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.24■□□□□ 0.19
SNCA-209ENST00000506244 FBXO5Q9UKT4 447 aa16.24■□□□□ 0.19
SNCA-209ENST00000506244 TEX264Q9Y6I9 313 aa16.24■□□□□ 0.19
SNCA-209ENST00000506244 USP24Q9UPU5 2620 aa16.24■□□□□ 0.19
SNCA-209ENST00000506244 PMS2P1A4D2B8 440 aa16.23■□□□□ 0.19
SNCA-209ENST00000506244 OR6C74A6NCV1 312 aa16.23■□□□□ 0.19
SNCA-209ENST00000506244 EFCAB7A8K855 629 aa16.23■□□□□ 0.19
SNCA-209ENST00000506244 A8MU76 341 aa16.23■□□□□ 0.19
SNCA-209ENST00000506244 BHMG1C9JSJ3 638 aaPredicted RBP16.23■□□□□ 0.19
SNCA-209ENST00000506244 TLX3O43711 291 aaPredicted RBP16.23■□□□□ 0.19
SNCA-209ENST00000506244 SLCO2B1O94956 709 aa16.23■□□□□ 0.19
SNCA-209ENST00000506244 S1PR4O95977 384 aa16.23■□□□□ 0.19
SNCA-209ENST00000506244 CHRM3P20309 590 aa16.23■□□□□ 0.19
SNCA-209ENST00000506244 ATP5DP30049 168 aa16.23■□□□□ 0.19
SNCA-209ENST00000506244 SHMT2P34897 504 aa16.23■□□□□ 0.19
SNCA-209ENST00000506244 PDIA2Q13087 525 aaKnown RBP16.23■□□□□ 0.19
SNCA-209ENST00000506244 FRG1Q14331 258 aaKnown RBP16.23■□□□□ 0.19
SNCA-209ENST00000506244 STEAP4Q687X5 459 aa16.23■□□□□ 0.19
SNCA-209ENST00000506244 DUPD1Q68J44 220 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms