RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 ZNF185O15231 689 aa20.43■□□□□ 0.86
SQSTM1-210ENST00000506042 PDGFAP04085 211 aa20.43■□□□□ 0.86
SQSTM1-210ENST00000506042 UQCRFS1P47985 274 aa20.43■□□□□ 0.86
SQSTM1-210ENST00000506042 HADHBP55084 474 aaKnown RBP20.43■□□□□ 0.86
SQSTM1-210ENST00000506042 COPS2P61201 443 aa20.43■□□□□ 0.86
SQSTM1-210ENST00000506042 NCF4Q15080 339 aa20.43■□□□□ 0.86
SQSTM1-210ENST00000506042 TAZQ16635 292 aa20.43■□□□□ 0.86
SQSTM1-210ENST00000506042 PLEKHS1Q5SXH7 462 aa20.43■□□□□ 0.86
SQSTM1-210ENST00000506042 DUS1LQ6P1R4 473 aaKnown RBP20.43■□□□□ 0.86
SQSTM1-210ENST00000506042 GLIS1Q8NBF1 620 aa20.43■□□□□ 0.86
SQSTM1-210ENST00000506042 DENND1AQ8TEH3 1009 aa20.43■□□□□ 0.86
SQSTM1-210ENST00000506042 VPS50Q96JG6 964 aa20.43■□□□□ 0.86
SQSTM1-210ENST00000506042 TFB2MQ9H5Q4 396 aaKnown RBP20.43■□□□□ 0.86
SQSTM1-210ENST00000506042 NDOR1Q9UHB4 597 aa20.43■□□□□ 0.86
SQSTM1-210ENST00000506042 ARL5AQ9Y689 179 aa20.43■□□□□ 0.86
SQSTM1-210ENST00000506042 FLNCQ14315 2725 aa20.42■□□□□ 0.86
SQSTM1-210ENST00000506042 hCG_1818297A0A087WSY0 165 aa20.42■□□□□ 0.86
SQSTM1-210ENST00000506042 F5H423 210 aaPredicted RBP20.42■□□□□ 0.86
SQSTM1-210ENST00000506042 MFAP3LO75121 409 aa20.42■□□□□ 0.86
SQSTM1-210ENST00000506042 PTMAP06454 111 aaKnown RBP20.42■□□□□ 0.86
SQSTM1-210ENST00000506042 PRDX3P30048 256 aaKnown RBP20.42■□□□□ 0.86
SQSTM1-210ENST00000506042 ARCN1P48444 511 aaKnown RBP20.42■□□□□ 0.86
SQSTM1-210ENST00000506042 IRAK1BP1Q5VVH5 260 aa20.42■□□□□ 0.86
SQSTM1-210ENST00000506042 CERS6Q6ZMG9 384 aa20.42■□□□□ 0.86
SQSTM1-210ENST00000506042 AMIGO1Q86WK6 493 aa20.42■□□□□ 0.86
SQSTM1-210ENST00000506042 LURAP1LQ8IV03 231 aa20.42■□□□□ 0.86
SQSTM1-210ENST00000506042 NXPE1Q8N323 547 aa20.42■□□□□ 0.86
SQSTM1-210ENST00000506042 ADAMTS17Q8TE56 1095 aa20.42■□□□□ 0.86
SQSTM1-210ENST00000506042 RMDN2Q96LZ7 410 aa20.42■□□□□ 0.86
SQSTM1-210ENST00000506042 RUFY1Q96T51 708 aa20.42■□□□□ 0.86
SQSTM1-210ENST00000506042 CASS4Q9NQ75 786 aa20.42■□□□□ 0.86
SQSTM1-210ENST00000506042 TXLNGQ9NUQ3 528 aa20.42■□□□□ 0.86
SQSTM1-210ENST00000506042 IRAK4Q9NWZ3 460 aa20.42■□□□□ 0.86
SQSTM1-210ENST00000506042 FKBPLQ9UIM3 349 aa20.42■□□□□ 0.86
SQSTM1-210ENST00000506042 SRPK3Q9UPE1 567 aa20.42■□□□□ 0.86
SQSTM1-210ENST00000506042 BSNQ9UPA5 3926 aa20.42■□□□□ 0.86
SQSTM1-210ENST00000506042 GPR39O43194 453 aa20.41■□□□□ 0.86
SQSTM1-210ENST00000506042 IPO7O95373 1038 aaKnown RBP20.41■□□□□ 0.86
SQSTM1-210ENST00000506042 SHMT2P34897 504 aa20.41■□□□□ 0.86
SQSTM1-210ENST00000506042 RORAP35398 523 aa20.41■□□□□ 0.86
SQSTM1-210ENST00000506042 FOLR3P41439 243 aa20.41■□□□□ 0.86
SQSTM1-210ENST00000506042 SSPNQ14714 243 aa20.41■□□□□ 0.86
SQSTM1-210ENST00000506042 SPA17Q15506 151 aa20.41■□□□□ 0.86
SQSTM1-210ENST00000506042 BBS12Q6ZW61 710 aa20.41■□□□□ 0.86
SQSTM1-210ENST00000506042 TMTC1Q8IUR5 882 aa20.41■□□□□ 0.86
SQSTM1-210ENST00000506042 FDCSPQ8NFU4 85 aa20.41■□□□□ 0.86
SQSTM1-210ENST00000506042 SPDYE1Q8NFV5 336 aaPredicted RBP20.41■□□□□ 0.86
SQSTM1-210ENST00000506042 PRR7Q8TB68 274 aa20.41■□□□□ 0.86
SQSTM1-210ENST00000506042 PROKR1Q8TCW9 393 aa20.41■□□□□ 0.86
SQSTM1-210ENST00000506042 TCTN2Q96GX1 697 aa20.41■□□□□ 0.86
SQSTM1-210ENST00000506042 TTC1Q99614 292 aa20.41■□□□□ 0.86
SQSTM1-210ENST00000506042 COG4Q9H9E3 785 aa20.41■□□□□ 0.86
SQSTM1-210ENST00000506042 AKIRIN1Q9H9L7 192 aaPredicted RBP20.41■□□□□ 0.86
SQSTM1-210ENST00000506042 PCMTD2Q9NV79 361 aa20.41■□□□□ 0.86
SQSTM1-210ENST00000506042 POLG2Q9UHN1 485 aa20.41■□□□□ 0.86
SQSTM1-210ENST00000506042 ALG6Q9Y672 507 aa20.41■□□□□ 0.86
SQSTM1-210ENST00000506042 NBASA2RRP1 2371 aa20.41■□□□□ 0.86
SQSTM1-210ENST00000506042 A6NL46 340 aa20.4■□□□□ 0.86
SQSTM1-210ENST00000506042 ENO4A6NNW6 628 aa20.4■□□□□ 0.86
SQSTM1-210ENST00000506042 GAPDHSO14556 408 aaPredicted RBP20.4■□□□□ 0.86
SQSTM1-210ENST00000506042 AGTP01019 485 aa20.4■□□□□ 0.86
SQSTM1-210ENST00000506042 PLOD1Q02809 727 aaPredicted RBP20.4■□□□□ 0.86
SQSTM1-210ENST00000506042 SLC6A19Q695T7 634 aa20.4■□□□□ 0.86
SQSTM1-210ENST00000506042 SMAD5Q99717 465 aaKnown RBP20.4■□□□□ 0.86
SQSTM1-210ENST00000506042 AP1M1Q9BXS5 423 aa20.4■□□□□ 0.86
SQSTM1-210ENST00000506042 PITPNM3Q9BZ71 974 aa20.4■□□□□ 0.86
SQSTM1-210ENST00000506042 ILKAPQ9H0C8 392 aaPredicted RBP20.4■□□□□ 0.86
SQSTM1-210ENST00000506042 ZDHHC3Q9NYG2 299 aa20.4■□□□□ 0.86
SQSTM1-210ENST00000506042 EFR3BQ9Y2G0 817 aa20.4■□□□□ 0.86
SQSTM1-210ENST00000506042 HYOU1Q9Y4L1 999 aa20.4■□□□□ 0.86
SQSTM1-210ENST00000506042 ZNF749O43361 778 aa20.39■□□□□ 0.85
SQSTM1-210ENST00000506042 OR2B3O76000 313 aa20.39■□□□□ 0.85
SQSTM1-210ENST00000506042 AP2A2O94973 939 aa20.39■□□□□ 0.85
SQSTM1-210ENST00000506042 OTX2P32243 289 aa20.39■□□□□ 0.85
SQSTM1-210ENST00000506042 MAGEA1P43355 309 aa20.39■□□□□ 0.85
SQSTM1-210ENST00000506042 LAMB3Q13751 1172 aa20.39■□□□□ 0.85
SQSTM1-210ENST00000506042 ZRANB3Q5FWF4 1079 aa20.39■□□□□ 0.85
SQSTM1-210ENST00000506042 C11orf63Q6NUN7 778 aa20.39■□□□□ 0.85
SQSTM1-210ENST00000506042 RANBP10Q6VN20 620 aa20.39■□□□□ 0.85
SQSTM1-210ENST00000506042 ZADH2Q8N4Q0 377 aa20.39■□□□□ 0.85
SQSTM1-210ENST00000506042 SLC38A9Q8NBW4 561 aa20.39■□□□□ 0.85
SQSTM1-210ENST00000506042 OR1L3Q8NH93 324 aa20.39■□□□□ 0.85
SQSTM1-210ENST00000506042 COG1Q8WTW3 980 aa20.39■□□□□ 0.85
SQSTM1-210ENST00000506042 TFGQ92734 400 aaPredicted RBP20.39■□□□□ 0.85
SQSTM1-210ENST00000506042 CHP1Q99653 195 aa20.39■□□□□ 0.85
SQSTM1-210ENST00000506042 MFRPQ9BY79 579 aa20.39■□□□□ 0.85
SQSTM1-210ENST00000506042 AGPAT4Q9NRZ5 378 aa20.39■□□□□ 0.85
SQSTM1-210ENST00000506042 IFT80Q9P2H3 777 aaPredicted RBP20.39■□□□□ 0.85
SQSTM1-210ENST00000506042 B3GNT3Q9Y2A9 372 aa20.39■□□□□ 0.85
SQSTM1-210ENST00000506042 TNRC6AQ8NDV7 1962 aaKnown RBP20.39■□□□□ 0.85
SQSTM1-210ENST00000506042 COL12A1Q99715 3063 aa20.38■□□□□ 0.85
SQSTM1-210ENST00000506042 AGAP14A8MT82 685 aa20.38■□□□□ 0.85
SQSTM1-210ENST00000506042 AKR1B15C9JRZ8 316 aaPredicted RBP20.38■□□□□ 0.85
SQSTM1-210ENST00000506042 BTN3A1O00481 513 aa20.38■□□□□ 0.85
SQSTM1-210ENST00000506042 LIN7AO14910 233 aaPredicted RBP20.38■□□□□ 0.85
SQSTM1-210ENST00000506042 GAS8O95995 478 aa20.38■□□□□ 0.85
SQSTM1-210ENST00000506042 FTH1P02794 183 aa20.38■□□□□ 0.85
SQSTM1-210ENST00000506042 PIM1P11309 404 aaPredicted RBP20.38■□□□□ 0.85
SQSTM1-210ENST00000506042 RBL1P28749 1068 aa20.38■□□□□ 0.85
SQSTM1-210ENST00000506042 LMAN1P49257 510 aa20.38■□□□□ 0.85
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