RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 TPBGLP0DKB5 382 aa10.16□□□□□ -0.78
TPM3-217ENST00000504663 EPORP19235 508 aa10.16□□□□□ -0.78
TPM3-217ENST00000504663 IMPDH1P20839 514 aa10.16□□□□□ -0.78
TPM3-217ENST00000504663 MPSTP25325 297 aa10.16□□□□□ -0.78
TPM3-217ENST00000504663 HOXA6P31267 233 aa10.16□□□□□ -0.78
TPM3-217ENST00000504663 MAGEA9P43362 315 aa10.16□□□□□ -0.78
TPM3-217ENST00000504663 BDKRB1P46663 353 aa10.16□□□□□ -0.78
TPM3-217ENST00000504663 SLC6A12P48065 614 aa10.16□□□□□ -0.78
TPM3-217ENST00000504663 HERVK_113P63132 956 aa10.16□□□□□ -0.78
TPM3-217ENST00000504663 CDKL1Q00532 357 aa10.16□□□□□ -0.78
TPM3-217ENST00000504663 GTF2H3Q13889 308 aa10.16□□□□□ -0.78
TPM3-217ENST00000504663 PCBP2Q15366 365 aaKnown RBP eCLIP10.16□□□□□ -0.78
TPM3-217ENST00000504663 ARL13AQ5H913 290 aaPredicted RBP10.16□□□□□ -0.78
TPM3-217ENST00000504663 ATG16L1Q676U5 607 aa10.16□□□□□ -0.78
TPM3-217ENST00000504663 GPSM1Q86YR5 675 aa10.16□□□□□ -0.78
TPM3-217ENST00000504663 SLC22A9Q8IVM8 553 aa10.16□□□□□ -0.78
TPM3-217ENST00000504663 KLHDC8AQ8IYD2 350 aa10.16□□□□□ -0.78
TPM3-217ENST00000504663 PGBD3Q8N328 593 aa10.16□□□□□ -0.78
TPM3-217ENST00000504663 ZNF781Q8N8C0 355 aa10.16□□□□□ -0.78
TPM3-217ENST00000504663 FBXO15Q8NCQ5 510 aaPredicted RBP10.16□□□□□ -0.78
TPM3-217ENST00000504663 OR13H1Q8NG92 308 aa10.16□□□□□ -0.78
TPM3-217ENST00000504663 ASZ1Q8WWH4 475 aa10.16□□□□□ -0.78
TPM3-217ENST00000504663 RHBDF1Q96CC6 855 aa10.16□□□□□ -0.78
TPM3-217ENST00000504663 PHF21BQ96EK2 531 aa10.16□□□□□ -0.78
TPM3-217ENST00000504663 SLC6A18Q96N87 628 aa10.16□□□□□ -0.78
TPM3-217ENST00000504663 ERVK-6Q9BXR3 956 aa10.16□□□□□ -0.78
TPM3-217ENST00000504663 FAM107BQ9H098 131 aa10.16□□□□□ -0.78
TPM3-217ENST00000504663 RMI1Q9H9A7 625 aa10.16□□□□□ -0.78
TPM3-217ENST00000504663 PNPOQ9NVS9 261 aa10.16□□□□□ -0.78
TPM3-217ENST00000504663 FAM8A1Q9UBU6 413 aa10.16□□□□□ -0.78
TPM3-217ENST00000504663 SUFUQ9UMX1 484 aa10.16□□□□□ -0.78
TPM3-217ENST00000504663 DMTF1Q9Y222 760 aa10.16□□□□□ -0.78
TPM3-217ENST00000504663 DNAJC16Q9Y2G8 782 aa10.16□□□□□ -0.78
TPM3-217ENST00000504663 DNMT3AQ9Y6K1 912 aaPredicted RBP10.16□□□□□ -0.78
TPM3-217ENST00000504663 ABCA7Q8IZY2 2146 aa10.15□□□□□ -0.78
TPM3-217ENST00000504663 PRSS38A1L453 326 aa10.15□□□□□ -0.78
TPM3-217ENST00000504663 NCF1BA6NI72 391 aaPredicted RBP10.15□□□□□ -0.78
TPM3-217ENST00000504663 SYCE1LA8MT33 242 aa10.15□□□□□ -0.78
TPM3-217ENST00000504663 METTL12A8MUP2 240 aa10.15□□□□□ -0.78
TPM3-217ENST00000504663 NCF1CA8MVU1 366 aaPredicted RBP10.15□□□□□ -0.78
TPM3-217ENST00000504663 TMEM233B4DJY2 109 aa10.15□□□□□ -0.78
TPM3-217ENST00000504663 SUPT3HB4E1H0 165 aa10.15□□□□□ -0.78
TPM3-217ENST00000504663 E2F3O00716 465 aa10.15□□□□□ -0.78
TPM3-217ENST00000504663 FPGTO14772 594 aa10.15□□□□□ -0.78
TPM3-217ENST00000504663 KPNA5O15131 536 aa10.15□□□□□ -0.78
TPM3-217ENST00000504663 KMOO15229 486 aa10.15□□□□□ -0.78
TPM3-217ENST00000504663 SMIM24O75264 130 aa10.15□□□□□ -0.78
TPM3-217ENST00000504663 SUPT3HO75486 399 aa10.15□□□□□ -0.78
TPM3-217ENST00000504663 FSBPO95073 299 aa10.15□□□□□ -0.78
TPM3-217ENST00000504663 JUNP05412 331 aaKnown RBP10.15□□□□□ -0.78
TPM3-217ENST00000504663 C8GP07360 202 aa10.15□□□□□ -0.78
TPM3-217ENST00000504663 ENO2P09104 434 aaPredicted RBP10.15□□□□□ -0.78
TPM3-217ENST00000504663 NCF1P14598 390 aaPredicted RBP10.15□□□□□ -0.78
TPM3-217ENST00000504663 EEF1DP29692 281 aaKnown RBP10.15□□□□□ -0.78
TPM3-217ENST00000504663 SERPINB5P36952 375 aa10.15□□□□□ -0.78
TPM3-217ENST00000504663 CXCL12P48061 93 aa10.15□□□□□ -0.78
TPM3-217ENST00000504663 CCR3P51677 355 aa10.15□□□□□ -0.78
TPM3-217ENST00000504663 ALDH18A1P54886 795 aaKnown RBP10.15□□□□□ -0.78
TPM3-217ENST00000504663 GALNT1Q10472 559 aaPredicted RBP10.15□□□□□ -0.78
TPM3-217ENST00000504663 SF3A3Q12874 501 aaKnown RBP eCLIP10.15□□□□□ -0.78
TPM3-217ENST00000504663 TUBB3Q13509 450 aa10.15□□□□□ -0.78
TPM3-217ENST00000504663 PFKFB4Q16877 469 aa10.15□□□□□ -0.78
TPM3-217ENST00000504663 ALG11Q2TAA5 492 aa10.15□□□□□ -0.78
TPM3-217ENST00000504663 CDKL4Q5MAI5 379 aa10.15□□□□□ -0.78
TPM3-217ENST00000504663 METRNLQ641Q3 311 aa10.15□□□□□ -0.78
TPM3-217ENST00000504663 UBE2R2Q712K3 238 aaPredicted RBP10.15□□□□□ -0.78
TPM3-217ENST00000504663 SPATA21Q7Z572 469 aa10.15□□□□□ -0.78
TPM3-217ENST00000504663 PDZD3Q86UT5 571 aa10.15□□□□□ -0.78
TPM3-217ENST00000504663 NRROSQ86YC3 692 aa10.15□□□□□ -0.78
TPM3-217ENST00000504663 FBXO39Q8N4B4 442 aa10.15□□□□□ -0.78
TPM3-217ENST00000504663 MAPK15Q8TD08 544 aa10.15□□□□□ -0.78
TPM3-217ENST00000504663 ESAMQ96AP7 390 aa10.15□□□□□ -0.78
TPM3-217ENST00000504663 CCDC126Q96EE4 140 aa10.15□□□□□ -0.78
TPM3-217ENST00000504663 THOC1Q96FV9 657 aaKnown RBP10.15□□□□□ -0.78
TPM3-217ENST00000504663 SEC16BQ96JE7 1060 aa10.15□□□□□ -0.78
TPM3-217ENST00000504663 UHRF1Q96T88 793 aaPredicted RBP10.15□□□□□ -0.78
TPM3-217ENST00000504663 ELAC2Q9BQ52 826 aaKnown RBP10.15□□□□□ -0.78
TPM3-217ENST00000504663 MENTQ9BUN1 341 aa10.15□□□□□ -0.78
TPM3-217ENST00000504663 PCED1AQ9H1Q7 454 aa10.15□□□□□ -0.78
TPM3-217ENST00000504663 UTP6Q9NYH9 597 aaKnown RBP10.15□□□□□ -0.78
TPM3-217ENST00000504663 KLHL14Q9P2G3 628 aa10.15□□□□□ -0.78
TPM3-217ENST00000504663 EIF2B4Q9UI10 523 aaKnown RBP10.15□□□□□ -0.78
TPM3-217ENST00000504663 KLF15Q9UIH9 416 aa10.15□□□□□ -0.78
TPM3-217ENST00000504663 ZDHHC2Q9UIJ5 367 aa10.15□□□□□ -0.78
TPM3-217ENST00000504663 TMCO1Q9UM00 188 aa10.15□□□□□ -0.78
TPM3-217ENST00000504663 INVSQ9Y283 1065 aa10.15□□□□□ -0.78
TPM3-217ENST00000504663 WDR37Q9Y2I8 494 aa10.15□□□□□ -0.78
TPM3-217ENST00000504663 A6NCN8 305 aa10.14□□□□□ -0.79
TPM3-217ENST00000504663 PRAMEF26H0Y7S4 382 aa10.14□□□□□ -0.79
TPM3-217ENST00000504663 CACNB4O00305 520 aaPredicted RBP10.14□□□□□ -0.79
TPM3-217ENST00000504663 NDUFAB1O14561 156 aa10.14□□□□□ -0.79
TPM3-217ENST00000504663 OR7A17O14581 309 aa10.14□□□□□ -0.79
TPM3-217ENST00000504663 TOR1BO14657 336 aa10.14□□□□□ -0.79
TPM3-217ENST00000504663 TNFRSF10CO14798 259 aa10.14□□□□□ -0.79
TPM3-217ENST00000504663 AXIN1O15169 862 aa10.14□□□□□ -0.79
TPM3-217ENST00000504663 DCXO43602 365 aa10.14□□□□□ -0.79
TPM3-217ENST00000504663 PRAMEF4O60810 478 aa10.14□□□□□ -0.79
TPM3-217ENST00000504663 C1orf105O95561 183 aa10.14□□□□□ -0.79
TPM3-217ENST00000504663 EML2O95834 649 aa10.14□□□□□ -0.79
TPM3-217ENST00000504663 ACP5P13686 325 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms