RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 MMP11P24347 488 aa15.29■□□□□ 0.04
PDLIM7-210ENST00000503827 FOXL2P58012 376 aa15.29■□□□□ 0.04
PDLIM7-210ENST00000503827 PCSK7Q16549 785 aa15.29■□□□□ 0.04
PDLIM7-210ENST00000503827 NKAIN1Q4KMZ8 207 aa15.29■□□□□ 0.04
PDLIM7-210ENST00000503827 CT47A1Q5JQC4 288 aaPredicted RBP15.29■□□□□ 0.04
PDLIM7-210ENST00000503827 FNBP1LQ5T0N5 605 aa15.29■□□□□ 0.04
PDLIM7-210ENST00000503827 ISLR2Q6UXK2 745 aa15.29■□□□□ 0.04
PDLIM7-210ENST00000503827 IRF2BP2Q7Z5L9 587 aa15.29■□□□□ 0.04
PDLIM7-210ENST00000503827 CATSPER1Q8NEC5 780 aa15.29■□□□□ 0.04
PDLIM7-210ENST00000503827 OR1N1Q8NGS0 311 aa15.29■□□□□ 0.04
PDLIM7-210ENST00000503827 TRIM11Q96F44 468 aa15.29■□□□□ 0.04
PDLIM7-210ENST00000503827 C14orf79Q96F83 325 aa15.29■□□□□ 0.04
PDLIM7-210ENST00000503827 TRIM56Q9BRZ2 755 aaKnown RBP15.29■□□□□ 0.04
PDLIM7-210ENST00000503827 CBX8Q9HC52 389 aa15.29■□□□□ 0.04
PDLIM7-210ENST00000503827 KLHL33A6NCF5 533 aa15.28■□□□□ 0.04
PDLIM7-210ENST00000503827 KCNK1O00180 336 aa15.28■□□□□ 0.04
PDLIM7-210ENST00000503827 AURKAO14965 403 aa15.28■□□□□ 0.04
PDLIM7-210ENST00000503827 NADKO95544 446 aaPredicted RBP15.28■□□□□ 0.04
PDLIM7-210ENST00000503827 CD48P09326 243 aa15.28■□□□□ 0.04
PDLIM7-210ENST00000503827 GZMAP12544 262 aa15.28■□□□□ 0.04
PDLIM7-210ENST00000503827 PVRP15151 417 aa15.28■□□□□ 0.04
PDLIM7-210ENST00000503827 PBX1P40424 430 aa15.28■□□□□ 0.04
PDLIM7-210ENST00000503827 CA7P43166 264 aa15.28■□□□□ 0.04
PDLIM7-210ENST00000503827 SLC25A11Q02978 314 aaKnown RBP15.28■□□□□ 0.04
PDLIM7-210ENST00000503827 PPP2R5EQ16537 467 aa15.28■□□□□ 0.04
PDLIM7-210ENST00000503827 LONRF2Q1L5Z9 754 aa15.28■□□□□ 0.04
PDLIM7-210ENST00000503827 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.28■□□□□ 0.04
PDLIM7-210ENST00000503827 CDKAL1Q5VV42 579 aa15.28■□□□□ 0.04
PDLIM7-210ENST00000503827 ZDHHC20Q5W0Z9 365 aa15.28■□□□□ 0.04
PDLIM7-210ENST00000503827 LINC00696Q6ZRV3 163 aa15.28■□□□□ 0.04
PDLIM7-210ENST00000503827 HOOK3Q86VS8 718 aa15.28■□□□□ 0.04
PDLIM7-210ENST00000503827 CNTD1Q8N815 330 aa15.28■□□□□ 0.04
PDLIM7-210ENST00000503827 DDHD1Q8NEL9 900 aa15.28■□□□□ 0.04
PDLIM7-210ENST00000503827 OR2L2Q8NH16 312 aa15.28■□□□□ 0.04
PDLIM7-210ENST00000503827 FAM71BQ8TC56 605 aa15.28■□□□□ 0.04
PDLIM7-210ENST00000503827 DTX3LQ8TDB6 740 aa15.28■□□□□ 0.04
PDLIM7-210ENST00000503827 CHTF18Q8WVB6 975 aa15.28■□□□□ 0.04
PDLIM7-210ENST00000503827 LMF1Q96S06 567 aa15.28■□□□□ 0.04
PDLIM7-210ENST00000503827 IL26Q9NPH9 171 aa15.28■□□□□ 0.04
PDLIM7-210ENST00000503827 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.28■□□□□ 0.04
PDLIM7-210ENST00000503827 DHCR7Q9UBM7 475 aaKnown RBP15.28■□□□□ 0.04
PDLIM7-210ENST00000503827 CDC23Q9UJX2 597 aa15.28■□□□□ 0.04
PDLIM7-210ENST00000503827 A0A1B0GTL3 188 aa15.27■□□□□ 0.04
PDLIM7-210ENST00000503827 C2orf74A8MZ97 194 aa15.27■□□□□ 0.04
PDLIM7-210ENST00000503827 BTN3A3O00478 584 aa15.27■□□□□ 0.04
PDLIM7-210ENST00000503827 BTN3A1O00481 513 aa15.27■□□□□ 0.04
PDLIM7-210ENST00000503827 UGT1A9O60656 530 aa15.27■□□□□ 0.04
PDLIM7-210ENST00000503827 UNC5CO95185 931 aa15.27■□□□□ 0.04
PDLIM7-210ENST00000503827 MT-CYBP00156 380 aaPredicted RBP15.27■□□□□ 0.04
PDLIM7-210ENST00000503827 MYBL1P10243 752 aa15.27■□□□□ 0.04
PDLIM7-210ENST00000503827 PYGMP11217 842 aa15.27■□□□□ 0.04
PDLIM7-210ENST00000503827 HOXB4P17483 251 aaPredicted RBP15.27■□□□□ 0.04
PDLIM7-210ENST00000503827 UGT1A6P19224 532 aa15.27■□□□□ 0.04
PDLIM7-210ENST00000503827 UGT1A1P22309 533 aa15.27■□□□□ 0.04
PDLIM7-210ENST00000503827 UGT1A4P22310 534 aa15.27■□□□□ 0.04
PDLIM7-210ENST00000503827 HMGCLP35914 325 aa15.27■□□□□ 0.04
PDLIM7-210ENST00000503827 SPAM1P38567 509 aa15.27■□□□□ 0.04
PDLIM7-210ENST00000503827 MFAP5Q13361 173 aa15.27■□□□□ 0.04
PDLIM7-210ENST00000503827 ITGA9Q13797 1035 aa15.27■□□□□ 0.04
PDLIM7-210ENST00000503827 INAQ16352 499 aa15.27■□□□□ 0.04
PDLIM7-210ENST00000503827 NT5DC3Q86UY8 548 aa15.27■□□□□ 0.04
PDLIM7-210ENST00000503827 CEP97Q8IW35 865 aa15.27■□□□□ 0.04
PDLIM7-210ENST00000503827 TMEM151BQ8IW70 566 aa15.27■□□□□ 0.04
PDLIM7-210ENST00000503827 ENOX1Q8TC92 643 aaKnown RBP15.27■□□□□ 0.04
PDLIM7-210ENST00000503827 IMP4Q96G21 291 aaKnown RBP15.27■□□□□ 0.04
PDLIM7-210ENST00000503827 THOC3Q96J01 351 aaKnown RBP15.27■□□□□ 0.04
PDLIM7-210ENST00000503827 VPS50Q96JG6 964 aa15.27■□□□□ 0.04
PDLIM7-210ENST00000503827 RMDN2Q96LZ7 410 aa15.27■□□□□ 0.04
PDLIM7-210ENST00000503827 SPRTNQ9H040 489 aaPredicted RBP15.27■□□□□ 0.04
PDLIM7-210ENST00000503827 DEF6Q9H4E7 631 aa15.27■□□□□ 0.04
PDLIM7-210ENST00000503827 UGT1A7Q9HAW7 530 aa15.27■□□□□ 0.04
PDLIM7-210ENST00000503827 UGT1A10Q9HAW8 530 aa15.27■□□□□ 0.04
PDLIM7-210ENST00000503827 UGT1A8Q9HAW9 530 aa15.27■□□□□ 0.04
PDLIM7-210ENST00000503827 FAM8A1Q9UBU6 413 aa15.27■□□□□ 0.04
PDLIM7-210ENST00000503827 SH3BGRL2Q9UJC5 107 aa15.27■□□□□ 0.04
PDLIM7-210ENST00000503827 SPO11Q9Y5K1 396 aa15.27■□□□□ 0.04
PDLIM7-210ENST00000503827 NCOA6Q14686 2063 aaPredicted RBP15.27■□□□□ 0.03
PDLIM7-210ENST00000503827 CACNA1CQ13936 2221 aa15.27■□□□□ 0.03
PDLIM7-210ENST00000503827 H3BMH7 237 aa15.26■□□□□ 0.03
PDLIM7-210ENST00000503827 ZSCAN9O15535 394 aaPredicted RBP15.26■□□□□ 0.03
PDLIM7-210ENST00000503827 NDST3O95803 873 aa15.26■□□□□ 0.03
PDLIM7-210ENST00000503827 POLBP06746 335 aa15.26■□□□□ 0.03
PDLIM7-210ENST00000503827 MSH3P20585 1137 aa15.26■□□□□ 0.03
PDLIM7-210ENST00000503827 AGAP20933 346 aa15.26■□□□□ 0.03
PDLIM7-210ENST00000503827 AKT1P31749 480 aa15.26■□□□□ 0.03
PDLIM7-210ENST00000503827 SSR1P43307 286 aaKnown RBP15.26■□□□□ 0.03
PDLIM7-210ENST00000503827 SMSP52788 366 aa15.26■□□□□ 0.03
PDLIM7-210ENST00000503827 CASP6P55212 293 aa15.26■□□□□ 0.03
PDLIM7-210ENST00000503827 UBE2HP62256 183 aa15.26■□□□□ 0.03
PDLIM7-210ENST00000503827 ARG2P78540 354 aa15.26■□□□□ 0.03
PDLIM7-210ENST00000503827 IFI35P80217 286 aaPredicted RBP15.26■□□□□ 0.03
PDLIM7-210ENST00000503827 UBXN1Q04323 297 aa15.26■□□□□ 0.03
PDLIM7-210ENST00000503827 GBE1Q04446 702 aa15.26■□□□□ 0.03
PDLIM7-210ENST00000503827 TLE4Q04727 773 aa15.26■□□□□ 0.03
PDLIM7-210ENST00000503827 RBPJQ06330 500 aa15.26■□□□□ 0.03
PDLIM7-210ENST00000503827 ZBTB17Q13105 803 aa15.26■□□□□ 0.03
PDLIM7-210ENST00000503827 DPYSL3Q14195 570 aa15.26■□□□□ 0.03
PDLIM7-210ENST00000503827 TUBB8Q3ZCM7 444 aa15.26■□□□□ 0.03
PDLIM7-210ENST00000503827 GPRC6AQ5T6X5 926 aa15.26■□□□□ 0.03
PDLIM7-210ENST00000503827 FAM151BQ6UXP7 276 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms