RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 FRG1Q14331 258 aaKnown RBP17.76■□□□□ 0.43
PDLIM7-209ENST00000503346 PLCL1Q15111 1095 aa17.76■□□□□ 0.43
PDLIM7-209ENST00000503346 TMED2Q15363 201 aa17.76■□□□□ 0.43
PDLIM7-209ENST00000503346 TBC1D25Q3MII6 688 aa17.76■□□□□ 0.43
PDLIM7-209ENST00000503346 HP1BP3Q5SSJ5 553 aaPredicted RBP17.76■□□□□ 0.43
PDLIM7-209ENST00000503346 KLHL35Q6PF15 583 aa17.76■□□□□ 0.43
PDLIM7-209ENST00000503346 ARHGAP22Q7Z5H3 698 aa17.76■□□□□ 0.43
PDLIM7-209ENST00000503346 CNTN4Q8IWV2 1026 aa17.76■□□□□ 0.43
PDLIM7-209ENST00000503346 RCBTB1Q8NDN9 531 aa17.76■□□□□ 0.43
PDLIM7-209ENST00000503346 GABPB2Q8TAK5 448 aaPredicted RBP17.76■□□□□ 0.43
PDLIM7-209ENST00000503346 CERS2Q96G23 380 aa17.76■□□□□ 0.43
PDLIM7-209ENST00000503346 ASCL3Q9NQ33 180 aa17.76■□□□□ 0.43
PDLIM7-209ENST00000503346 FBXO6Q9NRD1 293 aaPredicted RBP17.76■□□□□ 0.43
PDLIM7-209ENST00000503346 IARS2Q9NSE4 1012 aaKnown RBP17.76■□□□□ 0.43
PDLIM7-209ENST00000503346 FBXO5Q9UKT4 447 aa17.76■□□□□ 0.43
PDLIM7-209ENST00000503346 FREM2Q5SZK8 3169 aa17.76■□□□□ 0.43
PDLIM7-209ENST00000503346 TPRP12270 2363 aaKnown RBP17.75■□□□□ 0.43
PDLIM7-209ENST00000503346 TAF4O00268 1085 aa17.75■□□□□ 0.43
PDLIM7-209ENST00000503346 CAPN5O15484 640 aaPredicted RBP17.75■□□□□ 0.43
PDLIM7-209ENST00000503346 ITGA2BP08514 1039 aa17.75■□□□□ 0.43
PDLIM7-209ENST00000503346 ANKRD34CP0C6C1 535 aa17.75■□□□□ 0.43
PDLIM7-209ENST00000503346 JMJD7P0C870 316 aa17.75■□□□□ 0.43
PDLIM7-209ENST00000503346 ERVK-10P10266 1014 aa17.75■□□□□ 0.43
PDLIM7-209ENST00000503346 HGFP14210 728 aa17.75■□□□□ 0.43
PDLIM7-209ENST00000503346 RBMS1P29558 406 aaKnown RBP17.75■□□□□ 0.43
PDLIM7-209ENST00000503346 GFERP55789 205 aa17.75■□□□□ 0.43
PDLIM7-209ENST00000503346 ERVPABLB-1P60509 514 aa17.75■□□□□ 0.43
PDLIM7-209ENST00000503346 CAV1Q03135 178 aa17.75■□□□□ 0.43
PDLIM7-209ENST00000503346 PLEKHS1Q5SXH7 462 aa17.75■□□□□ 0.43
PDLIM7-209ENST00000503346 C8orf74Q6P047 294 aa17.75■□□□□ 0.43
PDLIM7-209ENST00000503346 OTOAQ7RTW8 1153 aa17.75■□□□□ 0.43
PDLIM7-209ENST00000503346 VRK3Q8IV63 474 aa17.75■□□□□ 0.43
PDLIM7-209ENST00000503346 MMGT1Q8N4V1 131 aa17.75■□□□□ 0.43
PDLIM7-209ENST00000503346 C2CD4AQ8NCU7 369 aaPredicted RBP17.75■□□□□ 0.43
PDLIM7-209ENST00000503346 AGBL5Q8NDL9 886 aa17.75■□□□□ 0.43
PDLIM7-209ENST00000503346 PHC3Q8NDX5 983 aa17.75■□□□□ 0.43
PDLIM7-209ENST00000503346 MNS1Q8NEH6 495 aa17.75■□□□□ 0.43
PDLIM7-209ENST00000503346 JPH3Q8WXH2 748 aaPredicted RBP17.75■□□□□ 0.43
PDLIM7-209ENST00000503346 ART4Q93070 314 aa17.75■□□□□ 0.43
PDLIM7-209ENST00000503346 CFAP36Q96G28 342 aa17.75■□□□□ 0.43
PDLIM7-209ENST00000503346 ZDHHC12Q96GR4 267 aa17.75■□□□□ 0.43
PDLIM7-209ENST00000503346 C9orf72Q96LT7 481 aa17.75■□□□□ 0.43
PDLIM7-209ENST00000503346 ZNF578Q96N58 590 aaPredicted RBP17.75■□□□□ 0.43
PDLIM7-209ENST00000503346 TFB2MQ9H5Q4 396 aaKnown RBP17.75■□□□□ 0.43
PDLIM7-209ENST00000503346 LATS2Q9NRM7 1088 aa17.75■□□□□ 0.43
PDLIM7-209ENST00000503346 ZMIZ1Q9ULJ6 1067 aa17.75■□□□□ 0.43
PDLIM7-209ENST00000503346 ASF1AQ9Y294 204 aa17.75■□□□□ 0.43
PDLIM7-209ENST00000503346 UNC13CQ8NB66 2214 aa17.74■□□□□ 0.43
PDLIM7-209ENST00000503346 OR5K3A6NET4 321 aa17.74■□□□□ 0.43
PDLIM7-209ENST00000503346 CDRT15L2A8MXV6 281 aa17.74■□□□□ 0.43
PDLIM7-209ENST00000503346 EIF3HO15372 352 aaKnown RBP eCLIP17.74■□□□□ 0.43
PDLIM7-209ENST00000503346 TOX3O15405 576 aaPredicted RBP17.74■□□□□ 0.43
PDLIM7-209ENST00000503346 NIPSNAP2O75323 286 aa17.74■□□□□ 0.43
PDLIM7-209ENST00000503346 TNFSF15O95150 251 aa17.74■□□□□ 0.43
PDLIM7-209ENST00000503346 CSTF2P33240 577 aaKnown RBP eCLIP17.74■□□□□ 0.43
PDLIM7-209ENST00000503346 LEPRP48357 1165 aaKnown RBP17.74■□□□□ 0.43
PDLIM7-209ENST00000503346 CSE1LP55060 971 aaKnown RBP17.74■□□□□ 0.43
PDLIM7-209ENST00000503346 MPP1Q00013 466 aa17.74■□□□□ 0.43
PDLIM7-209ENST00000503346 FASTKD3Q14CZ7 662 aaKnown RBP17.74■□□□□ 0.43
PDLIM7-209ENST00000503346 FOXR1Q6PIV2 292 aa17.74■□□□□ 0.43
PDLIM7-209ENST00000503346 KIAA0408Q6ZU52 694 aa17.74■□□□□ 0.43
PDLIM7-209ENST00000503346 CLEC14AQ86T13 490 aa17.74■□□□□ 0.43
PDLIM7-209ENST00000503346 OOSP2Q86WS3 158 aa17.74■□□□□ 0.43
PDLIM7-209ENST00000503346 ANKMY2Q8IV38 441 aa17.74■□□□□ 0.43
PDLIM7-209ENST00000503346 TBC1D21Q8IYX1 336 aa17.74■□□□□ 0.43
PDLIM7-209ENST00000503346 FBXO36Q8NEA4 188 aa17.74■□□□□ 0.43
PDLIM7-209ENST00000503346 OR5K2Q8NHB8 316 aa17.74■□□□□ 0.43
PDLIM7-209ENST00000503346 TGM7Q96PF1 710 aa17.74■□□□□ 0.43
PDLIM7-209ENST00000503346 LRRC1Q9BTT6 524 aa17.74■□□□□ 0.43
PDLIM7-209ENST00000503346 PHACTR1Q9C0D0 580 aa17.74■□□□□ 0.43
PDLIM7-209ENST00000503346 TRIT1Q9H3H1 467 aaKnown RBP17.74■□□□□ 0.43
PDLIM7-209ENST00000503346 THSD1Q9NS62 852 aa17.74■□□□□ 0.43
PDLIM7-209ENST00000503346 COMMD10Q9Y6G5 202 aa17.74■□□□□ 0.43
PDLIM7-209ENST00000503346 CTAGE15A4D2H0 777 aa17.73■□□□□ 0.43
PDLIM7-209ENST00000503346 F7P08709 466 aaPredicted RBP17.73■□□□□ 0.43
PDLIM7-209ENST00000503346 CTAGE8P0CG41 777 aa17.73■□□□□ 0.43
PDLIM7-209ENST00000503346 CHRM3P20309 590 aa17.73■□□□□ 0.43
PDLIM7-209ENST00000503346 GBX1Q14549 363 aa17.73■□□□□ 0.43
PDLIM7-209ENST00000503346 ST3GAL2Q16842 350 aa17.73■□□□□ 0.43
PDLIM7-209ENST00000503346 SNAP47Q5SQN1 464 aa17.73■□□□□ 0.43
PDLIM7-209ENST00000503346 ZNF549Q6P9A3 640 aa17.73■□□□□ 0.43
PDLIM7-209ENST00000503346 TRMT10BQ6PF06 316 aaKnown RBP17.73■□□□□ 0.43
PDLIM7-209ENST00000503346 ZDHHC24Q6UX98 284 aa17.73■□□□□ 0.43
PDLIM7-209ENST00000503346 PRSS42Q7Z5A4 293 aa17.73■□□□□ 0.43
PDLIM7-209ENST00000503346 GALNT7Q86SF2 657 aa17.73■□□□□ 0.43
PDLIM7-209ENST00000503346 CTAGE6Q86UF2 777 aa17.73■□□□□ 0.43
PDLIM7-209ENST00000503346 CTAGE4Q8IX94 777 aa17.73■□□□□ 0.43
PDLIM7-209ENST00000503346 ZBED8Q8IZ13 594 aa17.73■□□□□ 0.43
PDLIM7-209ENST00000503346 OR52E1Q8NGJ3 308 aa17.73■□□□□ 0.43
PDLIM7-209ENST00000503346 OR5AR1Q8NGP9 310 aa17.73■□□□□ 0.43
PDLIM7-209ENST00000503346 SNIP1Q8TAD8 396 aaKnown RBP17.73■□□□□ 0.43
PDLIM7-209ENST00000503346 LCN9Q8WX39 176 aa17.73■□□□□ 0.43
PDLIM7-209ENST00000503346 SEC14L1Q92503 715 aa17.73■□□□□ 0.43
PDLIM7-209ENST00000503346 KCNJ9Q92806 393 aa17.73■□□□□ 0.43
PDLIM7-209ENST00000503346 FGF11Q92914 225 aa17.73■□□□□ 0.43
PDLIM7-209ENST00000503346 HGH1Q9BTY7 390 aa17.73■□□□□ 0.43
PDLIM7-209ENST00000503346 CCDC68Q9H2F9 335 aa17.73■□□□□ 0.43
PDLIM7-209ENST00000503346 HRASLS2Q9NWW9 162 aa17.73■□□□□ 0.43
PDLIM7-209ENST00000503346 SEMA5BQ9P283 1151 aa17.73■□□□□ 0.43
PDLIM7-209ENST00000503346 KLHL42Q9P2K6 505 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms