RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 SOX17Q9H6I2 414 aaPredicted RBP16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 OR6C70A6NIJ9 312 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 KCNAB2Q13303 367 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 LCN8Q6JVE9 175 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 CXCL17Q6UXB2 119 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 CERS6Q6ZMG9 384 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 MOB2Q70IA6 237 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 TMEM135Q86UB9 458 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 SMURF2Q9HAU4 748 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 SNTG1Q9NSN8 517 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 UBE2QL1A1L167 161 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 SNX4O95219 450 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 IGSF6O95976 241 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 MYL9P24844 172 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 VARSP26640 1264 aaKnown RBP16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 HTR1EP28566 365 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 PBX3P40426 434 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 HSPA7P48741 367 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 SCNN1GP51170 649 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 YBEYP58557 167 aaPredicted RBP16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 XKR6Q5GH73 641 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 RBM20Q5T481 1227 aaKnown RBP16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 TAC4Q86UU9 113 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 LAPTM4BQ86VI4 370 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 MON1AQ86VX9 555 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 TFAP2CQ92754 450 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 ZNF641Q96N77 438 aaPredicted RBP16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 BCL7BQ9BQE9 202 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 CPNE5Q9HCH3 593 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 EXD2Q9NVH0 621 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 B3GNT3Q9Y2A9 372 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 USP2O75604 605 aaPredicted RBP16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 HSD17B1P14061 328 aa16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 PBLDP30039 288 aaPredicted RBP16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 RPS14P62263 151 aaKnown RBP16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 INCA1Q0VD86 236 aa16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 OLIG2Q13516 323 aa16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 ZNF678Q5SXM1 525 aa16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 SYCE2Q6PIF2 218 aa16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 OR4A15Q8NGL6 344 aa16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 PGLYRP2Q96PD5 576 aa16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 YIPF2Q9BWQ6 316 aa16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 CMTM6Q9NX76 183 aa16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 PCDHGA7Q9Y5G6 932 aa16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 PRSS51A0A1B0GVH4 220 aa16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 ACOX1Q15067 660 aa16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 IRAK1BP1Q5VVH5 260 aa16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 C8orf48Q96LL4 319 aa16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 CIPCQ9C0C6 399 aa16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 PCDHGB3Q9Y5G1 929 aa16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 SNX10Q9Y5X0 201 aa16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 DYRK3O43781 588 aa16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 RFPL2O75678 378 aa16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 ASMTP46597 345 aa16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 HKDC1Q2TB90 917 aa16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 USP39Q53GS9 565 aaKnown RBP16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 TAS1R3Q7RTX0 852 aa16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 KRT78Q8N1N4 520 aa16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 SLC30A2Q9BRI3 323 aa16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 TRIM8Q9BZR9 551 aa16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 SLC39A8Q9C0K1 460 aa16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 AHDC1Q5TGY3 1603 aaPredicted RBP16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 KRBA1A5PL33 1030 aa16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 MSI1O43347 362 aaKnown RBP16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 LMO2P25791 158 aa16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 TUFMP49411 452 aaKnown RBP16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 TEAD4Q15561 434 aa16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 TMEM236Q5W0B7 351 aa16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 CRYBG2Q8N1P7 616 aa16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 C2CD4AQ8NCU7 369 aaPredicted RBP16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 MYRFLQ96LU7 910 aa16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 PHOX2BQ99453 314 aa16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 AMBNQ9NP70 447 aa16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 PIGVQ9NUD9 493 aa16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 SLC9A8Q9Y2E8 581 aa16.94■□□□□ 0.3
HMGXB3-201ENST00000502717 YJEFN3A6XGL0 299 aa16.93■□□□□ 0.3
HMGXB3-201ENST00000502717 PER2O15055 1255 aa16.93■□□□□ 0.3
HMGXB3-201ENST00000502717 PGRMC2O15173 223 aa16.93■□□□□ 0.3
HMGXB3-201ENST00000502717 CLDN10P78369 228 aa16.93■□□□□ 0.3
HMGXB3-201ENST00000502717 MXD1Q05195 221 aa16.93■□□□□ 0.3
HMGXB3-201ENST00000502717 FAM110CQ1W6H9 321 aa16.93■□□□□ 0.3
HMGXB3-201ENST00000502717 SMU1Q2TAY7 513 aa16.93■□□□□ 0.3
HMGXB3-201ENST00000502717 NDUFAF6Q330K2 333 aa16.93■□□□□ 0.3
HMGXB3-201ENST00000502717 SYPL2Q5VXT5 272 aa16.93■□□□□ 0.3
HMGXB3-201ENST00000502717 NANOGP8Q6NSW7 305 aa16.93■□□□□ 0.3
HMGXB3-201ENST00000502717 DOK6Q6PKX4 331 aa16.93■□□□□ 0.3
HMGXB3-201ENST00000502717 GPR142Q7Z601 462 aa16.93■□□□□ 0.3
HMGXB3-201ENST00000502717 TMEM192Q8IY95 271 aa16.93■□□□□ 0.3
HMGXB3-201ENST00000502717 QRFPRQ96P65 431 aa16.93■□□□□ 0.3
HMGXB3-201ENST00000502717 NANOGQ9H9S0 305 aa16.93■□□□□ 0.3
HMGXB3-201ENST00000502717 TESMINQ9Y4I5 508 aa16.93■□□□□ 0.3
HMGXB3-201ENST00000502717 G3V2L1 256 aa16.93■□□□□ 0.3
HMGXB3-201ENST00000502717 SERPINB7O75635 380 aa16.93■□□□□ 0.3
HMGXB3-201ENST00000502717 FPR1P21462 350 aa16.93■□□□□ 0.3
HMGXB3-201ENST00000502717 PPP5CP53041 499 aa16.93■□□□□ 0.3
HMGXB3-201ENST00000502717 ZNF33AQ06730 810 aa16.93■□□□□ 0.3
HMGXB3-201ENST00000502717 CXXC5Q7LFL8 322 aaKnown RBP16.93■□□□□ 0.3
HMGXB3-201ENST00000502717 ANKRD46Q86W74 232 aa16.93■□□□□ 0.3
HMGXB3-201ENST00000502717 OR52J3Q8NH60 311 aa16.93■□□□□ 0.3
HMGXB3-201ENST00000502717 TEX47Q8TBZ9 253 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms