RNA–Protein interactions for RNA: ENST00000498607.2

SCG5-209, Transcript of secretogranin V, human

TSL 2

Gene SCG5, Length 853 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCG5-209	ENST00000498607	TSN	Q15631	228 aa	Known RBP	11.41	□□□□□ -0.58
SCG5-209	ENST00000498607	METRNL	Q641Q3	311 aa		11.41	□□□□□ -0.58
SCG5-209	ENST00000498607	LAYN	Q6UX15	382 aa		11.41	□□□□□ -0.58
SCG5-209	ENST00000498607	ZYG11A	Q6WRX3	759 aa		11.41	□□□□□ -0.58
SCG5-209	ENST00000498607	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	11.41	□□□□□ -0.58
SCG5-209	ENST00000498607	CHST15	Q7LFX5	561 aa	Predicted RBP	11.41	□□□□□ -0.58
SCG5-209	ENST00000498607	RD3	Q7Z3Z2	195 aa		11.41	□□□□□ -0.58
SCG5-209	ENST00000498607	PDZD3	Q86UT5	571 aa		11.41	□□□□□ -0.58
SCG5-209	ENST00000498607	SPATS2	Q86XZ4	545 aa	Known RBP	11.41	□□□□□ -0.58
SCG5-209	ENST00000498607	RASGRP3	Q8IV61	690 aa		11.41	□□□□□ -0.58
SCG5-209	ENST00000498607	PHACTR4	Q8IZ21	702 aa		11.41	□□□□□ -0.58
SCG5-209	ENST00000498607	TMEM151A	Q8N4L1	468 aa		11.41	□□□□□ -0.58
SCG5-209	ENST00000498607	CCDC63	Q8NA47	563 aa		11.41	□□□□□ -0.58
SCG5-209	ENST00000498607	STAG3L4	Q8TBR4	150 aa		11.41	□□□□□ -0.58
SCG5-209	ENST00000498607	ATOH8	Q96SQ7	321 aa		11.41	□□□□□ -0.58
SCG5-209	ENST00000498607	OR52A5	Q9H2C5	316 aa		11.41	□□□□□ -0.58
SCG5-209	ENST00000498607	MLXIPL	Q9NP71	852 aa		11.41	□□□□□ -0.58
SCG5-209	ENST00000498607	KLC4	Q9NSK0	619 aa		11.41	□□□□□ -0.58
SCG5-209	ENST00000498607	IKZF3	Q9UKT9	509 aa		11.41	□□□□□ -0.58
SCG5-209	ENST00000498607	ACSL5	Q9ULC5	683 aa		11.41	□□□□□ -0.58
SCG5-209	ENST00000498607	PNMA8B	Q9ULN7	279 aa	Predicted RBP	11.41	□□□□□ -0.58
SCG5-209	ENST00000498607	KCNK6	Q9Y257	313 aa		11.41	□□□□□ -0.58
SCG5-209	ENST00000498607	DNAJC16	Q9Y2G8	782 aa		11.41	□□□□□ -0.58
SCG5-209	ENST00000498607	ATXN2	Q99700	1313 aa	Known RBP	11.4	□□□□□ -0.58
SCG5-209	ENST00000498607	SYCE1L	A8MT33	242 aa		11.4	□□□□□ -0.58
SCG5-209	ENST00000498607	SLC16A5	O15375	505 aa		11.4	□□□□□ -0.58
SCG5-209	ENST00000498607	BIRC5	O15392	142 aa		11.4	□□□□□ -0.58
SCG5-209	ENST00000498607	MATN4	O95460	622 aa		11.4	□□□□□ -0.58
SCG5-209	ENST00000498607	SBK3	P0C264	359 aa		11.4	□□□□□ -0.58
SCG5-209	ENST00000498607	SLC35G4	P0C7Q5	338 aa		11.4	□□□□□ -0.58
SCG5-209	ENST00000498607	MYL2	P10916	166 aa		11.4	□□□□□ -0.58
SCG5-209	ENST00000498607	CPA3	P15088	417 aa		11.4	□□□□□ -0.58
SCG5-209	ENST00000498607	TAC1	P20366	129 aa		11.4	□□□□□ -0.58
SCG5-209	ENST00000498607	PDHA2	P29803	388 aa		11.4	□□□□□ -0.58
SCG5-209	ENST00000498607	SERPINB4	P48594	390 aa		11.4	□□□□□ -0.58
SCG5-209	ENST00000498607	CSNK1E	P49674	416 aa	Known RBP	11.4	□□□□□ -0.58
SCG5-209	ENST00000498607	C21orf59	P57076	290 aa		11.4	□□□□□ -0.58
SCG5-209	ENST00000498607	CTBS	Q01459	385 aa		11.4	□□□□□ -0.58
SCG5-209	ENST00000498607	SIM2	Q14190	667 aa	Predicted RBP	11.4	□□□□□ -0.58
SCG5-209	ENST00000498607	PEAR1	Q5VY43	1037 aa	Predicted RBP	11.4	□□□□□ -0.58
SCG5-209	ENST00000498607	BRICD5	Q6PL45	260 aa		11.4	□□□□□ -0.58
SCG5-209	ENST00000498607	SBSN	Q6UWP8	590 aa		11.4	□□□□□ -0.58
SCG5-209	ENST00000498607	GPSM1	Q86YR5	675 aa		11.4	□□□□□ -0.58
SCG5-209	ENST00000498607	SKA2	Q8WVK7	121 aa	Predicted RBP	11.4	□□□□□ -0.58
SCG5-209	ENST00000498607	ASB11	Q8WXH4	323 aa		11.4	□□□□□ -0.58
SCG5-209	ENST00000498607	FOPNL	Q96NB1	174 aa		11.4	□□□□□ -0.58
SCG5-209	ENST00000498607	TMEM168	Q9H0V1	697 aa		11.4	□□□□□ -0.58
SCG5-209	ENST00000498607	OSGEPL1	Q9H4B0	414 aa		11.4	□□□□□ -0.58
SCG5-209	ENST00000498607	CPSF2	Q9P2I0	782 aa	Known RBP	11.4	□□□□□ -0.58
SCG5-209	ENST00000498607	COPG2	Q9UBF2	871 aa		11.4	□□□□□ -0.58
SCG5-209	ENST00000498607	PILRB	Q9UKJ0	227 aa		11.4	□□□□□ -0.58
SCG5-209	ENST00000498607	RNF112	Q9ULX5	631 aa		11.4	□□□□□ -0.58
SCG5-209	ENST00000498607	TMCO1	Q9UM00	188 aa		11.4	□□□□□ -0.58
SCG5-209	ENST00000498607	PLEKHM1	Q9Y4G2	1056 aa		11.4	□□□□□ -0.58
SCG5-209	ENST00000498607	TDRD6	O60522	2096 aa	Known RBP	11.4	□□□□□ -0.58
SCG5-209	ENST00000498607	SUPT3H	B4E1H0	165 aa		11.39	□□□□□ -0.59
SCG5-209	ENST00000498607		G3V2L1	256 aa		11.39	□□□□□ -0.59
SCG5-209	ENST00000498607	GFY	I3L273	518 aa		11.39	□□□□□ -0.59
SCG5-209	ENST00000498607	SCAMP1	O15126	338 aa		11.39	□□□□□ -0.59
SCG5-209	ENST00000498607	SMIM24	O75264	130 aa		11.39	□□□□□ -0.59
SCG5-209	ENST00000498607	PSIP1	O75475	530 aa	Known RBP	11.39	□□□□□ -0.59
SCG5-209	ENST00000498607	SUPT3H	O75486	399 aa		11.39	□□□□□ -0.59
SCG5-209	ENST00000498607	CAT	P04040	527 aa	Known RBP	11.39	□□□□□ -0.59
SCG5-209	ENST00000498607	BPGM	P07738	259 aa		11.39	□□□□□ -0.59
SCG5-209	ENST00000498607	ENO2	P09104	434 aa	Predicted RBP	11.39	□□□□□ -0.59
SCG5-209	ENST00000498607	NME1	P15531	152 aa	Known RBP	11.39	□□□□□ -0.59
SCG5-209	ENST00000498607	IDS	P22304	550 aa		11.39	□□□□□ -0.59
SCG5-209	ENST00000498607	ATP5F1	P24539	256 aa	Predicted RBP	11.39	□□□□□ -0.59
SCG5-209	ENST00000498607	ACADL	P28330	430 aa		11.39	□□□□□ -0.59
SCG5-209	ENST00000498607	MDH1	P40925	334 aa	Known RBP	11.39	□□□□□ -0.59
SCG5-209	ENST00000498607	KCNC1	P48547	511 aa		11.39	□□□□□ -0.59
SCG5-209	ENST00000498607	IL9R	Q01113	521 aa		11.39	□□□□□ -0.59
SCG5-209	ENST00000498607	ILF3	Q12906	894 aa	Known RBP eCLIP	11.39	□□□□□ -0.59
SCG5-209	ENST00000498607	PCLAF	Q15004	111 aa		11.39	□□□□□ -0.59
SCG5-209	ENST00000498607	PPP1R3A	Q16821	1122 aa		11.39	□□□□□ -0.59
SCG5-209	ENST00000498607	BLOC1S3	Q6QNY0	202 aa		11.39	□□□□□ -0.59
SCG5-209	ENST00000498607	LYPD8	Q6UX82	237 aa		11.39	□□□□□ -0.59
SCG5-209	ENST00000498607	UNC5D	Q6UXZ4	953 aa		11.39	□□□□□ -0.59
SCG5-209	ENST00000498607	WASH2P	Q6VEQ5	465 aa		11.39	□□□□□ -0.59
SCG5-209	ENST00000498607	FRA10AC1	Q70Z53	315 aa		11.39	□□□□□ -0.59
SCG5-209	ENST00000498607	RABEPK	Q7Z6M1	372 aa		11.39	□□□□□ -0.59
SCG5-209	ENST00000498607	SYT12	Q8IV01	421 aa		11.39	□□□□□ -0.59
SCG5-209	ENST00000498607	GPBAR1	Q8TDU6	330 aa		11.39	□□□□□ -0.59
SCG5-209	ENST00000498607	DLG3	Q92796	817 aa		11.39	□□□□□ -0.59
SCG5-209	ENST00000498607	THAP11	Q96EK4	314 aa		11.39	□□□□□ -0.59
SCG5-209	ENST00000498607	RMDN2	Q96LZ7	410 aa		11.39	□□□□□ -0.59
SCG5-209	ENST00000498607	PAIP2	Q9BPZ3	127 aa	Known RBP	11.39	□□□□□ -0.59
SCG5-209	ENST00000498607	SLC12A9	Q9BXP2	914 aa		11.39	□□□□□ -0.59
SCG5-209	ENST00000498607	GSDMC	Q9BYG8	508 aa		11.39	□□□□□ -0.59
SCG5-209	ENST00000498607	TRIM54	Q9BYV2	358 aa		11.39	□□□□□ -0.59
SCG5-209	ENST00000498607	RDH14	Q9HBH5	336 aa		11.39	□□□□□ -0.59
SCG5-209	ENST00000498607	WASH6P	Q9NQA3	447 aa		11.39	□□□□□ -0.59
SCG5-209	ENST00000498607	DNAJC28	Q9NX36	388 aa		11.39	□□□□□ -0.59
SCG5-209	ENST00000498607	NUDT4	Q9NZJ9	180 aa		11.39	□□□□□ -0.59
SCG5-209	ENST00000498607	APOBEC3B	Q9UH17	382 aa	Known RBP	11.39	□□□□□ -0.59
SCG5-209	ENST00000498607	KLF15	Q9UIH9	416 aa		11.39	□□□□□ -0.59
SCG5-209	ENST00000498607	ADAMTS6	Q9UKP5	1117 aa		11.39	□□□□□ -0.59
SCG5-209	ENST00000498607	OARD1	Q9Y530	152 aa		11.39	□□□□□ -0.59
SCG5-209	ENST00000498607	ST14	Q9Y5Y6	855 aa		11.39	□□□□□ -0.59
SCG5-209	ENST00000498607	BPTF	Q12830	3046 aa		11.39	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms