RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 CTNNA2P26232 953 aa11.69□□□□□ -0.54
CNOT4-211ENST00000498534 RBL1P28749 1068 aa11.69□□□□□ -0.54
CNOT4-211ENST00000498534 PRDX3P30048 256 aaKnown RBP11.69□□□□□ -0.54
CNOT4-211ENST00000498534 PTGIRP43119 386 aa11.69□□□□□ -0.54
CNOT4-211ENST00000498534 VAV2P52735 878 aa11.69□□□□□ -0.54
CNOT4-211ENST00000498534 RRADP55042 308 aa11.69□□□□□ -0.54
CNOT4-211ENST00000498534 LAMB3Q13751 1172 aa11.69□□□□□ -0.54
CNOT4-211ENST00000498534 BBS12Q6ZW61 710 aa11.69□□□□□ -0.54
CNOT4-211ENST00000498534 MED25Q71SY5 747 aa11.69□□□□□ -0.54
CNOT4-211ENST00000498534 DAAM2Q86T65 1068 aa11.69□□□□□ -0.54
CNOT4-211ENST00000498534 HOOK3Q86VS8 718 aa11.69□□□□□ -0.54
CNOT4-211ENST00000498534 ENDOVQ8N8Q3 282 aaKnown RBP11.69□□□□□ -0.54
CNOT4-211ENST00000498534 TMEM102Q8N9M5 508 aaPredicted RBP11.69□□□□□ -0.54
CNOT4-211ENST00000498534 RMDN2Q96LZ7 410 aa11.69□□□□□ -0.54
CNOT4-211ENST00000498534 PPM1MQ96MI6 270 aa11.69□□□□□ -0.54
CNOT4-211ENST00000498534 PPP1R2P1Q96PQ5 205 aa11.69□□□□□ -0.54
CNOT4-211ENST00000498534 C19orf43Q9BQ61 176 aa11.69□□□□□ -0.54
CNOT4-211ENST00000498534 DPH2Q9BQC3 489 aaPredicted RBP11.69□□□□□ -0.54
CNOT4-211ENST00000498534 VPS37BQ9H9H4 285 aa11.69□□□□□ -0.54
CNOT4-211ENST00000498534 LUC7LQ9NQ29 371 aaKnown RBP11.69□□□□□ -0.54
CNOT4-211ENST00000498534 FKBPLQ9UIM3 349 aa11.69□□□□□ -0.54
CNOT4-211ENST00000498534 MAP4K5Q9Y4K4 846 aa11.69□□□□□ -0.54
CNOT4-211ENST00000498534 SEC16AO15027 2179 aa11.69□□□□□ -0.54
CNOT4-211ENST00000498534 MED13Q9UHV7 2174 aa11.69□□□□□ -0.54
CNOT4-211ENST00000498534 NOTCH2Q04721 2471 aa11.69□□□□□ -0.54
CNOT4-211ENST00000498534 TNRC6AQ8NDV7 1962 aaKnown RBP11.68□□□□□ -0.54
CNOT4-211ENST00000498534 SPTBP11277 2137 aa11.68□□□□□ -0.54
CNOT4-211ENST00000498534 ESPL1Q14674 2120 aa11.68□□□□□ -0.54
CNOT4-211ENST00000498534 A6NL46 340 aa11.68□□□□□ -0.54
CNOT4-211ENST00000498534 AGAP14A8MT82 685 aa11.68□□□□□ -0.54
CNOT4-211ENST00000498534 TMEM150CB9EJG8 249 aa11.68□□□□□ -0.54
CNOT4-211ENST00000498534 C9J4A7 227 aa11.68□□□□□ -0.54
CNOT4-211ENST00000498534 ZNF185O15231 689 aa11.68□□□□□ -0.54
CNOT4-211ENST00000498534 DDX3YO15523 660 aaKnown RBP11.68□□□□□ -0.54
CNOT4-211ENST00000498534 CEACAM4O75871 244 aa11.68□□□□□ -0.54
CNOT4-211ENST00000498534 LCA5LO95447 670 aa11.68□□□□□ -0.54
CNOT4-211ENST00000498534 MSL3P1P0C860 447 aa11.68□□□□□ -0.54
CNOT4-211ENST00000498534 ADRA1AP35348 466 aa11.68□□□□□ -0.54
CNOT4-211ENST00000498534 CETN2P41208 172 aa11.68□□□□□ -0.54
CNOT4-211ENST00000498534 UQCRFS1P47985 274 aa11.68□□□□□ -0.54
CNOT4-211ENST00000498534 CD151P48509 253 aa11.68□□□□□ -0.54
CNOT4-211ENST00000498534 PRLHRP49683 370 aa11.68□□□□□ -0.54
CNOT4-211ENST00000498534 COPS2P61201 443 aa11.68□□□□□ -0.54
CNOT4-211ENST00000498534 TMPRSS15P98073 1019 aa11.68□□□□□ -0.54
CNOT4-211ENST00000498534 XIAPP98170 497 aa11.68□□□□□ -0.54
CNOT4-211ENST00000498534 INPP5JQ15735 1006 aaPredicted RBP11.68□□□□□ -0.54
CNOT4-211ENST00000498534 GPR33Q49SQ1 333 aa11.68□□□□□ -0.54
CNOT4-211ENST00000498534 ANKRD20A2Q5SQ80 823 aa11.68□□□□□ -0.54
CNOT4-211ENST00000498534 ANKRD20A1Q5TYW2 823 aa11.68□□□□□ -0.54
CNOT4-211ENST00000498534 PRAMEF17Q5VTA0 474 aa11.68□□□□□ -0.54
CNOT4-211ENST00000498534 ANKRD20A3Q5VUR7 823 aa11.68□□□□□ -0.54
CNOT4-211ENST00000498534 JMJD6Q6NYC1 403 aaPredicted RBP11.68□□□□□ -0.54
CNOT4-211ENST00000498534 DARS2Q6PI48 645 aaKnown RBP11.68□□□□□ -0.54
CNOT4-211ENST00000498534 SARM1Q6SZW1 724 aa11.68□□□□□ -0.54
CNOT4-211ENST00000498534 SNX20Q7Z614 316 aa11.68□□□□□ -0.54
CNOT4-211ENST00000498534 GPR135Q8IZ08 494 aa11.68□□□□□ -0.54
CNOT4-211ENST00000498534 NXPE1Q8N323 547 aa11.68□□□□□ -0.54
CNOT4-211ENST00000498534 PHC3Q8NDX5 983 aa11.68□□□□□ -0.54
CNOT4-211ENST00000498534 OR1L3Q8NH93 324 aa11.68□□□□□ -0.54
CNOT4-211ENST00000498534 ADAMTS17Q8TE56 1095 aa11.68□□□□□ -0.54
CNOT4-211ENST00000498534 NAT14Q8WUY8 206 aa11.68□□□□□ -0.54
CNOT4-211ENST00000498534 N4BP2L2Q92802 583 aaPredicted RBP11.68□□□□□ -0.54
CNOT4-211ENST00000498534 C17orf62Q9BQA9 187 aa11.68□□□□□ -0.54
CNOT4-211ENST00000498534 APOL2Q9BQE5 337 aa11.68□□□□□ -0.54
CNOT4-211ENST00000498534 GOLPH3Q9H4A6 298 aa11.68□□□□□ -0.54
CNOT4-211ENST00000498534 TFB2MQ9H5Q4 396 aaKnown RBP11.68□□□□□ -0.54
CNOT4-211ENST00000498534 FAM96AQ9H5X1 160 aa11.68□□□□□ -0.54
CNOT4-211ENST00000498534 MVB12BQ9H7P6 319 aa11.68□□□□□ -0.54
CNOT4-211ENST00000498534 MAP10Q9P2G4 905 aa11.68□□□□□ -0.54
CNOT4-211ENST00000498534 PLEKHB1Q9UF11 243 aaPredicted RBP11.68□□□□□ -0.54
CNOT4-211ENST00000498534 FEZ2Q9UHY8 353 aaPredicted RBP11.68□□□□□ -0.54
CNOT4-211ENST00000498534 PADI2Q9Y2J8 665 aa11.68□□□□□ -0.54
CNOT4-211ENST00000498534 ICE1Q9Y2F5 2266 aa11.67□□□□□ -0.54
CNOT4-211ENST00000498534 MACROD2A1Z1Q3 448 aa11.67□□□□□ -0.54
CNOT4-211ENST00000498534 C2orf74A8MZ97 194 aa11.67□□□□□ -0.54
CNOT4-211ENST00000498534 E7EQ34 232 aa11.67□□□□□ -0.54
CNOT4-211ENST00000498534 KCNN4O15554 427 aa11.67□□□□□ -0.54
CNOT4-211ENST00000498534 SGTAO43765 313 aa11.67□□□□□ -0.54
CNOT4-211ENST00000498534 KLHL41O60662 606 aa11.67□□□□□ -0.54
CNOT4-211ENST00000498534 CD63P08962 238 aa11.67□□□□□ -0.54
CNOT4-211ENST00000498534 ST6GAL1P15907 406 aa11.67□□□□□ -0.54
CNOT4-211ENST00000498534 RORAP35398 523 aa11.67□□□□□ -0.54
CNOT4-211ENST00000498534 ITGA1P56199 1179 aa11.67□□□□□ -0.54
CNOT4-211ENST00000498534 EIF3EP60228 445 aaKnown RBP11.67□□□□□ -0.54
CNOT4-211ENST00000498534 ABRQ12979 859 aa11.67□□□□□ -0.54
CNOT4-211ENST00000498534 RPA4Q13156 261 aa11.67□□□□□ -0.54
CNOT4-211ENST00000498534 SPA17Q15506 151 aa11.67□□□□□ -0.54
CNOT4-211ENST00000498534 LCN10Q6JVE6 187 aa11.67□□□□□ -0.54
CNOT4-211ENST00000498534 TAS2R42Q7RTR8 314 aa11.67□□□□□ -0.54
CNOT4-211ENST00000498534 AMIGO1Q86WK6 493 aa11.67□□□□□ -0.54
CNOT4-211ENST00000498534 RAB43Q86YS6 212 aa11.67□□□□□ -0.54
CNOT4-211ENST00000498534 CDKL3Q8IVW4 592 aaPredicted RBP11.67□□□□□ -0.54
CNOT4-211ENST00000498534 SYTL1Q8IYJ3 562 aa11.67□□□□□ -0.54
CNOT4-211ENST00000498534 LILRA3Q8N6C8 439 aaPredicted RBP11.67□□□□□ -0.54
CNOT4-211ENST00000498534 GLIS1Q8NBF1 620 aa11.67□□□□□ -0.54
CNOT4-211ENST00000498534 FDCSPQ8NFU4 85 aa11.67□□□□□ -0.54
CNOT4-211ENST00000498534 OR13C4Q8NGS5 318 aa11.67□□□□□ -0.54
CNOT4-211ENST00000498534 ACTL9Q8TC94 416 aa11.67□□□□□ -0.54
CNOT4-211ENST00000498534 SSC4DQ8WTU2 575 aa11.67□□□□□ -0.54
CNOT4-211ENST00000498534 TFGQ92734 400 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms