RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 IRF4Q15306 451 aa7.91□□□□□ -1.14
PDZRN3-212ENST00000498048 C18orf21Q32NC0 220 aaPredicted RBP7.91□□□□□ -1.14
PDZRN3-212ENST00000498048 DNAL1Q4LDG9 190 aa7.91□□□□□ -1.14
PDZRN3-212ENST00000498048 TMEM198Q66K66 360 aa7.91□□□□□ -1.14
PDZRN3-212ENST00000498048 KIAA1161Q6NSJ0 714 aa7.91□□□□□ -1.14
PDZRN3-212ENST00000498048 KIAA1211LQ6NV74 962 aa7.91□□□□□ -1.14
PDZRN3-212ENST00000498048 DOK6Q6PKX4 331 aa7.91□□□□□ -1.14
PDZRN3-212ENST00000498048 ADAMTSL4Q6UY14 1074 aa7.91□□□□□ -1.14
PDZRN3-212ENST00000498048 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.91□□□□□ -1.14
PDZRN3-212ENST00000498048 RINLQ6ZS11 566 aa7.91□□□□□ -1.14
PDZRN3-212ENST00000498048 SYVN1Q86TM6 617 aa7.91□□□□□ -1.14
PDZRN3-212ENST00000498048 LAPTM4BQ86VI4 370 aa7.91□□□□□ -1.14
PDZRN3-212ENST00000498048 VRK3Q8IV63 474 aa7.91□□□□□ -1.14
PDZRN3-212ENST00000498048 CLYBLQ8N0X4 340 aa7.91□□□□□ -1.14
PDZRN3-212ENST00000498048 ARHGAP24Q8N264 748 aa7.91□□□□□ -1.14
PDZRN3-212ENST00000498048 IL17RCQ8NAC3 791 aa7.91□□□□□ -1.14
PDZRN3-212ENST00000498048 CEP70Q8NHQ1 597 aa7.91□□□□□ -1.14
PDZRN3-212ENST00000498048 HM13Q8TCT9 377 aa7.91□□□□□ -1.14
PDZRN3-212ENST00000498048 ACTRT2Q8TDY3 377 aa7.91□□□□□ -1.14
PDZRN3-212ENST00000498048 ESAMQ96AP7 390 aa7.91□□□□□ -1.14
PDZRN3-212ENST00000498048 RHBDF1Q96CC6 855 aa7.91□□□□□ -1.14
PDZRN3-212ENST00000498048 MSANTD3Q96H12 275 aa7.91□□□□□ -1.14
PDZRN3-212ENST00000498048 HIC2Q96JB3 615 aa7.91□□□□□ -1.14
PDZRN3-212ENST00000498048 CCM2Q9BSQ5 444 aa7.91□□□□□ -1.14
PDZRN3-212ENST00000498048 HGH1Q9BTY7 390 aa7.91□□□□□ -1.14
PDZRN3-212ENST00000498048 OR2AG1Q9H205 316 aa7.91□□□□□ -1.14
PDZRN3-212ENST00000498048 ZBTB26Q9HCK0 441 aa7.91□□□□□ -1.14
PDZRN3-212ENST00000498048 TRPV5Q9NQA5 729 aa7.91□□□□□ -1.14
PDZRN3-212ENST00000498048 ARHGEF3Q9NR81 526 aa7.91□□□□□ -1.14
PDZRN3-212ENST00000498048 MRGBPQ9NV56 204 aa7.91□□□□□ -1.14
PDZRN3-212ENST00000498048 ARL15Q9NXU5 204 aa7.91□□□□□ -1.14
PDZRN3-212ENST00000498048 PDE10AQ9Y233 779 aa7.91□□□□□ -1.14
PDZRN3-212ENST00000498048 PTGDR2Q9Y5Y4 395 aa7.91□□□□□ -1.14
PDZRN3-212ENST00000498048 TNRC6BQ9UPQ9 1833 aaKnown RBP7.91□□□□□ -1.14
PDZRN3-212ENST00000498048 IGLON5A6NGN9 336 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 K7EPI3 171 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 PPP6CO00743 305 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 LIN7AO14910 233 aaPredicted RBP7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 PLRG1O43660 514 aaKnown RBP7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 VEGFDO43915 354 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 ADAM23O75077 832 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 GPC4O75487 556 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 WDR47O94967 919 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 OTCP00480 354 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 ASGR2P07307 311 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 HIST1H2AGP0C0S8 130 aaPredicted RBP7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 UROSP10746 265 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 COX4I1P13073 169 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 HIST1H2ADP20671 130 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 MAP4P27816 1152 aaKnown RBP7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 PRDX3P30048 256 aaKnown RBP7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 RPIAP49247 311 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 ADPRHP54922 357 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 AP1S2P56377 157 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 MRPS21P82921 87 aaKnown RBP7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 CDK3Q00526 305 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 HERC3Q15034 1050 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 MAPRE2Q15555 327 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 ZRSR2Q15696 482 aaKnown RBP7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 KIF19Q2TAC6 998 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 CDKL4Q5MAI5 379 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 SWT1Q5T5J6 900 aaKnown RBP7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 FBXW10Q5XX13 1052 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 LETMD1Q6P1Q0 360 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 METTL2BQ6P1Q9 378 aaKnown RBP7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 CYB5D1Q6P9G0 228 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 TMEM220Q6QAJ8 160 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 KIAA1324Q6UXG2 1013 aaKnown RBP7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 ADGRG6Q86SQ4 1221 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 SNX32Q86XE0 403 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 SLC22A15Q8IZD6 547 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 CDYL2Q8N8U2 506 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 DCBLD1Q8N8Z6 715 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 SNX31Q8N9S9 440 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 PLA2G15Q8NCC3 412 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 OR52B6Q8NGF0 335 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 RPLP0P6Q8NHW5 317 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 DLG3Q92796 817 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 ATP6V1E2Q96A05 226 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 CMTM5Q96DZ9 223 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 ZNF514Q96K75 400 aaPredicted RBP7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 HIST1H2AHQ96KK5 128 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 FOPNLQ96NB1 174 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 MIPEPQ99797 713 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 HIST1H2AJQ99878 128 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 BTBD10Q9BSF8 475 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 H2AFJQ9BTM1 129 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 TMUB1Q9BVT8 246 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 TBC1D10AQ9BXI6 508 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 C1QTNF7Q9BXJ2 289 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 CD244Q9BZW8 370 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 SLC6A17Q9H1V8 727 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 RASSF4Q9H2L5 321 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 EPHX3Q9H6B9 360 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 WDR26Q9H7D7 661 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 NOL11Q9H8H0 719 aaKnown RBP7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 KCNK12Q9HB15 430 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 PARVBQ9HBI1 364 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 PFDN4Q9NQP4 134 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 RIC8BQ9NVN3 520 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms