RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 MSH2P43246 934 aa3.22□□□□□ -1.89
SMC4-227ENST00000497984 GALCP54803 685 aa3.22□□□□□ -1.89
SMC4-227ENST00000497984 GPR17Q13304 367 aa3.22□□□□□ -1.89
SMC4-227ENST00000497984 HNRNPDQ14103 355 aaKnown RBP3.22□□□□□ -1.89
SMC4-227ENST00000497984 CRYMQ14894 314 aa3.22□□□□□ -1.89
SMC4-227ENST00000497984 RRS1Q15050 365 aaKnown RBP3.22□□□□□ -1.89
SMC4-227ENST00000497984 ASTE1Q2TB18 679 aaPredicted RBP3.22□□□□□ -1.89
SMC4-227ENST00000497984 ZSCAN23Q3MJ62 389 aa3.22□□□□□ -1.89
SMC4-227ENST00000497984 ZDHHC20Q5W0Z9 365 aa3.22□□□□□ -1.89
SMC4-227ENST00000497984 FAAH2Q6GMR7 532 aa3.22□□□□□ -1.89
SMC4-227ENST00000497984 KLHL35Q6PF15 583 aa3.22□□□□□ -1.89
SMC4-227ENST00000497984 CFAP77Q6ZQR2 320 aa3.22□□□□□ -1.89
SMC4-227ENST00000497984 GPRIN3Q6ZVF9 776 aa3.22□□□□□ -1.89
SMC4-227ENST00000497984 GALNT5Q7Z7M9 940 aa3.22□□□□□ -1.89
SMC4-227ENST00000497984 LRRTM1Q86UE6 522 aa3.22□□□□□ -1.89
SMC4-227ENST00000497984 MCEMP1Q8IX19 187 aa3.22□□□□□ -1.89
SMC4-227ENST00000497984 DCLK2Q8N568 766 aa3.22□□□□□ -1.89
SMC4-227ENST00000497984 UCMAQ8WVF2 138 aa3.22□□□□□ -1.89
SMC4-227ENST00000497984 HDAC2Q92769 488 aaKnown RBP3.22□□□□□ -1.89
SMC4-227ENST00000497984 MAGED4Q96JG8 741 aa3.22□□□□□ -1.89
SMC4-227ENST00000497984 GPATCH1Q9BRR8 931 aaKnown RBP3.22□□□□□ -1.89
SMC4-227ENST00000497984 P2RY12Q9H244 342 aa3.22□□□□□ -1.89
SMC4-227ENST00000497984 KAT14Q9H8E8 782 aa3.22□□□□□ -1.89
SMC4-227ENST00000497984 INTS9Q9NV88 658 aaKnown RBP3.22□□□□□ -1.89
SMC4-227ENST00000497984 TAB2Q9NYJ8 693 aa3.22□□□□□ -1.89
SMC4-227ENST00000497984 FLRT3Q9NZU0 649 aa3.22□□□□□ -1.89
SMC4-227ENST00000497984 EPHA6Q9UF33 1036 aa3.22□□□□□ -1.89
SMC4-227ENST00000497984 SLC7A7Q9UM01 511 aa3.22□□□□□ -1.89
SMC4-227ENST00000497984 NENFQ9UMX5 172 aa3.22□□□□□ -1.89
SMC4-227ENST00000497984 MOB4Q9Y3A3 225 aa3.22□□□□□ -1.89
SMC4-227ENST00000497984 KLF2Q9Y5W3 355 aaPredicted RBP3.22□□□□□ -1.89
SMC4-227ENST00000497984 ASTN2O75129 1339 aaPredicted RBP3.21□□□□□ -1.89
SMC4-227ENST00000497984 MYO1GB0I1T2 1018 aa3.21□□□□□ -1.9
SMC4-227ENST00000497984 EPM2AB3EWF7 344 aa3.21□□□□□ -1.9
SMC4-227ENST00000497984 TMEM189-UBE2V1I3L0A0 370 aa3.21□□□□□ -1.9
SMC4-227ENST00000497984 J3QR06 171 aa3.21□□□□□ -1.9
SMC4-227ENST00000497984 ZBTB43O43298 467 aa3.21□□□□□ -1.9
SMC4-227ENST00000497984 ACADMP11310 421 aa3.21□□□□□ -1.9
SMC4-227ENST00000497984 CAPN2P17655 700 aa3.21□□□□□ -1.9
SMC4-227ENST00000497984 UGT1A4P22310 534 aa3.21□□□□□ -1.9
SMC4-227ENST00000497984 TM4SF1P30408 202 aa3.21□□□□□ -1.9
SMC4-227ENST00000497984 PTGER3P43115 390 aa3.21□□□□□ -1.9
SMC4-227ENST00000497984 CAMPP49913 170 aa3.21□□□□□ -1.9
SMC4-227ENST00000497984 SETQ01105 290 aaPredicted RBP3.21□□□□□ -1.9
SMC4-227ENST00000497984 LGALS3BPQ08380 585 aa3.21□□□□□ -1.9
SMC4-227ENST00000497984 COX10Q12887 443 aa3.21□□□□□ -1.9
SMC4-227ENST00000497984 AIMP2Q13155 320 aaKnown RBP3.21□□□□□ -1.9
SMC4-227ENST00000497984 DDX10Q13206 875 aaKnown RBP3.21□□□□□ -1.9
SMC4-227ENST00000497984 UBE2V1Q13404 147 aa3.21□□□□□ -1.9
SMC4-227ENST00000497984 RAPSNQ13702 412 aa3.21□□□□□ -1.9
SMC4-227ENST00000497984 GKAP1Q5VSY0 366 aaPredicted RBP3.21□□□□□ -1.9
SMC4-227ENST00000497984 SNX30Q5VWJ9 437 aa3.21□□□□□ -1.9
SMC4-227ENST00000497984 Q6ZR54 194 aa3.21□□□□□ -1.9
SMC4-227ENST00000497984 ARID3BQ8IVW6 561 aaPredicted RBP3.21□□□□□ -1.9
SMC4-227ENST00000497984 CEP97Q8IW35 865 aa3.21□□□□□ -1.9
SMC4-227ENST00000497984 TEX11Q8IYF3 940 aa3.21□□□□□ -1.9
SMC4-227ENST00000497984 HJURPQ8NCD3 748 aaPredicted RBP3.21□□□□□ -1.9
SMC4-227ENST00000497984 PRSS33Q8NF86 280 aa3.21□□□□□ -1.9
SMC4-227ENST00000497984 SCFD2Q8WU76 684 aa3.21□□□□□ -1.9
SMC4-227ENST00000497984 HPSE2Q8WWQ2 592 aa3.21□□□□□ -1.9
SMC4-227ENST00000497984 MPP4Q96JB8 637 aa3.21□□□□□ -1.9
SMC4-227ENST00000497984 SLC22A12Q96S37 553 aa3.21□□□□□ -1.9
SMC4-227ENST00000497984 LRRC61Q9BV99 259 aa3.21□□□□□ -1.9
SMC4-227ENST00000497984 OLFML3Q9NRN5 406 aa3.21□□□□□ -1.9
SMC4-227ENST00000497984 SETD4Q9NVD3 440 aa3.21□□□□□ -1.9
SMC4-227ENST00000497984 ERAP1Q9NZ08 941 aa3.21□□□□□ -1.9
SMC4-227ENST00000497984 PI4KAP2A4QPH2 592 aa3.2□□□□□ -1.9
SMC4-227ENST00000497984 PGPEP1LA6NFU8 196 aa3.2□□□□□ -1.9
SMC4-227ENST00000497984 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.2□□□□□ -1.9
SMC4-227ENST00000497984 ATP6V0E1O15342 81 aa3.2□□□□□ -1.9
SMC4-227ENST00000497984 HS6ST1O60243 411 aa3.2□□□□□ -1.9
SMC4-227ENST00000497984 ZSCAN5DPP0CG00 497 aa3.2□□□□□ -1.9
SMC4-227ENST00000497984 PRG2P13727 222 aa3.2□□□□□ -1.9
SMC4-227ENST00000497984 PPARGP37231 505 aaPredicted RBP3.2□□□□□ -1.9
SMC4-227ENST00000497984 DCAF7P61962 342 aa3.2□□□□□ -1.9
SMC4-227ENST00000497984 CDR2Q01850 454 aa3.2□□□□□ -1.9
SMC4-227ENST00000497984 PRKAA1Q13131 559 aa3.2□□□□□ -1.9
SMC4-227ENST00000497984 PEX6Q13608 980 aa3.2□□□□□ -1.9
SMC4-227ENST00000497984 KRT32Q14532 448 aa3.2□□□□□ -1.9
SMC4-227ENST00000497984 DNAJC22Q8N4W6 341 aa3.2□□□□□ -1.9
SMC4-227ENST00000497984 HSD17B8Q92506 261 aa3.2□□□□□ -1.9
SMC4-227ENST00000497984 USP6NLQ92738 828 aa3.2□□□□□ -1.9
SMC4-227ENST00000497984 ZKSCAN4Q969J2 545 aaPredicted RBP3.2□□□□□ -1.9
SMC4-227ENST00000497984 ELMOD3Q96FG2 381 aa3.2□□□□□ -1.9
SMC4-227ENST00000497984 CMTM3Q96MX0 182 aa3.2□□□□□ -1.9
SMC4-227ENST00000497984 CLEC7AQ9BXN2 247 aa3.2□□□□□ -1.9
SMC4-227ENST00000497984 ITPAQ9BY32 194 aa3.2□□□□□ -1.9
SMC4-227ENST00000497984 PLK3Q9H4B4 646 aa3.2□□□□□ -1.9
SMC4-227ENST00000497984 MIOSQ9NXC5 875 aa3.2□□□□□ -1.9
SMC4-227ENST00000497984 TSPYL4Q9UJ04 414 aa3.2□□□□□ -1.9
SMC4-227ENST00000497984 CORO1CQ9ULV4 474 aaPredicted RBP3.2□□□□□ -1.9
SMC4-227ENST00000497984 EXO1Q9UQ84 846 aaKnown RBP3.2□□□□□ -1.9
SMC4-227ENST00000497984 CMAHPQ9Y471 501 aa3.2□□□□□ -1.9
SMC4-227ENST00000497984 ZNF644Q9H582 1327 aaPredicted RBP3.19□□□□□ -1.9
SMC4-227ENST00000497984 A0A1W2PPR1 153 aa3.19□□□□□ -1.9
SMC4-227ENST00000497984 H3BQ06 376 aaPredicted RBP3.19□□□□□ -1.9
SMC4-227ENST00000497984 USO1O60763 962 aaKnown RBP3.19□□□□□ -1.9
SMC4-227ENST00000497984 BAIAP3O94812 1187 aa3.19□□□□□ -1.9
SMC4-227ENST00000497984 OR2C1O95371 312 aa3.19□□□□□ -1.9
SMC4-227ENST00000497984 CLDN1O95832 211 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms