RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 COL6A1P12109 1028 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 ARF4P18085 180 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 CD86P42081 329 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 PSMD8P48556 350 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 SLC9A3P48764 834 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 HERVK_113P63132 956 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 PWP1Q13610 501 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 NFE2L1Q14494 772 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 PDZK1Q5T2W1 519 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 CES5AQ6NT32 575 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 HACD2Q6Y1H2 254 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 CYHR1Q6ZMK1 362 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 C16orf62Q7Z3J2 963 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 ZDHHC21Q8IVQ6 265 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 OR8H3Q8N146 312 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 ANKK1Q8NFD2 765 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 ST13P5Q8NFI4 369 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 OR6F1Q8NGZ6 308 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 HCAR2Q8TDS4 363 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 CDCA5Q96FF9 252 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 ERVK-6Q9BXR3 956 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 TLR9Q9NR96 1032 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 ZNF277Q9NRM2 450 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 TRHDEQ9UKU6 1024 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 TRAV19A0A0A6YYK7 116 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 ELOVL7A1L3X0 281 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 TLL1O43897 1013 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 SERPINI2O75830 405 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 C7P10643 843 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 CA5AP35218 305 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 CASP9P55211 416 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 FAM131AQ6UXB0 335 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 PHC2Q8IXK0 858 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 TMEM199Q8N511 208 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 KBTBD8Q8NFY9 601 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 PHF10Q8WUB8 498 aaKnown RBP10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 AKT1S1Q96B36 256 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 DUS3LQ96G46 650 aaKnown RBP10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 EGFL8Q99944 293 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 ACAT2Q9BWD1 397 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 APOL5Q9BWW9 433 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 MKRN2Q9H000 416 aaKnown RBP10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 ACOT13Q9NPJ3 140 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 ABCD2Q9UBJ2 740 aa10.45□□□□□ -0.74
TRAPPC12-223ENST00000497597 MEIOCA2RUB1 952 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 YJEFN3A6XGL0 299 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 CDC7O00311 574 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 HAT1O14929 419 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 GAS2O43903 313 aaKnown RBP10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 TULP3O75386 442 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 PRKACAP17612 351 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 AKT1P31749 480 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 HNF4AP41235 474 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 HTR3AP46098 478 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 ARSDP51689 593 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 OR4D1Q15615 310 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 QSER1Q2KHR3 1735 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 PLEKHG6Q3KR16 790 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 RUNDC3AQ59EK9 446 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 Q5BKY6 102 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 PRSS36Q5K4E3 855 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 ISCA2Q86U28 154 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 NOXA1Q86UR1 476 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 VANGL1Q8TAA9 524 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 ISL2Q96A47 359 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 SIPA1Q96FS4 1042 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 CNDP2Q96KP4 475 aaKnown RBP10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 ITPAQ9BY32 194 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 FBXO8Q9NRD0 319 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 SDR39U1Q9NRG7 319 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 QPCTLQ9NXS2 382 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 VAPAQ9P0L0 249 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 MYO10Q9HD67 2058 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 PSIP1O75475 530 aaKnown RBP10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 BEST1O76090 585 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 ITGB1P05556 798 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 PGRP06401 933 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 STSP08842 583 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 GRIK1P39086 918 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 GMPSP49915 693 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 HTR6P50406 440 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 CLCN5P51795 746 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 FCGRTP55899 365 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 DNAJB13P59910 316 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 HMGCS1Q01581 520 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 AP5B1Q2VPB7 878 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 PAN2Q504Q3 1202 aaKnown RBP10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 ZMAT1Q5H9K5 638 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 VARS2Q5ST30 1063 aaKnown RBP10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 PLEKHM3Q6ZWE6 761 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 TLK2Q86UE8 772 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 TRIB2Q92519 343 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 SLC38A4Q969I6 547 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 TP53INP1Q96A56 240 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 RMDN1Q96DB5 314 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 B3GALT6Q96L58 329 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 TRMOQ9BU70 441 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 KIFC1Q9BW19 673 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 DPY30Q9C005 99 aa10.44□□□□□ -0.74
TRAPPC12-223ENST00000497597 GLOD4Q9HC38 313 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms