RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 AASDHQ4L235 1098 aaPredicted RBP8.21□□□□□ -1.1
USP54-215ENST00000497106 ACSBG2Q5FVE4 666 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 ZNF789Q5FWF6 425 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 XKR6Q5GH73 641 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 CLNKQ7Z7G1 428 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 CLDN19Q8N6F1 224 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 RSRC1Q96IZ7 334 aaKnown RBP8.21□□□□□ -1.1
USP54-215ENST00000497106 COQ10AQ96MF6 247 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 AIF1LQ9BQI0 150 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 DPY30Q9C005 99 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 MVB12BQ9H7P6 319 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 TMEM45AQ9NWC5 275 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 CLEC1BQ9P126 229 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 EIF2B4Q9UI10 523 aaKnown RBP8.21□□□□□ -1.1
USP54-215ENST00000497106 EMCNQ9ULC0 261 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 A0A088AWK7 358 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 EPOPA6NHQ4 379 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 C2CD4DB7Z1M9 353 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 ANHXE9PGG2 379 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 GSTA4O15217 222 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 PCNAP12004 261 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 ZNF10P21506 573 aaPredicted RBP8.2□□□□□ -1.1
USP54-215ENST00000497106 HNRNPA2B1P22626 353 aaKnown RBP8.2□□□□□ -1.1
USP54-215ENST00000497106 RABIFP47224 123 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 HSPA7P48741 367 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 RPS14P62263 151 aaKnown RBP8.2□□□□□ -1.1
USP54-215ENST00000497106 SKP1P63208 163 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 GRIN2CQ14957 1233 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 SMU1Q2TAY7 513 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 GALNTL6Q49A17 601 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 SGO1Q5FBB7 561 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 WDR45BQ5MNZ6 344 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 PNCKQ6P2M8 343 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 EPGNQ6UW88 154 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 SH2D5Q6ZV89 423 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 PAGE2Q7Z2X7 111 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 UBALD2Q8IYN6 164 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 CDYL2Q8N8U2 506 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 TTLQ8NG68 377 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 RPLP0P6Q8NHW5 317 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 UBTD2Q8WUN7 234 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 SLC22A18Q96BI1 424 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 RSPRY1Q96DX4 576 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 OR2M4Q96R27 311 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 ARHGEF3Q9NR81 526 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 HEBP1Q9NRV9 189 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 KANSL1LA0AUZ9 987 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 OR5K4A6NMS3 321 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 MATN2O00339 956 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 SLC31A1O15431 190 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 RASGRP1O95267 797 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 APBB3O95704 486 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 GNAZP19086 355 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 AOAHP28039 575 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 HPCAL1P37235 193 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 YPEL5P62699 121 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 LRP8Q14114 963 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 USP39Q53GS9 565 aaKnown RBP8.2□□□□□ -1.1
USP54-215ENST00000497106 C1orf146Q5VVC0 180 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 BNC2Q6ZN30 1099 aaPredicted RBP8.2□□□□□ -1.1
USP54-215ENST00000497106 SPRED2Q7Z698 418 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 SPDYE1Q8NFV5 336 aaPredicted RBP8.2□□□□□ -1.1
USP54-215ENST00000497106 JADE3Q92613 823 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 FUBP1Q96AE4 644 aaKnown RBP8.2□□□□□ -1.1
USP54-215ENST00000497106 FBXL8Q96CD0 374 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 RTKNQ9BST9 563 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 GIMAP4Q9NUV9 329 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 NOP53Q9NZM5 478 aaKnown RBP8.2□□□□□ -1.1
USP54-215ENST00000497106 HAO1Q9UJM8 370 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 PCDHGA11Q9Y5H2 935 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 SPACA6W5XKT8 324 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 HMX2A2RU54 273 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 TMEM247A6NEH6 219 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 TRIM24O15164 1050 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 SEC22BO75396 215 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 SEMA4FO95754 770 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 PRPS2P11908 318 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 FCARP24071 287 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 HRH2P25021 359 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 CDH13P55290 713 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 ARHGAP8P85298 464 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 BNIP1Q12981 228 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 AGKQ53H12 422 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 ZNF549Q6P9A3 640 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 TECPR1Q7Z6L1 1165 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 PDPRQ8NCN5 879 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 OR9A1PQ8NGU1 263 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 CHFRQ96EP1 664 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 ZNF419Q96HQ0 510 aaPredicted RBP8.2□□□□□ -1.1
USP54-215ENST00000497106 GABRG3Q99928 467 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 MTG2Q9H4K7 406 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 PLAC1Q9HBJ0 212 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 COQ6Q9Y2Z9 468 aa8.2□□□□□ -1.1
USP54-215ENST00000497106 COX4I1P13073 169 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 LHCGRP22888 699 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 CASP2P42575 452 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 GNPDA1P46926 289 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 NUDT2P50583 147 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 ACSM2AQ08AH3 577 aa8.19□□□□□ -1.1
USP54-215ENST00000497106 LRRC74AQ0VAA2 488 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms