RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 TNNI1P19237 187 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 C5AR1P21730 350 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 WARSP23381 471 aaKnown RBP3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 ADRA1DP25100 572 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 TACR3P29371 465 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 CCND2P30279 289 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 RYKP34925 604 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 ARL1P40616 181 aaPredicted RBP3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 MCAMP43121 646 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 LEPRP48357 1165 aaKnown RBP3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 CSNK1DP48730 415 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 LIG4P49917 911 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 CCT4P50991 539 aaKnown RBP3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 PTTG1IPP53801 180 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 SEC24CP53992 1094 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 PDE1AP54750 535 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 TAS2R60P59551 318 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 DCDC1P59894 354 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 PPATQ06203 517 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 SLC3A1Q07837 685 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 MGAT5Q09328 741 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 RESTQ13127 1097 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 PRKAA1Q13131 559 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 DGCR6Q14129 220 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 PDK2Q15119 407 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 ETFDHQ16134 617 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 DGKDQ16760 1214 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 SLC35G1Q2M3R5 365 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 EIF2S3LQ2VIR3 472 aaKnown RBP3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 TNFAIP8L3Q5GJ75 292 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 MPP7Q5T2T1 576 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 KIAA1161Q6NSJ0 714 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 HMBOX1Q6NT76 420 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 BHLHB9Q6PI77 547 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 ARSKQ6UWY0 536 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 SLC16A12Q6ZSM3 486 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 USP45Q70EL2 814 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 MAEAQ7L5Y9 396 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 POGZQ7Z3K3 1410 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 DPPA2Q7Z7J5 298 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 ZFAND4Q86XD8 727 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 RASAL3Q86YV0 1011 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 OR2L3Q8NG85 312 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 GRPEL2Q8TAA5 225 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 LKAAEAR1Q8TD35 194 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 ACTRT2Q8TDY3 377 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 STYXQ8WUJ0 223 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 DNAJC9Q8WXX5 260 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 RSC1A1Q92681 617 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 ISG20Q96AZ6 181 aaKnown RBP3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 FAM136AQ96C01 138 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 RNF31Q96EP0 1072 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 MCRS1Q96EZ8 462 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 ZNF668Q96K58 619 aaPredicted RBP3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 C8orf49Q96NF6 230 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 CGRRF1Q99675 332 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 POTEKPQ9BYX7 375 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 DERL2Q9GZP9 239 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 DDX47Q9H0S4 455 aaKnown RBP3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 ASB8Q9H765 288 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 EXO5Q9H790 373 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 CYP3A43Q9HB55 503 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 CENPMQ9NSP4 180 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 ZFP57Q9NU63 452 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 TMEM160Q9NX00 188 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 NKIRAS1Q9NYS0 192 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 GDE1Q9NZC3 331 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 FTSJ1Q9UET6 329 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 DAPK2Q9UIK4 370 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 MID2Q9UJV3 735 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 DNAJC12Q9UKB3 198 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 RPH3ALQ9UNE2 315 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 PCDHA1Q9Y5I3 950 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 PUS1Q9Y606 427 aaKnown RBP eCLIP3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 KDM5BQ9UGL1 1544 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 LRPPRCP42704 1394 aaKnown RBP3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 STK36Q9NRP7 1315 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 A0A075B6Q4 140 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 MEX3AA1L020 520 aaKnown RBP3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 BTBD17A6NE02 478 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 MARCH11A6NNE9 402 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 EVPLLA8MZ36 301 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 H3BNC9 293 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 ZNF263O14978 683 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 ADAM20O43506 726 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 CALUO43852 315 aaPredicted RBP3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 VEGFDO43915 354 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 MITFO75030 526 aaPredicted RBP3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 RHBDL1O75783 438 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 AKR7A3O95154 331 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 IGHEP01854 428 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 FCER2P06734 321 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 PGK2P07205 417 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 CSF1P09603 554 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 MCF2P10911 925 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 TCF4P15884 667 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 CYP2A7P20853 494 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 PRPS1L1P21108 318 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 YWHAQP27348 245 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 CD1BP29016 333 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms