RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-223ENST00000496296 ITM2BQ9Y287 266 aa20.77■□□□□ 0.92
FGFR1-223ENST00000496296 CFAP99D6REC4 459 aa20.77■□□□□ 0.92
FGFR1-223ENST00000496296 E7ENX8 843 aa20.77■□□□□ 0.92
FGFR1-223ENST00000496296 K7EQS6 105 aa20.77■□□□□ 0.92
FGFR1-223ENST00000496296 C8BP07358 591 aa20.77■□□□□ 0.92
FGFR1-223ENST00000496296 UROSP10746 265 aa20.77■□□□□ 0.92
FGFR1-223ENST00000496296 WASP42768 502 aa20.77■□□□□ 0.92
FGFR1-223ENST00000496296 KIR2DL1P43626 348 aaPredicted RBP20.77■□□□□ 0.92
FGFR1-223ENST00000496296 HENMT1Q5T8I9 393 aaKnown RBP20.77■□□□□ 0.92
FGFR1-223ENST00000496296 IRAK1BP1Q5VVH5 260 aa20.77■□□□□ 0.92
FGFR1-223ENST00000496296 OR56A4Q8NGH8 313 aa20.77■□□□□ 0.92
FGFR1-223ENST00000496296 ZNF382Q96SR6 550 aa20.77■□□□□ 0.92
FGFR1-223ENST00000496296 RIOK2Q9BVS4 552 aaKnown RBP20.77■□□□□ 0.92
FGFR1-223ENST00000496296 C8orf33Q9H7E9 229 aaPredicted RBP20.77■□□□□ 0.92
FGFR1-223ENST00000496296 SPAG4Q9NPE6 437 aa20.77■□□□□ 0.92
FGFR1-223ENST00000496296 PFDN4Q9NQP4 134 aa20.77■□□□□ 0.92
FGFR1-223ENST00000496296 POLG2Q9UHN1 485 aa20.77■□□□□ 0.92
FGFR1-223ENST00000496296 PACSIN3Q9UKS6 424 aa20.77■□□□□ 0.92
FGFR1-223ENST00000496296 NDUFAF1Q9Y375 327 aa20.77■□□□□ 0.92
FGFR1-223ENST00000496296 PRSS21Q9Y6M0 314 aa20.77■□□□□ 0.92
FGFR1-223ENST00000496296 ATP6AP2A0A1C7CYW4 349 aa20.76■□□□□ 0.91
FGFR1-223ENST00000496296 AREL1O15033 823 aa20.76■□□□□ 0.91
FGFR1-223ENST00000496296 ATP6AP2O75787 350 aa20.76■□□□□ 0.91
FGFR1-223ENST00000496296 SLC25A14O95258 325 aaPredicted RBP20.76■□□□□ 0.91
FGFR1-223ENST00000496296 TRIM16O95361 564 aa20.76■□□□□ 0.91
FGFR1-223ENST00000496296 OR56A5P0C7T3 313 aa20.76■□□□□ 0.91
FGFR1-223ENST00000496296 PEX2P28328 305 aa20.76■□□□□ 0.91
FGFR1-223ENST00000496296 AKT1P31749 480 aa20.76■□□□□ 0.91
FGFR1-223ENST00000496296 RGS4P49798 205 aa20.76■□□□□ 0.91
FGFR1-223ENST00000496296 CAMK2GQ13555 558 aaPredicted RBP20.76■□□□□ 0.91
FGFR1-223ENST00000496296 SKIV2LQ15477 1246 aaKnown RBP20.76■□□□□ 0.91
FGFR1-223ENST00000496296 SFT2D3Q587I9 215 aa20.76■□□□□ 0.91
FGFR1-223ENST00000496296 GPRC6AQ5T6X5 926 aa20.76■□□□□ 0.91
FGFR1-223ENST00000496296 CPNE9Q8IYJ1 553 aa20.76■□□□□ 0.91
FGFR1-223ENST00000496296 MIER2Q8N344 545 aa20.76■□□□□ 0.91
FGFR1-223ENST00000496296 PCYOX1LQ8NBM8 494 aa20.76■□□□□ 0.91
FGFR1-223ENST00000496296 BHLHE22Q8NFJ8 381 aaPredicted RBP20.76■□□□□ 0.91
FGFR1-223ENST00000496296 AP2M1Q96CW1 435 aa20.76■□□□□ 0.91
FGFR1-223ENST00000496296 GPATCH1Q9BRR8 931 aaKnown RBP20.76■□□□□ 0.91
FGFR1-223ENST00000496296 VCXQ9H320 206 aa20.76■□□□□ 0.91
FGFR1-223ENST00000496296 UBE2ZQ9H832 354 aaPredicted RBP20.76■□□□□ 0.91
FGFR1-223ENST00000496296 KCNK12Q9HB15 430 aa20.76■□□□□ 0.91
FGFR1-223ENST00000496296 RIMS3Q9UJD0 308 aa20.76■□□□□ 0.91
FGFR1-223ENST00000496296 CROTQ9UKG9 612 aa20.76■□□□□ 0.91
FGFR1-223ENST00000496296 ST14Q9Y5Y6 855 aa20.76■□□□□ 0.91
FGFR1-223ENST00000496296 TICRRQ7Z2Z1 1910 aa20.76■□□□□ 0.91
FGFR1-223ENST00000496296 TCF20Q9UGU0 1960 aaKnown RBP20.76■□□□□ 0.91
FGFR1-223ENST00000496296 IGLV3-16A0A075B6K0 115 aa20.75■□□□□ 0.91
FGFR1-223ENST00000496296 ANTXRLA6NF34 631 aa20.75■□□□□ 0.91
FGFR1-223ENST00000496296 MBTPS2O43462 519 aa20.75■□□□□ 0.91
FGFR1-223ENST00000496296 IDO1P14902 403 aa20.75■□□□□ 0.91
FGFR1-223ENST00000496296 PCBP2Q15366 365 aaKnown RBP eCLIP20.75■□□□□ 0.914e-7■■□□□ 12.5
FGFR1-223ENST00000496296 TRIP10Q15642 601 aa20.75■□□□□ 0.91
FGFR1-223ENST00000496296 SPATS1Q496A3 300 aa20.75■□□□□ 0.91
FGFR1-223ENST00000496296 SAMD4BQ5PRF9 694 aaKnown RBP20.75■□□□□ 0.91
FGFR1-223ENST00000496296 LPCAT4Q643R3 524 aa20.75■□□□□ 0.91
FGFR1-223ENST00000496296 PAOXQ6QHF9 649 aa20.75■□□□□ 0.91
FGFR1-223ENST00000496296 CYP2U1Q7Z449 544 aa20.75■□□□□ 0.91
FGFR1-223ENST00000496296 ADAMTSL2Q86TH1 951 aa20.75■□□□□ 0.91
FGFR1-223ENST00000496296 SYVN1Q86TM6 617 aa20.75■□□□□ 0.91
FGFR1-223ENST00000496296 TICAM1Q8IUC6 712 aa20.75■□□□□ 0.91
FGFR1-223ENST00000496296 CATSPER1Q8NEC5 780 aa20.75■□□□□ 0.91
FGFR1-223ENST00000496296 DNASE1L2Q92874 299 aa20.75■□□□□ 0.91
FGFR1-223ENST00000496296 RSPH9Q9H1X1 276 aaPredicted RBP20.75■□□□□ 0.91
FGFR1-223ENST00000496296 ABCG8Q9H221 673 aa20.75■□□□□ 0.91
FGFR1-223ENST00000496296 SPATS2LQ9NUQ6 558 aaKnown RBP20.75■□□□□ 0.91
FGFR1-223ENST00000496296 LIMD1Q9UGP4 676 aa20.75■□□□□ 0.91
FGFR1-223ENST00000496296 ZNF225Q9UK10 706 aa20.75■□□□□ 0.91
FGFR1-223ENST00000496296 PIAS3Q9Y6X2 628 aa20.75■□□□□ 0.91
FGFR1-223ENST00000496296 E2F3O00716 465 aa20.75■□□□□ 0.91
FGFR1-223ENST00000496296 ADH1BP00325 375 aa20.75■□□□□ 0.91
FGFR1-223ENST00000496296 DGKAP23743 735 aa20.75■□□□□ 0.91
FGFR1-223ENST00000496296 GRB7Q14451 532 aa20.75■□□□□ 0.91
FGFR1-223ENST00000496296 CRY1Q16526 586 aa20.75■□□□□ 0.91
FGFR1-223ENST00000496296 TTLL9Q3SXZ7 439 aa20.75■□□□□ 0.91
FGFR1-223ENST00000496296 TMEM52BQ4KMG9 183 aa20.75■□□□□ 0.91
FGFR1-223ENST00000496296 PRMT9Q6P2P2 845 aa20.75■□□□□ 0.91
FGFR1-223ENST00000496296 SLC44A3Q8N4M1 653 aa20.75■□□□□ 0.91
FGFR1-223ENST00000496296 SPDL1Q96EA4 605 aa20.75■□□□□ 0.91
FGFR1-223ENST00000496296 CCDC97Q96F63 343 aaPredicted RBP20.75■□□□□ 0.91
FGFR1-223ENST00000496296 COQ10AQ96MF6 247 aa20.75■□□□□ 0.91
FGFR1-223ENST00000496296 KCNA7Q96RP8 456 aa20.75■□□□□ 0.91
FGFR1-223ENST00000496296 HOPXQ9BPY8 73 aaPredicted RBP20.75■□□□□ 0.91
FGFR1-223ENST00000496296 SEMA4BQ9NPR2 832 aaPredicted RBP20.75■□□□□ 0.91
FGFR1-223ENST00000496296 SLC52A3Q9NQ40 469 aa20.75■□□□□ 0.91
FGFR1-223ENST00000496296 ADA2Q9NZK5 511 aa20.75■□□□□ 0.91
FGFR1-223ENST00000496296 PLXNB3Q9ULL4 1909 aa20.74■□□□□ 0.91
FGFR1-223ENST00000496296 A0A1B0GTL3 188 aa20.74■□□□□ 0.91
FGFR1-223ENST00000496296 SPINT1O43278 529 aa20.74■□□□□ 0.91
FGFR1-223ENST00000496296 LZTS3O60299 673 aaPredicted RBP20.74■□□□□ 0.91
FGFR1-223ENST00000496296 SNX2O60749 519 aa20.74■□□□□ 0.91
FGFR1-223ENST00000496296 ATP1B2P14415 290 aaPredicted RBP20.74■□□□□ 0.91
FGFR1-223ENST00000496296 UQCRBP14927 111 aa20.74■□□□□ 0.91
FGFR1-223ENST00000496296 ITGB6P18564 788 aa20.74■□□□□ 0.91
FGFR1-223ENST00000496296 MSH3P20585 1137 aa20.74■□□□□ 0.91
FGFR1-223ENST00000496296 P2RY2P41231 377 aa20.74■□□□□ 0.91
FGFR1-223ENST00000496296 MRPS22P82650 360 aaKnown RBP20.74■□□□□ 0.91
FGFR1-223ENST00000496296 GRSF1Q12849 480 aaKnown RBP eCLIP20.74■□□□□ 0.91
FGFR1-223ENST00000496296 STARD3Q14849 445 aa20.74■□□□□ 0.91
FGFR1-223ENST00000496296 TGFBIQ15582 683 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms