RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 PIK3CGP48736 1102 aa15.97■□□□□ 0.15
CBX4-204ENST00000495122 CDKL1Q00532 357 aa15.97■□□□□ 0.15
CBX4-204ENST00000495122 GRIK2Q13002 908 aa15.97■□□□□ 0.15
CBX4-204ENST00000495122 STX5Q13190 355 aa15.97■□□□□ 0.15
CBX4-204ENST00000495122 PTPRRQ15256 657 aa15.97■□□□□ 0.15
CBX4-204ENST00000495122 USP39Q53GS9 565 aaKnown RBP15.97■□□□□ 0.15
CBX4-204ENST00000495122 NEK10Q6ZWH5 1172 aa15.97■□□□□ 0.15
CBX4-204ENST00000495122 ULK2Q8IYT8 1036 aa15.97■□□□□ 0.15
CBX4-204ENST00000495122 UCMAQ8WVF2 138 aa15.97■□□□□ 0.15
CBX4-204ENST00000495122 VPS35Q96QK1 796 aa15.97■□□□□ 0.15
CBX4-204ENST00000495122 SERPINI1Q99574 410 aa15.97■□□□□ 0.15
CBX4-204ENST00000495122 DENND2DQ9H6A0 471 aaPredicted RBP15.97■□□□□ 0.15
CBX4-204ENST00000495122 MID1IP1Q9NPA3 183 aa15.97■□□□□ 0.15
CBX4-204ENST00000495122 MRPL40Q9NQ50 206 aaKnown RBP15.97■□□□□ 0.15
CBX4-204ENST00000495122 UTP6Q9NYH9 597 aaKnown RBP15.97■□□□□ 0.15
CBX4-204ENST00000495122 GALPQ9UBC7 116 aa15.97■□□□□ 0.15
CBX4-204ENST00000495122 HCN2Q9UL51 889 aa15.97■□□□□ 0.15
CBX4-204ENST00000495122 CACNA1EQ15878 2313 aa15.97■□□□□ 0.15
CBX4-204ENST00000495122 PLXNA2O75051 1894 aa15.97■□□□□ 0.15
CBX4-204ENST00000495122 TTC34A8MYJ7 566 aa15.96■□□□□ 0.15
CBX4-204ENST00000495122 TMEM233B4DJY2 109 aa15.96■□□□□ 0.15
CBX4-204ENST00000495122 SLC16A5O15375 505 aa15.96■□□□□ 0.15
CBX4-204ENST00000495122 BNIP3LO60238 219 aa15.96■□□□□ 0.15
CBX4-204ENST00000495122 CPA2P48052 419 aa15.96■□□□□ 0.15
CBX4-204ENST00000495122 STX1BP61266 288 aa15.96■□□□□ 0.15
CBX4-204ENST00000495122 SH3BP2P78314 561 aa15.96■□□□□ 0.15
CBX4-204ENST00000495122 ELP6Q0PNE2 266 aa15.96■□□□□ 0.15
CBX4-204ENST00000495122 SP140Q13342 867 aa15.96■□□□□ 0.15
CBX4-204ENST00000495122 GBX1Q14549 363 aa15.96■□□□□ 0.15
CBX4-204ENST00000495122 PPP1R3AQ16821 1122 aa15.96■□□□□ 0.15
CBX4-204ENST00000495122 PLEKHS1Q5SXH7 462 aa15.96■□□□□ 0.15
CBX4-204ENST00000495122 SULT1C3Q6IMI6 304 aa15.96■□□□□ 0.15
CBX4-204ENST00000495122 OGFOD2Q6N063 350 aa15.96■□□□□ 0.15
CBX4-204ENST00000495122 SBSNQ6UWP8 590 aa15.96■□□□□ 0.15
CBX4-204ENST00000495122 LARP4Q71RC2 724 aaKnown RBP eCLIP15.96■□□□□ 0.15
CBX4-204ENST00000495122 ZNF765Q7L2R6 523 aa15.96■□□□□ 0.15
CBX4-204ENST00000495122 TCAIMQ8N3R3 496 aa15.96■□□□□ 0.15
CBX4-204ENST00000495122 ZNF513Q8N8E2 541 aaPredicted RBP15.96■□□□□ 0.15
CBX4-204ENST00000495122 KYQ8NBH2 561 aa15.96■□□□□ 0.15
CBX4-204ENST00000495122 KCNV2Q8TDN2 545 aa15.96■□□□□ 0.15
CBX4-204ENST00000495122 JADE3Q92613 823 aa15.96■□□□□ 0.15
CBX4-204ENST00000495122 PPP1R16AQ96I34 528 aa15.96■□□□□ 0.15
CBX4-204ENST00000495122 LENG8Q96PV6 779 aaPredicted RBP15.96■□□□□ 0.15
CBX4-204ENST00000495122 SHCBP1LQ9BZQ2 653 aa15.96■□□□□ 0.15
CBX4-204ENST00000495122 FAM83DQ9H4H8 585 aa15.96■□□□□ 0.15
CBX4-204ENST00000495122 EFCAB1Q9HAE3 211 aa15.96■□□□□ 0.15
CBX4-204ENST00000495122 SARS2Q9NP81 518 aaKnown RBP15.96■□□□□ 0.15
CBX4-204ENST00000495122 POLMQ9NP87 494 aaPredicted RBP15.96■□□□□ 0.15
CBX4-204ENST00000495122 NOP53Q9NZM5 478 aaKnown RBP15.96■□□□□ 0.15
CBX4-204ENST00000495122 BCAP29Q9UHQ4 241 aa15.96■□□□□ 0.15
CBX4-204ENST00000495122 COPG1Q9Y678 874 aaKnown RBP15.96■□□□□ 0.15
CBX4-204ENST00000495122 TBC1D3BA6NDS4 549 aa15.95■□□□□ 0.14
CBX4-204ENST00000495122 PEX11AO75192 247 aa15.95■□□□□ 0.14
CBX4-204ENST00000495122 SKAP2O75563 359 aaPredicted RBP15.95■□□□□ 0.14
CBX4-204ENST00000495122 CRCPO75575 148 aa15.95■□□□□ 0.14
CBX4-204ENST00000495122 C8GP07360 202 aa15.95■□□□□ 0.14
CBX4-204ENST00000495122 TIMP2P16035 220 aa15.95■□□□□ 0.14
CBX4-204ENST00000495122 PCSK2P16519 638 aa15.95■□□□□ 0.14
CBX4-204ENST00000495122 VCLP18206 1134 aa15.95■□□□□ 0.14
CBX4-204ENST00000495122 UGT1A6P19224 532 aa15.95■□□□□ 0.14
CBX4-204ENST00000495122 UGT1A1P22309 533 aa15.95■□□□□ 0.14
CBX4-204ENST00000495122 UGT1A4P22310 534 aa15.95■□□□□ 0.14
CBX4-204ENST00000495122 ITGB7P26010 798 aa15.95■□□□□ 0.14
CBX4-204ENST00000495122 UGT1A3P35503 534 aa15.95■□□□□ 0.14
CBX4-204ENST00000495122 UGT1A5P35504 534 aa15.95■□□□□ 0.14
CBX4-204ENST00000495122 MMP12P39900 470 aa15.95■□□□□ 0.14
CBX4-204ENST00000495122 P2RY2P41231 377 aa15.95■□□□□ 0.14
CBX4-204ENST00000495122 CREB5Q02930 508 aa15.95■□□□□ 0.14
CBX4-204ENST00000495122 GSTA3Q16772 222 aa15.95■□□□□ 0.14
CBX4-204ENST00000495122 ZNF284Q2VY69 593 aa15.95■□□□□ 0.14
CBX4-204ENST00000495122 HNRNPA1L2Q32P51 320 aaKnown RBP15.95■□□□□ 0.14
CBX4-204ENST00000495122 ATP13A5Q4VNC0 1218 aa15.95■□□□□ 0.14
CBX4-204ENST00000495122 ARSIQ5FYB1 569 aa15.95■□□□□ 0.14
CBX4-204ENST00000495122 LDLRAP1Q5SW96 308 aa15.95■□□□□ 0.14
CBX4-204ENST00000495122 TCEAL6Q6IPX3 200 aa15.95■□□□□ 0.14
CBX4-204ENST00000495122 PGM2L1Q6PCE3 622 aa15.95■□□□□ 0.14
CBX4-204ENST00000495122 CYP2U1Q7Z449 544 aa15.95■□□□□ 0.14
CBX4-204ENST00000495122 TRMT11Q7Z4G4 463 aaKnown RBP15.95■□□□□ 0.14
CBX4-204ENST00000495122 SPATA19Q7Z5L4 167 aa15.95■□□□□ 0.14
CBX4-204ENST00000495122 DSG4Q86SJ6 1040 aa15.95■□□□□ 0.14
CBX4-204ENST00000495122 DDHD1Q8NEL9 900 aa15.95■□□□□ 0.14
CBX4-204ENST00000495122 TSPEARQ8WU66 669 aa15.95■□□□□ 0.14
CBX4-204ENST00000495122 TWIST2Q8WVJ9 160 aa15.95■□□□□ 0.14
CBX4-204ENST00000495122 OR8D1Q8WZ84 308 aa15.95■□□□□ 0.14
CBX4-204ENST00000495122 STMN2Q93045 179 aa15.95■□□□□ 0.14
CBX4-204ENST00000495122 TCEAL3Q969E4 200 aa15.95■□□□□ 0.14
CBX4-204ENST00000495122 FAM136AQ96C01 138 aa15.95■□□□□ 0.14
CBX4-204ENST00000495122 MOCOSQ96EN8 888 aa15.95■□□□□ 0.14
CBX4-204ENST00000495122 DCUN1D1Q96GG9 259 aa15.95■□□□□ 0.14
CBX4-204ENST00000495122 CATSPER2Q96P56 530 aa15.95■□□□□ 0.14
CBX4-204ENST00000495122 BOCQ9BWV1 1114 aa15.95■□□□□ 0.14
CBX4-204ENST00000495122 PCDH12Q9NPG4 1184 aa15.95■□□□□ 0.14
CBX4-204ENST00000495122 RIC8BQ9NVN3 520 aa15.95■□□□□ 0.14
CBX4-204ENST00000495122 IKZF3Q9UKT9 509 aa15.95■□□□□ 0.14
CBX4-204ENST00000495122 DNAJC15Q9Y5T4 150 aa15.95■□□□□ 0.14
CBX4-204ENST00000495122 PLXNB3Q9ULL4 1909 aa15.95■□□□□ 0.14
CBX4-204ENST00000495122 MAP1BP46821 2468 aaKnown RBP15.94■□□□□ 0.14
CBX4-204ENST00000495122 KMT2BQ9UMN6 2715 aaPredicted RBP15.94■□□□□ 0.14
CBX4-204ENST00000495122 TCRBV21S2A2A0A5A6 115 aa15.94■□□□□ 0.14
CBX4-204ENST00000495122 C16orf96A6NNT2 1141 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms