RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 BTN3A1O00481 513 aa15.09■□□□□ 0.01
SDF4-207ENST00000494748 CXCR6O00574 342 aa15.09■□□□□ 0.01
SDF4-207ENST00000494748 CDKN1CP49918 316 aaPredicted RBP15.09■□□□□ 0.01
SDF4-207ENST00000494748 NKX2-5P52952 324 aaPredicted RBP15.09■□□□□ 0.01
SDF4-207ENST00000494748 CDKN2AIPNLQ96HQ2 116 aa15.09■□□□□ 0.01
SDF4-207ENST00000494748 C1orf74Q96LT6 269 aa15.09■□□□□ 0.01
SDF4-207ENST00000494748 DACH2Q96NX9 599 aa15.09■□□□□ 0.01
SDF4-207ENST00000494748 SYCE1LA8MT33 242 aa15.09■□□□□ 0.01
SDF4-207ENST00000494748 OR7A17O14581 309 aa15.09■□□□□ 0.01
SDF4-207ENST00000494748 CXCL11O14625 94 aa15.09■□□□□ 0.01
SDF4-207ENST00000494748 FTH1P02794 183 aa15.09■□□□□ 0.01
SDF4-207ENST00000494748 ZNF140P52738 457 aaPredicted RBP15.09■□□□□ 0.01
SDF4-207ENST00000494748 RAD51Q06609 339 aa15.09■□□□□ 0.01
SDF4-207ENST00000494748 SMN1Q16637 294 aaKnown RBP15.09■□□□□ 0.01
SDF4-207ENST00000494748 C18orf21Q32NC0 220 aaPredicted RBP15.09■□□□□ 0.01
SDF4-207ENST00000494748 STEAP3Q658P3 488 aa15.09■□□□□ 0.01
SDF4-207ENST00000494748 THOC7Q6I9Y2 204 aaKnown RBP15.09■□□□□ 0.01
SDF4-207ENST00000494748 ARL10Q8N8L6 244 aa15.09■□□□□ 0.01
SDF4-207ENST00000494748 OR10T2Q8NGX3 314 aa15.09■□□□□ 0.01
SDF4-207ENST00000494748 CHAC2Q8WUX2 184 aa15.09■□□□□ 0.01
SDF4-207ENST00000494748 LGALS12Q96DT0 336 aa15.09■□□□□ 0.01
SDF4-207ENST00000494748 GABARAPL1Q9H0R8 117 aa15.09■□□□□ 0.01
SDF4-207ENST00000494748 MAGIXQ9H6Y5 334 aa15.09■□□□□ 0.01
SDF4-207ENST00000494748 TMEM248Q9NWD8 314 aa15.09■□□□□ 0.01
SDF4-207ENST00000494748 PKP3Q9Y446 797 aa15.09■□□□□ 0.01
SDF4-207ENST00000494748 CENPFP49454 3210 aa15.09■□□□□ 0.01
SDF4-207ENST00000494748 E9PQ18 207 aa15.09■□□□□ 0.01
SDF4-207ENST00000494748 IFRD1O00458 451 aaPredicted RBP15.09■□□□□ 0.01
SDF4-207ENST00000494748 IL5RAQ01344 420 aa15.09■□□□□ 0.01
SDF4-207ENST00000494748 FADDQ13158 208 aa15.09■□□□□ 0.01
SDF4-207ENST00000494748 CARTPTQ16568 116 aa15.09■□□□□ 0.01
SDF4-207ENST00000494748 PAGE2Q7Z2X7 111 aa15.09■□□□□ 0.01
SDF4-207ENST00000494748 CALHM3Q86XJ0 350 aa15.09■□□□□ 0.01
SDF4-207ENST00000494748 CCDC71Q8IV32 467 aaPredicted RBP15.09■□□□□ 0.01
SDF4-207ENST00000494748 OR6J1Q8NGC5 347 aa15.09■□□□□ 0.01
SDF4-207ENST00000494748 BRSK1Q8TDC3 778 aa15.09■□□□□ 0.01
SDF4-207ENST00000494748 TRIB3Q96RU7 358 aa15.09■□□□□ 0.01
SDF4-207ENST00000494748 TAS2R13Q9NYV9 303 aa15.09■□□□□ 0.01
SDF4-207ENST00000494748 U3KQV3 271 aa15.09■□□□□ 0.01
SDF4-207ENST00000494748 PSMD11O00231 422 aa15.08■□□□□ 0.01
SDF4-207ENST00000494748 RGS13O14921 159 aa15.08■□□□□ 0.01
SDF4-207ENST00000494748 SEC24AO95486 1093 aa15.08■□□□□ 0.01
SDF4-207ENST00000494748 F2P00734 622 aa15.08■□□□□ 0.01
SDF4-207ENST00000494748 RETP07949 1114 aa15.08■□□□□ 0.01
SDF4-207ENST00000494748 NR4A2P43354 598 aa15.08■□□□□ 0.01
SDF4-207ENST00000494748 SERPINB10P48595 397 aa15.08■□□□□ 0.01
SDF4-207ENST00000494748 GTDC1Q4AE62 458 aa15.08■□□□□ 0.01
SDF4-207ENST00000494748 CARD16Q5EG05 197 aa15.08■□□□□ 0.01
SDF4-207ENST00000494748 CPZQ66K79 652 aa15.08■□□□□ 0.01
SDF4-207ENST00000494748 CD300LGQ6UXG3 332 aa15.08■□□□□ 0.01
SDF4-207ENST00000494748 MOB2Q70IA6 237 aa15.08■□□□□ 0.01
SDF4-207ENST00000494748 EID3Q8N140 333 aa15.08■□□□□ 0.01
SDF4-207ENST00000494748 PSMA8Q8TAA3 256 aa15.08■□□□□ 0.01
SDF4-207ENST00000494748 SLC13A3Q8WWT9 602 aa15.08■□□□□ 0.01
SDF4-207ENST00000494748 SLC39A13Q96H72 371 aa15.08■□□□□ 0.01
SDF4-207ENST00000494748 RIMKLBQ9ULI2 386 aa15.08■□□□□ 0.01
SDF4-207ENST00000494748 TRPM7Q96QT4 1865 aa15.08■□□□□ 0
SDF4-207ENST00000494748 OR2A25A4D2G3 310 aa15.08■□□□□ 0
SDF4-207ENST00000494748 AREL1O15033 823 aa15.08■□□□□ 0
SDF4-207ENST00000494748 TREHO43280 583 aa15.08■□□□□ 0
SDF4-207ENST00000494748 GMNNO75496 209 aa15.08■□□□□ 0
SDF4-207ENST00000494748 CAPN1P07384 714 aa15.08■□□□□ 0
SDF4-207ENST00000494748 MAGEA2P43356 314 aa15.08■□□□□ 0
SDF4-207ENST00000494748 PTGR1Q14914 329 aa15.08■□□□□ 0
SDF4-207ENST00000494748 ABRAXAS2Q15018 415 aa15.08■□□□□ 0
SDF4-207ENST00000494748 CEP68Q76N32 757 aa15.08■□□□□ 0
SDF4-207ENST00000494748 GALNT5Q7Z7M9 940 aa15.08■□□□□ 0
SDF4-207ENST00000494748 ADHFE1Q8IWW8 467 aa15.08■□□□□ 0
SDF4-207ENST00000494748 NETO1Q8TDF5 533 aa15.08■□□□□ 0
SDF4-207ENST00000494748 HTRA1Q92743 480 aa15.08■□□□□ 0
SDF4-207ENST00000494748 UGT2A1Q9Y4X1 527 aa15.08■□□□□ 0
SDF4-207ENST00000494748 SPO11Q9Y5K1 396 aa15.08■□□□□ 0
SDF4-207ENST00000494748 UBA6A0AVT1 1052 aaPredicted RBP15.08■□□□□ 0
SDF4-207ENST00000494748 ELOVL7A1L3X0 281 aa15.08■□□□□ 0
SDF4-207ENST00000494748 HOXB9P17482 250 aaPredicted RBP15.08■□□□□ 0
SDF4-207ENST00000494748 DAPP51397 102 aa15.08■□□□□ 0
SDF4-207ENST00000494748 CXCR4P61073 352 aa15.08■□□□□ 0
SDF4-207ENST00000494748 DGCR6Q14129 220 aa15.08■□□□□ 0
SDF4-207ENST00000494748 TRIP4Q15650 581 aaPredicted RBP15.08■□□□□ 0
SDF4-207ENST00000494748 CLPPQ16740 277 aaPredicted RBP15.08■□□□□ 0
SDF4-207ENST00000494748 RUNDC3AQ59EK9 446 aa15.08■□□□□ 0
SDF4-207ENST00000494748 CTSL3PQ5NE16 218 aa15.08■□□□□ 0
SDF4-207ENST00000494748 SHQ1Q6PI26 577 aaKnown RBP15.08■□□□□ 0
SDF4-207ENST00000494748 FAM83FQ8NEG4 500 aaPredicted RBP15.08■□□□□ 0
SDF4-207ENST00000494748 C17orf50Q8WW18 174 aa15.08■□□□□ 0
SDF4-207ENST00000494748 SEMA3CQ99985 751 aa15.08■□□□□ 0
SDF4-207ENST00000494748 TNKS2Q9H2K2 1166 aa15.08■□□□□ 0
SDF4-207ENST00000494748 ISPDA4D126 451 aa15.07■□□□□ 0
SDF4-207ENST00000494748 RFPL2O75678 378 aa15.07■□□□□ 0
SDF4-207ENST00000494748 SCELO95171 688 aa15.07■□□□□ 0
SDF4-207ENST00000494748 FGF1P05230 155 aa15.07■□□□□ 0
SDF4-207ENST00000494748 IL1RNP18510 177 aa15.07■□□□□ 0
SDF4-207ENST00000494748 HOXA9P31269 272 aa15.07■□□□□ 0
SDF4-207ENST00000494748 PCYT1AP49585 367 aa15.07■□□□□ 0
SDF4-207ENST00000494748 AKAP14Q86UN6 197 aa15.07■□□□□ 0
SDF4-207ENST00000494748 PHACTR4Q8IZ21 702 aa15.07■□□□□ 0
SDF4-207ENST00000494748 CLIP4Q8N3C7 705 aa15.07■□□□□ 0
SDF4-207ENST00000494748 SIDT2Q8NBJ9 832 aaKnown RBP15.07■□□□□ 0
SDF4-207ENST00000494748 EEF1AKMT1Q8WVE0 214 aa15.07■□□□□ 0
SDF4-207ENST00000494748 GAD1Q99259 594 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms