RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 GPAMQ9HCL2 828 aa14.23□□□□□ -0.13
BRCA1-223ENST00000494123 POT1Q9NUX5 634 aa14.23□□□□□ -0.13
BRCA1-223ENST00000494123 ZNF624Q9P2J8 865 aaPredicted RBP14.23□□□□□ -0.13
BRCA1-223ENST00000494123 CPNE7Q9UBL6 633 aa14.23□□□□□ -0.13
BRCA1-223ENST00000494123 PLAAQ9Y263 795 aa14.23□□□□□ -0.13
BRCA1-223ENST00000494123 ASF1AQ9Y294 204 aa14.23□□□□□ -0.13
BRCA1-223ENST00000494123 COLEC10Q9Y6Z7 277 aa14.23□□□□□ -0.13
BRCA1-223ENST00000494123 IQANK1A0A1B0GTG1 560 aa14.22□□□□□ -0.13
BRCA1-223ENST00000494123 RHPN2P1A8MT19 583 aa14.22□□□□□ -0.13
BRCA1-223ENST00000494123 EIF3FO00303 357 aaPredicted RBP14.22□□□□□ -0.13
BRCA1-223ENST00000494123 PHGDHO43175 533 aaKnown RBP14.22□□□□□ -0.13
BRCA1-223ENST00000494123 RPN2P04844 631 aa14.22□□□□□ -0.13
BRCA1-223ENST00000494123 SNRPAP09012 282 aaKnown RBP14.22□□□□□ -0.13
BRCA1-223ENST00000494123 CKMT1AP12532 417 aa14.22□□□□□ -0.13
BRCA1-223ENST00000494123 GCAP28676 217 aa14.22□□□□□ -0.13
BRCA1-223ENST00000494123 SLC19A1P41440 591 aa14.22□□□□□ -0.13
BRCA1-223ENST00000494123 SLCO1A2P46721 670 aa14.22□□□□□ -0.13
BRCA1-223ENST00000494123 SERPINB8P50452 374 aa14.22□□□□□ -0.13
BRCA1-223ENST00000494123 GBX1Q14549 363 aa14.22□□□□□ -0.13
BRCA1-223ENST00000494123 DUS1LQ6P1R4 473 aaKnown RBP14.22□□□□□ -0.13
BRCA1-223ENST00000494123 PIP4P1Q86T03 277 aa14.22□□□□□ -0.13
BRCA1-223ENST00000494123 C17orf82Q86X59 251 aaPredicted RBP14.22□□□□□ -0.13
BRCA1-223ENST00000494123 CEP97Q8IW35 865 aa14.22□□□□□ -0.13
BRCA1-223ENST00000494123 CNPY4Q8N129 248 aa14.22□□□□□ -0.13
BRCA1-223ENST00000494123 MYO1HQ8N1T3 1032 aa14.22□□□□□ -0.13
BRCA1-223ENST00000494123 NKAPQ8N5F7 415 aaKnown RBP14.22□□□□□ -0.13
BRCA1-223ENST00000494123 OR6C4Q8NGE1 309 aa14.22□□□□□ -0.13
BRCA1-223ENST00000494123 EPS8L3Q8TE67 593 aaKnown RBP14.22□□□□□ -0.13
BRCA1-223ENST00000494123 LINGO1Q96FE5 620 aa14.22□□□□□ -0.13
BRCA1-223ENST00000494123 FERD3LQ96RJ6 166 aa14.22□□□□□ -0.13
BRCA1-223ENST00000494123 LRIT1Q9P2V4 623 aa14.22□□□□□ -0.13
BRCA1-223ENST00000494123 TBK1Q9UHD2 729 aa14.22□□□□□ -0.13
BRCA1-223ENST00000494123 GOLGA4Q13439 2230 aaKnown RBP14.21□□□□□ -0.13
BRCA1-223ENST00000494123 DNAH14Q0VDD8 3507 aa14.21□□□□□ -0.13
BRCA1-223ENST00000494123 TRIM49D1C9J1S8 452 aa14.21□□□□□ -0.13
BRCA1-223ENST00000494123 SLC30A4O14863 429 aa14.21□□□□□ -0.13
BRCA1-223ENST00000494123 CBFA2T3O75081 653 aa14.21□□□□□ -0.13
BRCA1-223ENST00000494123 MPC1LP0DKB6 136 aa14.21□□□□□ -0.13
BRCA1-223ENST00000494123 GLB1P16278 677 aa14.21□□□□□ -0.13
BRCA1-223ENST00000494123 ZNF37AP17032 561 aaPredicted RBP14.21□□□□□ -0.13
BRCA1-223ENST00000494123 CKMT2P17540 419 aa14.21□□□□□ -0.13
BRCA1-223ENST00000494123 SDHBP21912 280 aa14.21□□□□□ -0.13
BRCA1-223ENST00000494123 ACADLP28330 430 aa14.21□□□□□ -0.13
BRCA1-223ENST00000494123 NDUFS1P28331 727 aa14.21□□□□□ -0.13
BRCA1-223ENST00000494123 CRABP2P29373 138 aa14.21□□□□□ -0.13
BRCA1-223ENST00000494123 TYK2P29597 1187 aa14.21□□□□□ -0.13
BRCA1-223ENST00000494123 FASLGP48023 281 aa14.21□□□□□ -0.13
BRCA1-223ENST00000494123 BEND6Q5SZJ8 279 aaPredicted RBP14.21□□□□□ -0.13
BRCA1-223ENST00000494123 NEK10Q6ZWH5 1172 aa14.21□□□□□ -0.13
BRCA1-223ENST00000494123 PIWIL4Q7Z3Z4 852 aaKnown RBP14.21□□□□□ -0.13
BRCA1-223ENST00000494123 CMC1Q7Z7K0 106 aa14.21□□□□□ -0.13
BRCA1-223ENST00000494123 RBM12BQ8IXT5 1001 aaKnown RBP14.21□□□□□ -0.13
BRCA1-223ENST00000494123 DEFB124Q8NES8 71 aa14.21□□□□□ -0.13
BRCA1-223ENST00000494123 BAHD1Q8TBE0 780 aaPredicted RBP14.21□□□□□ -0.13
BRCA1-223ENST00000494123 EEF1AKMT1Q8WVE0 214 aa14.21□□□□□ -0.13
BRCA1-223ENST00000494123 NAT6Q93015 286 aa14.21□□□□□ -0.13
BRCA1-223ENST00000494123 SH3KBP1Q96B97 665 aa14.21□□□□□ -0.13
BRCA1-223ENST00000494123 MTBPQ96DY7 904 aa14.21□□□□□ -0.13
BRCA1-223ENST00000494123 TRIT1Q9H3H1 467 aaKnown RBP14.21□□□□□ -0.13
BRCA1-223ENST00000494123 SNX15Q9NRS6 342 aa14.21□□□□□ -0.13
BRCA1-223ENST00000494123 TLK1Q9UKI8 766 aa14.21□□□□□ -0.13
BRCA1-223ENST00000494123 TLDC2A0PJX2 215 aa14.2□□□□□ -0.14
BRCA1-223ENST00000494123 HMX2A2RU54 273 aa14.2□□□□□ -0.14
BRCA1-223ENST00000494123 RASGRF2O14827 1237 aa14.2□□□□□ -0.14
BRCA1-223ENST00000494123 TNFSF14O43557 240 aa14.2□□□□□ -0.14
BRCA1-223ENST00000494123 NUDT21O43809 227 aaKnown RBP14.2□□□□□ -0.14
BRCA1-223ENST00000494123 CDH16O75309 829 aa14.2□□□□□ -0.14
BRCA1-223ENST00000494123 MAPK9P45984 424 aa14.2□□□□□ -0.14
BRCA1-223ENST00000494123 PPM1FP49593 454 aaPredicted RBP14.2□□□□□ -0.14
BRCA1-223ENST00000494123 UBE2IP63279 158 aaKnown RBP14.2□□□□□ -0.14
BRCA1-223ENST00000494123 DNAJC3Q13217 504 aa14.2□□□□□ -0.14
BRCA1-223ENST00000494123 ZKSCAN8Q15776 578 aaPredicted RBP14.2□□□□□ -0.14
BRCA1-223ENST00000494123 RSPO4Q2I0M5 234 aaPredicted RBP14.2□□□□□ -0.14
BRCA1-223ENST00000494123 TAF1BQ53T94 588 aaPredicted RBP14.2□□□□□ -0.14
BRCA1-223ENST00000494123 GUSBP11Q6P575 273 aa14.2□□□□□ -0.14
BRCA1-223ENST00000494123 TTC23LQ6PF05 361 aa14.2□□□□□ -0.14
BRCA1-223ENST00000494123 UNC5DQ6UXZ4 953 aa14.2□□□□□ -0.14
BRCA1-223ENST00000494123 EFL1Q7Z2Z2 1120 aaKnown RBP14.2□□□□□ -0.14
BRCA1-223ENST00000494123 SPNS2Q8IVW8 549 aa14.2□□□□□ -0.14
BRCA1-223ENST00000494123 PHC3Q8NDX5 983 aa14.2□□□□□ -0.14
BRCA1-223ENST00000494123 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.2□□□□□ -0.14
BRCA1-223ENST00000494123 MVB12BQ9H7P6 319 aa14.2□□□□□ -0.14
BRCA1-223ENST00000494123 RUVBL2Q9Y230 463 aaKnown RBP14.2□□□□□ -0.14
BRCA1-223ENST00000494123 NFS1Q9Y697 457 aa14.2□□□□□ -0.14
BRCA1-223ENST00000494123 RNF215Q9Y6U7 377 aa14.2□□□□□ -0.14
BRCA1-223ENST00000494123 UQCRHLA0A096LP55 91 aa14.19□□□□□ -0.14
BRCA1-223ENST00000494123 LY6G6EA0A0G2JKS1 128 aa14.19□□□□□ -0.14
BRCA1-223ENST00000494123 EME2A4GXA9 379 aaPredicted RBP14.19□□□□□ -0.14
BRCA1-223ENST00000494123 PPM1DO15297 605 aa14.19□□□□□ -0.14
BRCA1-223ENST00000494123 ZW10O43264 779 aa14.19□□□□□ -0.14
BRCA1-223ENST00000494123 KDM1AO60341 852 aa14.19□□□□□ -0.14
BRCA1-223ENST00000494123 TCEA3O75764 348 aa14.19□□□□□ -0.14
BRCA1-223ENST00000494123 UQCRHP07919 91 aa14.19□□□□□ -0.14
BRCA1-223ENST00000494123 CSRP1P21291 193 aaKnown RBP14.19□□□□□ -0.14
BRCA1-223ENST00000494123 PLCL1Q15111 1095 aa14.19□□□□□ -0.14
BRCA1-223ENST00000494123 TRIP6Q15654 476 aaKnown RBP14.19□□□□□ -0.14
BRCA1-223ENST00000494123 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.19□□□□□ -0.14
BRCA1-223ENST00000494123 TBC1D1Q86TI0 1168 aaPredicted RBP14.19□□□□□ -0.14
BRCA1-223ENST00000494123 TDRPQ86YL5 185 aa14.19□□□□□ -0.14
BRCA1-223ENST00000494123 TBC1D21Q8IYX1 336 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms