RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 UFM1P61960 85 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 CSNK2BP67870 215 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 SP140Q13342 867 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 CAPRIN1Q14444 709 aaKnown RBP11.28□□□□□ -0.6
RFC4-214ENST00000494047 RAB39AQ14964 217 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 VEPH1Q14D04 833 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 MAPKAPK3Q16644 382 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 IMPG1Q17R60 797 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 TCTN1Q2MV58 587 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 CLLU1OSQ5K130 101 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 CTSL3PQ5NE16 218 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 ARMC12Q5T9G4 340 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 TPGS2Q68CL5 300 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 NADSYN1Q6IA69 706 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 GRAMD4Q6IC98 578 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 RETSATQ6NUM9 610 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 FUT10Q6P4F1 479 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 NCEH1Q6PIU2 408 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 LRRC70Q7Z2Q7 622 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 MILR1Q7Z6M3 343 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 ZNF554Q86TJ5 538 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 ZCCHC7Q8N3Z6 543 aaKnown RBP11.28□□□□□ -0.6
RFC4-214ENST00000494047 ZNF557Q8N988 423 aaPredicted RBP11.28□□□□□ -0.6
RFC4-214ENST00000494047 DCAF4L2Q8NA75 395 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 OR13F1Q8NGS4 319 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 OR5K1Q8NHB7 308 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 MAGEE2Q8TD90 523 aaPredicted RBP11.28□□□□□ -0.6
RFC4-214ENST00000494047 S100ZQ8WXG8 99 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 MYLIPQ8WY64 445 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 ACDQ96AP0 544 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 ULK4Q96C45 1275 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 TTPALQ9BTX7 342 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 GPR63Q9BZJ6 419 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 DPY30Q9C005 99 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 RPF2Q9H7B2 306 aaKnown RBP11.28□□□□□ -0.6
RFC4-214ENST00000494047 POLR1BQ9H9Y6 1135 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 FAIMQ9NVQ4 179 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 CORO2BQ9UQ03 480 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 MAN2B2Q9Y2E5 1009 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 PCDHB7Q9Y5E2 793 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 ZFP37Q9Y6Q3 630 aaPredicted RBP11.28□□□□□ -0.6
RFC4-214ENST00000494047 COL4A6Q14031 1691 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.28□□□□□ -0.6
RFC4-214ENST00000494047 G3V2T6 193 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 H3BMQ9 156 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 H3BNC9 293 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 K7EPI3 171 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 QSOX1O00391 747 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 ENPP3O14638 875 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 MUSKO15146 869 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 DPM1O60762 260 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 ULK1O75385 1050 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 RSL1D1O76021 490 aaKnown RBP11.28□□□□□ -0.6
RFC4-214ENST00000494047 OR4F21O95013 312 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 MT-CO1P00395 513 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 CAPN1P07384 714 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 ITGAMP11215 1152 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 MYOGP15173 224 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 EPB42P16452 691 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 TSPAN8P19075 237 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 RYKP34925 604 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 ARL1P40616 181 aaPredicted RBP11.28□□□□□ -0.6
RFC4-214ENST00000494047 ZFP36L2P47974 494 aaKnown RBP11.28□□□□□ -0.6
RFC4-214ENST00000494047 CYP4F3Q08477 520 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 SFSWAPQ12872 951 aaKnown RBP11.28□□□□□ -0.6
RFC4-214ENST00000494047 AP5B1Q2VPB7 878 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 SETMARQ53H47 684 aaPredicted RBP11.28□□□□□ -0.6
RFC4-214ENST00000494047 RABL3Q5HYI8 236 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 PAGE3Q5JUK9 113 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 C10orf62Q5T681 223 aaPredicted RBP11.28□□□□□ -0.6
RFC4-214ENST00000494047 SLC8B1Q6J4K2 584 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 FAM117BQ6P1L5 589 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 DLEU7Q6UYE1 221 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.28□□□□□ -0.63e-11■□□□□ 10.5
RFC4-214ENST00000494047 MACC1Q6ZN28 852 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 KCTD8Q6ZWB6 473 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 RPS27LQ71UM5 84 aaKnown RBP11.28□□□□□ -0.6
RFC4-214ENST00000494047 GOLGA7Q7Z5G4 137 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 IFNEQ86WN2 208 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 PGBD3Q8N328 593 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 CDYL2Q8N8U2 506 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 SMYD1Q8NB12 490 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 MDGA1Q8NFP4 955 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 MAFAQ8NHW3 353 aaPredicted RBP11.28□□□□□ -0.6
RFC4-214ENST00000494047 SP7Q8TDD2 431 aaPredicted RBP11.28□□□□□ -0.6
RFC4-214ENST00000494047 CSGALNACT1Q8TDX6 532 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 TRUB1Q8WWH5 349 aaKnown RBP11.28□□□□□ -0.6
RFC4-214ENST00000494047 ITPKCQ96DU7 683 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 MYO19Q96H55 970 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 COG8Q96MW5 612 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 KCNA7Q96RP8 456 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 YME1L1Q96TA2 773 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 C17orf80Q9BSJ5 609 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 SPON2Q9BUD6 331 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 C2orf49Q9BVC5 232 aaPredicted RBP11.28□□□□□ -0.6
RFC4-214ENST00000494047 WDR12Q9GZL7 423 aaKnown RBP11.28□□□□□ -0.6
RFC4-214ENST00000494047 GABARAPL1Q9H0R8 117 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 MUC3BQ9H195 1237 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 KCNH6Q9H252 994 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 LMCD1Q9NZU5 365 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms