RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 SLC35E2BP0CK96 405 aa11.29□□□□□ -0.6
LSM2-214ENST00000493387 XRCC1P18887 633 aaPredicted RBP11.29□□□□□ -0.6
LSM2-214ENST00000493387 PDHA2P29803 388 aa11.29□□□□□ -0.6
LSM2-214ENST00000493387 CCNFP41002 786 aa11.29□□□□□ -0.6
LSM2-214ENST00000493387 CSRP3P50461 194 aa11.29□□□□□ -0.6
LSM2-214ENST00000493387 DUSP3P51452 185 aaPredicted RBP11.29□□□□□ -0.6
LSM2-214ENST00000493387 KPNA2P52292 529 aaKnown RBP11.29□□□□□ -0.6
LSM2-214ENST00000493387 LIMK1P53667 647 aa11.29□□□□□ -0.6
LSM2-214ENST00000493387 BIRC2Q13490 618 aa11.29□□□□□ -0.6
LSM2-214ENST00000493387 KRT33BQ14525 404 aa11.29□□□□□ -0.6
LSM2-214ENST00000493387 TCEA2Q15560 299 aa11.29□□□□□ -0.6
LSM2-214ENST00000493387 SEPT7Q16181 437 aaKnown RBP11.29□□□□□ -0.6
LSM2-214ENST00000493387 RPE65Q16518 533 aa11.29□□□□□ -0.6
LSM2-214ENST00000493387 FAM83EQ2M2I3 478 aa11.29□□□□□ -0.6
LSM2-214ENST00000493387 KLC3Q6P597 504 aa11.29□□□□□ -0.6
LSM2-214ENST00000493387 XKR5Q6UX68 686 aa11.29□□□□□ -0.6
LSM2-214ENST00000493387 NAPRTQ6XQN6 538 aa11.29□□□□□ -0.6
LSM2-214ENST00000493387 CMC1Q7Z7K0 106 aa11.29□□□□□ -0.6
LSM2-214ENST00000493387 GATAD2AQ86YP4 633 aa11.29□□□□□ -0.6
LSM2-214ENST00000493387 TRIM48Q8IWZ4 208 aa11.29□□□□□ -0.6
LSM2-214ENST00000493387 SFRP1Q8N474 314 aa11.29□□□□□ -0.6
LSM2-214ENST00000493387 ARL10Q8N8L6 244 aa11.29□□□□□ -0.6
LSM2-214ENST00000493387 OR2I1PQ8NGU4 316 aa11.29□□□□□ -0.6
LSM2-214ENST00000493387 MAPK15Q8TD08 544 aa11.29□□□□□ -0.6
LSM2-214ENST00000493387 EEF1AKMT1Q8WVE0 214 aa11.29□□□□□ -0.6
LSM2-214ENST00000493387 SH3KBP1Q96B97 665 aa11.29□□□□□ -0.6
LSM2-214ENST00000493387 CXorf40BQ96DE9 158 aa11.29□□□□□ -0.6
LSM2-214ENST00000493387 LINGO1Q96FE5 620 aa11.29□□□□□ -0.6
LSM2-214ENST00000493387 PGM2Q96G03 612 aa11.29□□□□□ -0.6
LSM2-214ENST00000493387 RMDN2Q96LZ7 410 aa11.29□□□□□ -0.6
LSM2-214ENST00000493387 C12orf66Q96MD2 445 aa11.29□□□□□ -0.6
LSM2-214ENST00000493387 SLC30A3Q99726 388 aa11.29□□□□□ -0.6
LSM2-214ENST00000493387 VPS11Q9H270 941 aa11.29□□□□□ -0.6
LSM2-214ENST00000493387 POT1Q9NUX5 634 aa11.29□□□□□ -0.6
LSM2-214ENST00000493387 CTNNAL1Q9UBT7 734 aa11.29□□□□□ -0.6
LSM2-214ENST00000493387 POLG2Q9UHN1 485 aa11.29□□□□□ -0.6
LSM2-214ENST00000493387 PSMD13Q9UNM6 376 aa11.29□□□□□ -0.6
LSM2-214ENST00000493387 WDR37Q9Y2I8 494 aa11.29□□□□□ -0.6
LSM2-214ENST00000493387 PABPN1LA6NDY0 278 aaKnown RBP11.28□□□□□ -0.6
LSM2-214ENST00000493387 B4DGG1 531 aa11.28□□□□□ -0.6
LSM2-214ENST00000493387 ZW10O43264 779 aa11.28□□□□□ -0.6
LSM2-214ENST00000493387 ATP8B1O43520 1251 aa11.28□□□□□ -0.6
LSM2-214ENST00000493387 ZBTB14O43829 449 aa11.28□□□□□ -0.6
LSM2-214ENST00000493387 OPA1O60313 960 aa11.28□□□□□ -0.6
LSM2-214ENST00000493387 NOBOXO60393 691 aa11.28□□□□□ -0.6
LSM2-214ENST00000493387 GFRA3O60609 400 aa11.28□□□□□ -0.6
LSM2-214ENST00000493387 RFPL1O75677 317 aa11.28□□□□□ -0.6
LSM2-214ENST00000493387 MATN4O95460 622 aa11.28□□□□□ -0.6
LSM2-214ENST00000493387 TSPAN12O95859 305 aa11.28□□□□□ -0.6
LSM2-214ENST00000493387 VIPP01282 170 aa11.28□□□□□ -0.6
LSM2-214ENST00000493387 CATP04040 527 aaKnown RBP11.28□□□□□ -0.6
LSM2-214ENST00000493387 LTA4HP09960 611 aaKnown RBP11.28□□□□□ -0.6
LSM2-214ENST00000493387 CCDC166P0CW27 439 aa11.28□□□□□ -0.6
LSM2-214ENST00000493387 GIMD1P0DJR0 217 aa11.28□□□□□ -0.6
LSM2-214ENST00000493387 MTHFD1P11586 935 aaKnown RBP11.28□□□□□ -0.6
LSM2-214ENST00000493387 BRAFP15056 766 aa11.28□□□□□ -0.6
LSM2-214ENST00000493387 MAP4P27816 1152 aaKnown RBP11.28□□□□□ -0.6
LSM2-214ENST00000493387 ABRQ12979 859 aa11.28□□□□□ -0.6
LSM2-214ENST00000493387 SP140Q13342 867 aa11.28□□□□□ -0.6
LSM2-214ENST00000493387 CLCA4Q14CN2 919 aa11.28□□□□□ -0.6
LSM2-214ENST00000493387 NR0B2Q15466 257 aa11.28□□□□□ -0.6
LSM2-214ENST00000493387 TSNAXIP1Q2TAA8 658 aa11.28□□□□□ -0.6
LSM2-214ENST00000493387 C14orf28Q4W4Y0 310 aa11.28□□□□□ -0.6
LSM2-214ENST00000493387 TMEM207Q6UWW9 146 aa11.28□□□□□ -0.6
LSM2-214ENST00000493387 CYHR1Q6ZMK1 362 aa11.28□□□□□ -0.6
LSM2-214ENST00000493387 C17orf82Q86X59 251 aaPredicted RBP11.28□□□□□ -0.6
LSM2-214ENST00000493387 VRK3Q8IV63 474 aa11.28□□□□□ -0.6
LSM2-214ENST00000493387 TBC1D21Q8IYX1 336 aa11.28□□□□□ -0.6
LSM2-214ENST00000493387 NAGSQ8N159 534 aa11.28□□□□□ -0.6
LSM2-214ENST00000493387 EID2Q8N6I1 236 aa11.28□□□□□ -0.6
LSM2-214ENST00000493387 GOLGA6L1Q8N7Z2 621 aa11.28□□□□□ -0.6
LSM2-214ENST00000493387 FBXO15Q8NCQ5 510 aaPredicted RBP11.28□□□□□ -0.6
LSM2-214ENST00000493387 GPR156Q8NFN8 814 aa11.28□□□□□ -0.6
LSM2-214ENST00000493387 MZB1Q8WU39 189 aa11.28□□□□□ -0.6
LSM2-214ENST00000493387 ASB11Q8WXH4 323 aa11.28□□□□□ -0.6
LSM2-214ENST00000493387 ALKBH8Q96BT7 664 aaKnown RBP11.28□□□□□ -0.6
LSM2-214ENST00000493387 UBXN10Q96LJ8 280 aa11.28□□□□□ -0.6
LSM2-214ENST00000493387 INSM2Q96T92 566 aaPredicted RBP11.28□□□□□ -0.6
LSM2-214ENST00000493387 PHOX2BQ99453 314 aa11.28□□□□□ -0.6
LSM2-214ENST00000493387 TRIM54Q9BYV2 358 aa11.28□□□□□ -0.6
LSM2-214ENST00000493387 TRIT1Q9H3H1 467 aaKnown RBP11.28□□□□□ -0.6
LSM2-214ENST00000493387 UCK1Q9HA47 277 aa11.28□□□□□ -0.6
LSM2-214ENST00000493387 IMP3Q9NV31 184 aaKnown RBP11.28□□□□□ -0.6
LSM2-214ENST00000493387 CPNE7Q9UBL6 633 aa11.28□□□□□ -0.6
LSM2-214ENST00000493387 DCDC2Q9UHG0 476 aa11.28□□□□□ -0.6
LSM2-214ENST00000493387 NOVA2Q9UNW9 492 aaKnown RBP11.28□□□□□ -0.6
LSM2-214ENST00000493387 ASF1AQ9Y294 204 aa11.28□□□□□ -0.6
LSM2-214ENST00000493387 ARHGEF17Q96PE2 2063 aaPredicted RBP11.28□□□□□ -0.6
LSM2-214ENST00000493387 TMEM131Q92545 1883 aa11.27□□□□□ -0.6
LSM2-214ENST00000493387 ADAMTS9Q9P2N4 1935 aa11.27□□□□□ -0.6
LSM2-214ENST00000493387 ZFC3H1O60293 1989 aaKnown RBP11.27□□□□□ -0.61
LSM2-214ENST00000493387 TP53BP1Q12888 1972 aaPredicted RBP11.27□□□□□ -0.61
LSM2-214ENST00000493387 C4orf47A7E2U8 309 aa11.27□□□□□ -0.61
LSM2-214ENST00000493387 GFYI3L273 518 aa11.27□□□□□ -0.61
LSM2-214ENST00000493387 TRIM38O00635 465 aa11.27□□□□□ -0.61
LSM2-214ENST00000493387 MAP2K7O14733 419 aa11.27□□□□□ -0.61
LSM2-214ENST00000493387 SIGLEC6O43699 453 aa11.27□□□□□ -0.61
LSM2-214ENST00000493387 PSIP1O75475 530 aaKnown RBP11.27□□□□□ -0.61
LSM2-214ENST00000493387 KLHL2O95198 593 aa11.27□□□□□ -0.61
LSM2-214ENST00000493387 EML2O95834 649 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms