RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 SNRNP200O75643 2136 aaKnown RBP12.46□□□□□ -0.41
CLIP2-209ENST00000493166 ANKRD12Q6UB98 2062 aa12.46□□□□□ -0.41
CLIP2-209ENST00000493166 ESYT3A0FGR9 886 aa12.46□□□□□ -0.41
CLIP2-209ENST00000493166 TMEM8BA6NDV4 472 aa12.46□□□□□ -0.41
CLIP2-209ENST00000493166 BHMG1C9JSJ3 638 aaPredicted RBP12.46□□□□□ -0.41
CLIP2-209ENST00000493166 AGRPO00253 132 aa12.46□□□□□ -0.41
CLIP2-209ENST00000493166 EIF3HO15372 352 aaKnown RBP eCLIP12.46□□□□□ -0.41
CLIP2-209ENST00000493166 NIPSNAP2O75323 286 aa12.46□□□□□ -0.41
CLIP2-209ENST00000493166 GPC4O75487 556 aa12.46□□□□□ -0.41
CLIP2-209ENST00000493166 MPOP05164 745 aa12.46□□□□□ -0.41
CLIP2-209ENST00000493166 THRAP10827 490 aa12.46□□□□□ -0.41
CLIP2-209ENST00000493166 PKMP14618 531 aaKnown RBP12.46□□□□□ -0.41
CLIP2-209ENST00000493166 CHRM3P20309 590 aa12.46□□□□□ -0.41
CLIP2-209ENST00000493166 GUCY2DQ02846 1103 aa12.46□□□□□ -0.41
CLIP2-209ENST00000493166 CYP4F3Q08477 520 aa12.46□□□□□ -0.41
CLIP2-209ENST00000493166 CBLBQ13191 982 aa12.46□□□□□ -0.41
CLIP2-209ENST00000493166 EIF3IQ13347 325 aaKnown RBP12.46□□□□□ -0.41
CLIP2-209ENST00000493166 RTP5Q14D33 572 aa12.46□□□□□ -0.41
CLIP2-209ENST00000493166 SNAP47Q5SQN1 464 aa12.46□□□□□ -0.41
CLIP2-209ENST00000493166 TRMT10BQ6PF06 316 aaKnown RBP12.46□□□□□ -0.41
CLIP2-209ENST00000493166 KLHL35Q6PF15 583 aa12.46□□□□□ -0.41
CLIP2-209ENST00000493166 RAB11FIP2Q7L804 512 aa12.46□□□□□ -0.41
CLIP2-209ENST00000493166 CCDC25Q86WR0 208 aa12.46□□□□□ -0.41
CLIP2-209ENST00000493166 PLXDC1Q8IUK5 500 aa12.46□□□□□ -0.41
CLIP2-209ENST00000493166 SLC22A15Q8IZD6 547 aa12.46□□□□□ -0.41
CLIP2-209ENST00000493166 FBXO39Q8N4B4 442 aa12.46□□□□□ -0.41
CLIP2-209ENST00000493166 C2CD4AQ8NCU7 369 aaPredicted RBP12.46□□□□□ -0.41
CLIP2-209ENST00000493166 RCBTB1Q8NDN9 531 aa12.46□□□□□ -0.41
CLIP2-209ENST00000493166 PHC3Q8NDX5 983 aa12.46□□□□□ -0.41
CLIP2-209ENST00000493166 ACVR1CQ8NER5 493 aa12.46□□□□□ -0.41
CLIP2-209ENST00000493166 MDM1Q8TC05 714 aa12.46□□□□□ -0.41
CLIP2-209ENST00000493166 FBXO25Q8TCJ0 367 aa12.46□□□□□ -0.41
CLIP2-209ENST00000493166 PYROXD1Q8WU10 500 aa12.46□□□□□ -0.41
CLIP2-209ENST00000493166 RSC1A1Q92681 617 aa12.46□□□□□ -0.41
CLIP2-209ENST00000493166 FAM136AQ96C01 138 aa12.46□□□□□ -0.41
CLIP2-209ENST00000493166 CMKLR1Q99788 373 aa12.46□□□□□ -0.41
CLIP2-209ENST00000493166 HGH1Q9BTY7 390 aa12.46□□□□□ -0.41
CLIP2-209ENST00000493166 TRIT1Q9H3H1 467 aaKnown RBP12.46□□□□□ -0.41
CLIP2-209ENST00000493166 POLR1BQ9H9Y6 1135 aa12.46□□□□□ -0.41
CLIP2-209ENST00000493166 PLAC1Q9HBJ0 212 aa12.46□□□□□ -0.41
CLIP2-209ENST00000493166 SLC24A2Q9UI40 661 aa12.46□□□□□ -0.41
CLIP2-209ENST00000493166 ASF1AQ9Y294 204 aa12.46□□□□□ -0.41
CLIP2-209ENST00000493166 PCM1Q15154 2024 aa12.45□□□□□ -0.42
CLIP2-209ENST00000493166 MN1Q10571 1320 aaPredicted RBP12.45□□□□□ -0.42
CLIP2-209ENST00000493166 CAPN5O15484 640 aaPredicted RBP12.45□□□□□ -0.42
CLIP2-209ENST00000493166 BRINP1O60477 761 aa12.45□□□□□ -0.42
CLIP2-209ENST00000493166 HAUS5O94927 633 aa12.45□□□□□ -0.42
CLIP2-209ENST00000493166 SLCO2B1O94956 709 aa12.45□□□□□ -0.42
CLIP2-209ENST00000493166 JMJD7P0C870 316 aa12.45□□□□□ -0.42
CLIP2-209ENST00000493166 ACADLP28330 430 aa12.45□□□□□ -0.42
CLIP2-209ENST00000493166 LSSP48449 732 aa12.45□□□□□ -0.42
CLIP2-209ENST00000493166 CARSP49589 748 aaKnown RBP12.45□□□□□ -0.42
CLIP2-209ENST00000493166 GFERP55789 205 aa12.45□□□□□ -0.42
CLIP2-209ENST00000493166 PRKG2Q13237 762 aa12.45□□□□□ -0.42
CLIP2-209ENST00000493166 TRA2AQ13595 282 aaKnown RBP eCLIP12.45□□□□□ -0.42
CLIP2-209ENST00000493166 FRG1Q14331 258 aaKnown RBP12.45□□□□□ -0.42
CLIP2-209ENST00000493166 C16orf72Q14CZ0 275 aa12.45□□□□□ -0.42
CLIP2-209ENST00000493166 TRADDQ15628 312 aa12.45□□□□□ -0.42
CLIP2-209ENST00000493166 GLE1Q53GS7 698 aaKnown RBP12.45□□□□□ -0.42
CLIP2-209ENST00000493166 PLEKHS1Q5SXH7 462 aa12.45□□□□□ -0.42
CLIP2-209ENST00000493166 IRGCQ6NXR0 463 aa12.45□□□□□ -0.42
CLIP2-209ENST00000493166 CNSTQ6PJW8 725 aa12.45□□□□□ -0.42
CLIP2-209ENST00000493166 ZDHHC24Q6UX98 284 aa12.45□□□□□ -0.42
CLIP2-209ENST00000493166 CAPN12Q6ZSI9 719 aa12.45□□□□□ -0.42
CLIP2-209ENST00000493166 KIAA0408Q6ZU52 694 aa12.45□□□□□ -0.42
CLIP2-209ENST00000493166 OOSP2Q86WS3 158 aa12.45□□□□□ -0.42
CLIP2-209ENST00000493166 VRK3Q8IV63 474 aa12.45□□□□□ -0.42
CLIP2-209ENST00000493166 CNTN4Q8IWV2 1026 aa12.45□□□□□ -0.42
CLIP2-209ENST00000493166 PALM2Q8IXS6 379 aa12.45□□□□□ -0.42
CLIP2-209ENST00000493166 TBC1D21Q8IYX1 336 aa12.45□□□□□ -0.42
CLIP2-209ENST00000493166 OR5AR1Q8NGP9 310 aa12.45□□□□□ -0.42
CLIP2-209ENST00000493166 SKA2Q8WVK7 121 aaPredicted RBP12.45□□□□□ -0.42
CLIP2-209ENST00000493166 ZCCHC14Q8WYQ9 949 aaKnown RBP12.45□□□□□ -0.42
CLIP2-209ENST00000493166 TGM7Q96PF1 710 aa12.45□□□□□ -0.42
CLIP2-209ENST00000493166 PHACTR1Q9C0D0 580 aa12.45□□□□□ -0.42
CLIP2-209ENST00000493166 KLHL3Q9UH77 587 aa12.45□□□□□ -0.42
CLIP2-209ENST00000493166 CDYLQ9Y232 598 aa12.45□□□□□ -0.42
CLIP2-209ENST00000493166 LOXL2Q9Y4K0 774 aa12.45□□□□□ -0.42
CLIP2-209ENST00000493166 PCDHGA8Q9Y5G5 932 aa12.45□□□□□ -0.42
CLIP2-209ENST00000493166 COMMD10Q9Y6G5 202 aa12.45□□□□□ -0.42
CLIP2-209ENST00000493166 IGF2RP11717 2491 aa12.45□□□□□ -0.42
CLIP2-209ENST00000493166 ZZEF1O43149 2961 aa12.44□□□□□ -0.42
CLIP2-209ENST00000493166 A0A1W2PNU3 283 aaPredicted RBP12.44□□□□□ -0.42
CLIP2-209ENST00000493166 PMS2P1A4D2B8 440 aa12.44□□□□□ -0.42
CLIP2-209ENST00000493166 OR5K3A6NET4 321 aa12.44□□□□□ -0.42
CLIP2-209ENST00000493166 A8MU76 341 aa12.44□□□□□ -0.42
CLIP2-209ENST00000493166 PLD2O14939 933 aa12.44□□□□□ -0.42
CLIP2-209ENST00000493166 HGSO14964 777 aaPredicted RBP12.44□□□□□ -0.42
CLIP2-209ENST00000493166 RPN2P04844 631 aa12.44□□□□□ -0.42
CLIP2-209ENST00000493166 HGFP14210 728 aa12.44□□□□□ -0.42
CLIP2-209ENST00000493166 RBMS1P29558 406 aaKnown RBP12.44□□□□□ -0.42
CLIP2-209ENST00000493166 CSTF2P33240 577 aaKnown RBP eCLIP12.44□□□□□ -0.42
CLIP2-209ENST00000493166 LEPRP48357 1165 aaKnown RBP12.44□□□□□ -0.42
CLIP2-209ENST00000493166 MGAT5Q09328 741 aa12.44□□□□□ -0.42
CLIP2-209ENST00000493166 ABRQ12979 859 aa12.44□□□□□ -0.42
CLIP2-209ENST00000493166 TTLL9Q3SXZ7 439 aa12.44□□□□□ -0.42
CLIP2-209ENST00000493166 TEDDM1Q5T9Z0 273 aa12.44□□□□□ -0.42
CLIP2-209ENST00000493166 ARMC6Q6NXE6 501 aa12.44□□□□□ -0.42
CLIP2-209ENST00000493166 ZNF549Q6P9A3 640 aa12.44□□□□□ -0.42
CLIP2-209ENST00000493166 LSMEM2Q8N112 164 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms