RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	LRRC66	Q68CR7	880 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	KLHL10	Q6JEL2	608 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	FAM72D	Q6L9T8	149 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	TIGD7	Q6NT04	549 aa	Predicted RBP	5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	FGD2	Q7Z6J4	655 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	NLRP8	Q86W28	1048 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	FAM72B	Q86X60	149 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	TMTC1	Q8IUR5	882 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	PASD1	Q8IV76	773 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	SIAH3	Q8IW03	269 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	CARF	Q8N187	725 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	WDTC1	Q8N5D0	677 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	EHBP1	Q8NDI1	1231 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	ZNF397	Q8NF99	534 aa	Predicted RBP	5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	OR10Q1	Q8NGQ4	319 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	GPR150	Q8NGU9	434 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	LMO3	Q8TAP4	145 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	FAM57A	Q8TBR7	257 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	FAM222B	Q8WU58	562 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	ZNF606	Q8WXB4	792 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	ROBO4	Q8WZ75	1007 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	NT5C3B	Q969T7	300 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	TBC1D31	Q96DN5	1066 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	SCRN2	Q96FV2	425 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	PERP	Q96FX8	193 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	MESP1	Q9BRJ9	268 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	CINP	Q9BW66	212 aa	Predicted RBP	5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	MAGEB5	Q9BZ81	275 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	OR2AG1	Q9H205	316 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	SOX17	Q9H6I2	414 aa	Predicted RBP	5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	CATSPERB	Q9H7T0	1116 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	MRM3	Q9HC36	420 aa	Known RBP	5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	UBE2T	Q9NPD8	197 aa	Predicted RBP	5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	KLHL1	Q9NR64	748 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	YAE1D1	Q9NRH1	226 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	TAS2R14	Q9NYV8	317 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	ATXN10	Q9UBB4	475 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	CNOT6	Q9ULM6	557 aa	Known RBP	5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	WDR37	Q9Y2I8	494 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	AP1M2	Q9Y6Q5	423 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	ARID1A	O14497	2285 aa		5.17	□□□□□ -1.58
SEC13-219	ENST00000492602	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	5.17	□□□□□ -1.58	3e-8	■□□□□ 10.4
SEC13-219	ENST00000492602	NUP210L	Q5VU65	1888 aa		5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	NSG1	A0A0A6YYJ2	146 aa		5.16	□□□□□ -1.58
SEC13-219	ENST00000492602		A0A1B0GTH9	108 aa		5.16	□□□□□ -1.58
SEC13-219	ENST00000492602		A0A1W2PQ67	120 aa		5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	GSAP	A4D1B5	854 aa		5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	ASPDH	A6ND91	283 aa		5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	USP27X	A6NNY8	438 aa		5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	OR2B3	O76000	313 aa		5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	TP53	P04637	393 aa	Predicted RBP	5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	MSL3P1	P0C860	447 aa		5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	FAM157C	P0CG43	387 aa		5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	ST6GAL1	P15907	406 aa		5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	ZNF7	P17097	686 aa	Predicted RBP	5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	POLR2C	P19387	275 aa	Predicted RBP	5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	ALAS2	P22557	587 aa		5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	FDXR	P22570	491 aa		5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	IL4R	P24394	825 aa		5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	EEF1D	P29692	281 aa	Known RBP	5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	GNA15	P30679	374 aa		5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	RBMX	P38159	391 aa	Known RBP	5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	PEX19	P40855	299 aa		5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	NSG1	P42857	185 aa		5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	MTIF2	P46199	727 aa	Known RBP	5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	FMO5	P49326	533 aa		5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	YBEY	P58557	167 aa	Predicted RBP	5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	PTS	Q03393	145 aa		5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	ZNF33B	Q06732	778 aa		5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	NSUN2	Q08J23	767 aa	Known RBP eCLIP	5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	PRKAA1	Q13131	559 aa		5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	DAZAP2	Q15038	168 aa	Predicted RBP	5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	NKG7	Q16617	165 aa		5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	MEA1	Q16626	185 aa		5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	PARP15	Q460N3	678 aa		5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	RAB6C	Q53S08	254 aa		5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	ABHD17B	Q5VST6	288 aa		5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	KIAA0930	Q6ICG6	404 aa	Predicted RBP	5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	WASH2P	Q6VEQ5	465 aa		5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	GBP6	Q6ZN66	633 aa		5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	ACAD11	Q709F0	780 aa		5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	MCAT	Q8IVS2	390 aa	Known RBP	5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	FMR1NB	Q8N0W7	255 aa	Predicted RBP	5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	MAPK1IP1L	Q8NDC0	245 aa		5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	NELFB	Q8WX92	580 aa		5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	C8orf44	Q96CB5	159 aa		5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	FRMD6	Q96NE9	622 aa		5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	SPSB2	Q99619	263 aa		5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	SARG	Q9BW04	601 aa		5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	HES7	Q9BYE0	225 aa		5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	SLC6A16	Q9GZN6	736 aa		5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	KLHL25	Q9H0H3	589 aa		5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	RAB6C	Q9H0N0	254 aa		5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	TP63	Q9H3D4	680 aa	Predicted RBP	5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	PDF	Q9HBH1	243 aa		5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	SLC22A11	Q9NSA0	550 aa		5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	FAM207A	Q9NSI2	230 aa	Predicted RBP	5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	FANCL	Q9NW38	375 aa		5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	IRAK4	Q9NWZ3	460 aa		5.16	□□□□□ -1.58
SEC13-219	ENST00000492602	CDC42EP3	Q9UKI2	254 aa		5.16	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms