RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 COL12A1Q99715 3063 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 TTLL8A6PVC2 850 aa8.88□□□□□ -0.99
HDAC3-212ENST00000492407 GOLGA6L6A8MZA4 724 aa8.88□□□□□ -0.99
HDAC3-212ENST00000492407 AKR1B15C9JRZ8 316 aaPredicted RBP8.88□□□□□ -0.99
HDAC3-212ENST00000492407 K7EM74 188 aa8.88□□□□□ -0.99
HDAC3-212ENST00000492407 DPM1O60762 260 aa8.88□□□□□ -0.99
HDAC3-212ENST00000492407 PTPN7P35236 360 aa8.88□□□□□ -0.99
HDAC3-212ENST00000492407 RORAP35398 523 aa8.88□□□□□ -0.99
HDAC3-212ENST00000492407 MAGEA1P43355 309 aa8.88□□□□□ -0.99
HDAC3-212ENST00000492407 PRLHRP49683 370 aa8.88□□□□□ -0.99
HDAC3-212ENST00000492407 KPNA2P52292 529 aaKnown RBP8.88□□□□□ -0.99
HDAC3-212ENST00000492407 RRADP55042 308 aa8.88□□□□□ -0.99
HDAC3-212ENST00000492407 PPP1CAP62136 330 aa8.88□□□□□ -0.99
HDAC3-212ENST00000492407 XIAPP98170 497 aa8.88□□□□□ -0.99
HDAC3-212ENST00000492407 MSLNQ13421 630 aaPredicted RBP8.88□□□□□ -0.99
HDAC3-212ENST00000492407 KRT33BQ14525 404 aa8.88□□□□□ -0.99
HDAC3-212ENST00000492407 KCNAB1Q14722 419 aa8.88□□□□□ -0.99
HDAC3-212ENST00000492407 NOMO1Q15155 1222 aa8.88□□□□□ -0.99
HDAC3-212ENST00000492407 PLEKHS1Q5SXH7 462 aa8.88□□□□□ -0.99
HDAC3-212ENST00000492407 KAZNQ674X7 775 aa8.88□□□□□ -0.99
HDAC3-212ENST00000492407 B4GALNT4Q76KP1 1039 aa8.88□□□□□ -0.99
HDAC3-212ENST00000492407 SNX20Q7Z614 316 aa8.88□□□□□ -0.99
HDAC3-212ENST00000492407 TMEM135Q86UB9 458 aa8.88□□□□□ -0.99
HDAC3-212ENST00000492407 CDKL3Q8IVW4 592 aaPredicted RBP8.88□□□□□ -0.99
HDAC3-212ENST00000492407 KLHDC8BQ8IXV7 354 aa8.88□□□□□ -0.99
HDAC3-212ENST00000492407 CFAP206Q8IYR0 622 aa8.88□□□□□ -0.99
HDAC3-212ENST00000492407 CCDC170Q8IYT3 715 aa8.88□□□□□ -0.99
HDAC3-212ENST00000492407 DSELQ8IZU8 1212 aa8.88□□□□□ -0.99
HDAC3-212ENST00000492407 OR4K2Q8NGD2 314 aa8.88□□□□□ -0.99
HDAC3-212ENST00000492407 MR1Q95460 341 aa8.88□□□□□ -0.99
HDAC3-212ENST00000492407 HAUS1Q96CS2 278 aa8.88□□□□□ -0.99
HDAC3-212ENST00000492407 COPS8Q99627 209 aa8.88□□□□□ -0.99
HDAC3-212ENST00000492407 SLX1AQ9BQ83 275 aa8.88□□□□□ -0.99
HDAC3-212ENST00000492407 SRMSQ9H3Y6 488 aa8.88□□□□□ -0.99
HDAC3-212ENST00000492407 MVB12BQ9H7P6 319 aa8.88□□□□□ -0.99
HDAC3-212ENST00000492407 C5AR2Q9P296 337 aa8.88□□□□□ -0.99
HDAC3-212ENST00000492407 MAP4K5Q9Y4K4 846 aa8.88□□□□□ -0.99
HDAC3-212ENST00000492407 IGLV3-16A0A075B6K0 115 aa8.87□□□□□ -0.99
HDAC3-212ENST00000492407 H7C0C1 242 aa8.87□□□□□ -0.99
HDAC3-212ENST00000492407 H7C0S8 307 aa8.87□□□□□ -0.99
HDAC3-212ENST00000492407 QSOX1O00391 747 aa8.87□□□□□ -0.99
HDAC3-212ENST00000492407 IFRD1O00458 451 aaPredicted RBP8.87□□□□□ -0.99
HDAC3-212ENST00000492407 SGTAO43765 313 aa8.87□□□□□ -0.99
HDAC3-212ENST00000492407 SORBS2O94875 1100 aaKnown RBP8.87□□□□□ -0.99
HDAC3-212ENST00000492407 AP2A2O94973 939 aa8.87□□□□□ -0.99
HDAC3-212ENST00000492407 DDAH2O95865 285 aa8.87□□□□□ -0.99
HDAC3-212ENST00000492407 AGTP01019 485 aa8.87□□□□□ -0.99
HDAC3-212ENST00000492407 PDGFAP04085 211 aa8.87□□□□□ -0.99
HDAC3-212ENST00000492407 CCDC159P0C7I6 412 aa8.87□□□□□ -0.99
HDAC3-212ENST00000492407 TNNT1P13805 278 aa8.87□□□□□ -0.99
HDAC3-212ENST00000492407 ATP1B2P14415 290 aaPredicted RBP8.87□□□□□ -0.99
HDAC3-212ENST00000492407 ITGALP20701 1170 aa8.87□□□□□ -0.99
HDAC3-212ENST00000492407 CDH3P22223 829 aa8.87□□□□□ -0.99
HDAC3-212ENST00000492407 RBL1P28749 1068 aa8.87□□□□□ -0.99
HDAC3-212ENST00000492407 PRDX3P30048 256 aaKnown RBP8.87□□□□□ -0.99
HDAC3-212ENST00000492407 CA5AP35218 305 aa8.87□□□□□ -0.99
HDAC3-212ENST00000492407 CETN2P41208 172 aa8.87□□□□□ -0.99
HDAC3-212ENST00000492407 ATP5OP48047 213 aa8.87□□□□□ -0.99
HDAC3-212ENST00000492407 PREPP48147 710 aa8.87□□□□□ -0.99
HDAC3-212ENST00000492407 VAV2P52735 878 aa8.87□□□□□ -0.99
HDAC3-212ENST00000492407 MLLT10P55197 1068 aa8.87□□□□□ -0.99
HDAC3-212ENST00000492407 PLOD1Q02809 727 aaPredicted RBP8.87□□□□□ -0.99
HDAC3-212ENST00000492407 TBX2Q13207 712 aaPredicted RBP8.87□□□□□ -0.99
HDAC3-212ENST00000492407 GPS2Q13227 327 aa8.87□□□□□ -0.99
HDAC3-212ENST00000492407 GPR19Q15760 415 aa8.87□□□□□ -0.99
HDAC3-212ENST00000492407 FHL5Q5TD97 284 aa8.87□□□□□ -0.99
HDAC3-212ENST00000492407 FAM199XQ6PEV8 388 aaPredicted RBP8.87□□□□□ -0.99
HDAC3-212ENST00000492407 SARM1Q6SZW1 724 aa8.87□□□□□ -0.99
HDAC3-212ENST00000492407 NXPE1Q8N323 547 aa8.87□□□□□ -0.99
HDAC3-212ENST00000492407 SLC38A9Q8NBW4 561 aa8.87□□□□□ -0.99
HDAC3-212ENST00000492407 OR4E2Q8NGC2 313 aa8.87□□□□□ -0.99
HDAC3-212ENST00000492407 CPT1CQ8TCG5 803 aa8.87□□□□□ -0.99
HDAC3-212ENST00000492407 LCN9Q8WX39 176 aa8.87□□□□□ -0.99
HDAC3-212ENST00000492407 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.87□□□□□ -0.99
HDAC3-212ENST00000492407 NACC2Q96BF6 587 aa8.87□□□□□ -0.99
HDAC3-212ENST00000492407 TRIM55Q9BYV6 548 aa8.87□□□□□ -0.99
HDAC3-212ENST00000492407 CHST8Q9H2A9 424 aa8.87□□□□□ -0.99
HDAC3-212ENST00000492407 AKIRIN1Q9H9L7 192 aaPredicted RBP8.87□□□□□ -0.99
HDAC3-212ENST00000492407 LRRC4CQ9HCJ2 640 aa8.87□□□□□ -0.99
HDAC3-212ENST00000492407 SOHLH2Q9NX45 425 aa8.87□□□□□ -0.99
HDAC3-212ENST00000492407 CRLS1Q9UJA2 301 aa8.87□□□□□ -0.99
HDAC3-212ENST00000492407 TCFL5Q9UL49 500 aa8.87□□□□□ -0.99
HDAC3-212ENST00000492407 SNX7Q9UNH6 387 aa8.87□□□□□ -0.99
HDAC3-212ENST00000492407 PADI2Q9Y2J8 665 aa8.87□□□□□ -0.99
HDAC3-212ENST00000492407 ARL5AQ9Y689 179 aa8.87□□□□□ -0.99
HDAC3-212ENST00000492407 AP1M2Q9Y6Q5 423 aa8.87□□□□□ -0.99
HDAC3-212ENST00000492407 RELNP78509 3460 aa8.86□□□□□ -0.99
HDAC3-212ENST00000492407 TRBV5-4A0A0C4DH59 114 aa8.86□□□□□ -0.99
HDAC3-212ENST00000492407 ARGFXA6NJG6 315 aa8.86□□□□□ -0.99
HDAC3-212ENST00000492407 SLC9B1P1A6NJY1 282 aa8.86□□□□□ -0.99
HDAC3-212ENST00000492407 C2orf74A8MZ97 194 aa8.86□□□□□ -0.99
HDAC3-212ENST00000492407 BUD23O43709 281 aaKnown RBP8.86□□□□□ -0.99
HDAC3-212ENST00000492407 KDM1AO60341 852 aa8.86□□□□□ -0.99
HDAC3-212ENST00000492407 TMEM63AO94886 807 aa8.86□□□□□ -0.99
HDAC3-212ENST00000492407 FOSL1P15407 271 aa8.86□□□□□ -0.99
HDAC3-212ENST00000492407 POLR2CP19387 275 aaPredicted RBP8.86□□□□□ -0.99
HDAC3-212ENST00000492407 NR1D1P20393 614 aa8.86□□□□□ -0.99
HDAC3-212ENST00000492407 AGXTP21549 392 aa8.86□□□□□ -0.99
HDAC3-212ENST00000492407 PSMA3P25788 255 aa8.86□□□□□ -0.99
HDAC3-212ENST00000492407 CTNNA1P35221 906 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms