RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 C11orf96Q7Z7L8 435 aa10.79□□□□□ -0.68
TMEM39A-211ENST00000491685 CAND1Q86VP6 1230 aaKnown RBP10.79□□□□□ -0.68
TMEM39A-211ENST00000491685 PALM2Q8IXS6 379 aa10.79□□□□□ -0.68
TMEM39A-211ENST00000491685 RSC1A1Q92681 617 aa10.79□□□□□ -0.68
TMEM39A-211ENST00000491685 HDAC10Q969S8 669 aa10.79□□□□□ -0.68
TMEM39A-211ENST00000491685 STAMBPL1Q96FJ0 436 aa10.79□□□□□ -0.68
TMEM39A-211ENST00000491685 PKNOX2Q96KN3 472 aa10.79□□□□□ -0.68
TMEM39A-211ENST00000491685 SERPINB12Q96P63 405 aa10.79□□□□□ -0.68
TMEM39A-211ENST00000491685 VPS35Q96QK1 796 aa10.79□□□□□ -0.68
TMEM39A-211ENST00000491685 ZPBPQ9BS86 351 aa10.79□□□□□ -0.68
TMEM39A-211ENST00000491685 KIFC1Q9BW19 673 aa10.79□□□□□ -0.68
TMEM39A-211ENST00000491685 PIH1D1Q9NWS0 290 aaKnown RBP10.79□□□□□ -0.68
TMEM39A-211ENST00000491685 CRLS1Q9UJA2 301 aa10.79□□□□□ -0.68
TMEM39A-211ENST00000491685 SOX13Q9UN79 622 aa10.79□□□□□ -0.68
TMEM39A-211ENST00000491685 WDR37Q9Y2I8 494 aa10.79□□□□□ -0.68
TMEM39A-211ENST00000491685 MRPS18BQ9Y676 258 aaKnown RBP10.79□□□□□ -0.68
TMEM39A-211ENST00000491685 FAM237BA0A1B0GVD1 139 aa10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 PDZK1P1A8MUH7 402 aa10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 EIF3HO15372 352 aaKnown RBP eCLIP10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 SUV39H1O43463 412 aa10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 KIF1CO43896 1103 aaKnown RBP10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 KCNJ13O60928 360 aa10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 AVILO75366 819 aa10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 CDK14O94921 469 aa10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 PRAMEF1O95521 474 aa10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 C9P02748 559 aa10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 PRKAR1AP10644 381 aa10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 RPL10P27635 214 aaKnown RBP10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 MC4RP32245 332 aa10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 RPL21P46778 160 aaKnown RBP10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 POLE2P56282 527 aa10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 SH3BP2P78314 561 aa10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 TMEM115Q12893 351 aaPredicted RBP10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 THOC5Q13769 683 aaKnown RBP10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 HIF1AQ16665 826 aa10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 BBS9Q3SYG4 887 aa10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 AARS2Q5JTZ9 985 aaKnown RBP10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 ANKRD22Q5VYY1 191 aa10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 MRNIPQ6NTE8 343 aa10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 ZNF449Q6P9G9 518 aa10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 BORAQ6PGQ7 559 aa10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 AFTPHQ6ULP2 937 aa10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 CEACAM20Q6UY09 585 aa10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 ATG14Q6ZNE5 492 aa10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 TMEM26Q6ZUK4 368 aa10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 MICALCLQ6ZW33 695 aa10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 LRRTM4Q86VH4 590 aa10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 PTRH1Q86Y79 214 aaKnown RBP10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 LMNTD2Q8IXW0 634 aa10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 NLGN4XQ8N0W4 816 aa10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 NLGN4YQ8NFZ3 816 aaPredicted RBP10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 OR13C4Q8NGS5 318 aa10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 GPR150Q8NGU9 434 aa10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 OR4L1Q8NH43 312 aa10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 CALML6Q8TD86 181 aa10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 PYROXD1Q8WU10 500 aa10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 NAT14Q8WUY8 206 aa10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 IFT81Q8WYA0 676 aa10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 UBXN4Q92575 508 aa10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 KIAA1143Q96AT1 154 aaPredicted RBP10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 SGSM3Q96HU1 749 aa10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 ZNF514Q96K75 400 aaPredicted RBP10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 DNAJC1Q96KC8 554 aaKnown RBP10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 TGM7Q96PF1 710 aa10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 TIMM29Q9BSF4 260 aa10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 FBXO8Q9NRD0 319 aa10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 GEMIN8Q9NWZ8 242 aaKnown RBP10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 FKBPLQ9UIM3 349 aa10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 TMEM184BQ9Y519 407 aaPredicted RBP10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 KCTD3Q9Y597 815 aa10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 DNMT3AQ9Y6K1 912 aaPredicted RBP10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 SPENQ96T58 3664 aaKnown RBP10.78□□□□□ -0.68
TMEM39A-211ENST00000491685 KLHL33A6NCF5 533 aa10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 ZNF891A8MT65 544 aaPredicted RBP10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 QSOX1O00391 747 aa10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 GAPDHSO14556 408 aaPredicted RBP10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 KMOO15229 486 aa10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 CTIFO43310 598 aaKnown RBP10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 UGT1A9O60656 530 aa10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 USP1O94782 785 aa10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 TMEM63AO94886 807 aa10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 ANKRD34CP0C6C1 535 aa10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 XRCC1P18887 633 aaPredicted RBP10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 UGT1A6P19224 532 aa10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 UGT1A1P22309 533 aa10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 UGT1A4P22310 534 aa10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 F8A1P23610 371 aa10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 PSMA3P25788 255 aa10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 SEPHS1P49903 392 aa10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 ZNF140P52738 457 aaPredicted RBP10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 CTSCP53634 463 aa10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 MRPS25P82663 173 aaKnown RBP10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 CDC20Q12834 499 aa10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 KCNAB2Q13303 367 aa10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 GPR18Q14330 331 aa10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 PTPRCAPQ14761 206 aa10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 FAM83HQ6ZRV2 1179 aaPredicted RBP10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 RBM12BQ8IXT5 1001 aaKnown RBP10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 MYRIPQ8NFW9 859 aa10.77□□□□□ -0.69
TMEM39A-211ENST00000491685 ELMO2Q96JJ3 720 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms