RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 SPDYE1Q8NFV5 336 aaPredicted RBP16.13■□□□□ 0.17
PDLIM2-217ENST00000491330 OR52K1Q8NGK4 314 aa16.13■□□□□ 0.17
PDLIM2-217ENST00000491330 C1orf54Q8WWF1 131 aa16.13■□□□□ 0.17
PDLIM2-217ENST00000491330 ATG4AQ8WYN0 398 aa16.13■□□□□ 0.17
PDLIM2-217ENST00000491330 ELMO1Q92556 727 aa16.13■□□□□ 0.17
PDLIM2-217ENST00000491330 PEX13Q92968 403 aa16.13■□□□□ 0.17
PDLIM2-217ENST00000491330 NAP1L3Q99457 506 aaPredicted RBP16.13■□□□□ 0.17
PDLIM2-217ENST00000491330 TFB2MQ9H5Q4 396 aaKnown RBP16.13■□□□□ 0.17
PDLIM2-217ENST00000491330 BFARQ9NZS9 450 aa16.13■□□□□ 0.17
PDLIM2-217ENST00000491330 CROTQ9UKG9 612 aa16.13■□□□□ 0.17
PDLIM2-217ENST00000491330 RIMKLBQ9ULI2 386 aa16.13■□□□□ 0.17
PDLIM2-217ENST00000491330 POLHQ9Y253 713 aa16.13■□□□□ 0.17
PDLIM2-217ENST00000491330 ASF1AQ9Y294 204 aa16.13■□□□□ 0.17
PDLIM2-217ENST00000491330 DRG1Q9Y295 367 aaKnown RBP16.13■□□□□ 0.17
PDLIM2-217ENST00000491330 MRFAP1Q9Y605 127 aa16.13■□□□□ 0.17
PDLIM2-217ENST00000491330 AHCTF1Q8WYP5 2266 aa16.13■□□□□ 0.17
PDLIM2-217ENST00000491330 WDFY3Q8IZQ1 3526 aa16.12■□□□□ 0.17
PDLIM2-217ENST00000491330 PIPSLA2A3N6 862 aa16.12■□□□□ 0.17
PDLIM2-217ENST00000491330 MROH6A6NGR9 719 aa16.12■□□□□ 0.17
PDLIM2-217ENST00000491330 CCL22O00626 93 aa16.12■□□□□ 0.17
PDLIM2-217ENST00000491330 NKX2-8O15522 239 aa16.12■□□□□ 0.17
PDLIM2-217ENST00000491330 SCRG1O75711 98 aa16.12■□□□□ 0.17
PDLIM2-217ENST00000491330 SUN1O94901 812 aa16.12■□□□□ 0.17
PDLIM2-217ENST00000491330 HBQ1P09105 142 aa16.12■□□□□ 0.17
PDLIM2-217ENST00000491330 POLR2CP19387 275 aaPredicted RBP16.12■□□□□ 0.17
PDLIM2-217ENST00000491330 SHMT2P34897 504 aa16.12■□□□□ 0.17
PDLIM2-217ENST00000491330 PREPP48147 710 aa16.12■□□□□ 0.17
PDLIM2-217ENST00000491330 TMED2Q15363 201 aa16.12■□□□□ 0.17
PDLIM2-217ENST00000491330 DEFB109BQ30KR1 87 aa16.12■□□□□ 0.17
PDLIM2-217ENST00000491330 AMIGO1Q86WK6 493 aa16.12■□□□□ 0.17
PDLIM2-217ENST00000491330 OR4L1Q8NH43 312 aa16.12■□□□□ 0.17
PDLIM2-217ENST00000491330 CPT1BQ92523 772 aa16.12■□□□□ 0.17
PDLIM2-217ENST00000491330 RMDN2Q96LZ7 410 aa16.12■□□□□ 0.17
PDLIM2-217ENST00000491330 RANBP9Q96S59 729 aa16.12■□□□□ 0.17
PDLIM2-217ENST00000491330 LHX9Q9NQ69 397 aa16.12■□□□□ 0.17
PDLIM2-217ENST00000491330 STARD5Q9NSY2 213 aa16.12■□□□□ 0.17
PDLIM2-217ENST00000491330 G3BP2Q9UN86 482 aaKnown RBP16.12■□□□□ 0.17
PDLIM2-217ENST00000491330 MKRN2OSH3BPM6 223 aa16.11■□□□□ 0.17
PDLIM2-217ENST00000491330 BASP1P80723 227 aaKnown RBP16.11■□□□□ 0.17
PDLIM2-217ENST00000491330 DBN1Q16643 649 aa16.11■□□□□ 0.17
PDLIM2-217ENST00000491330 TSTD2Q5T7W7 516 aa16.11■□□□□ 0.17
PDLIM2-217ENST00000491330 ARMC3Q5W041 872 aa16.11■□□□□ 0.17
PDLIM2-217ENST00000491330 DUS1LQ6P1R4 473 aaKnown RBP16.11■□□□□ 0.17
PDLIM2-217ENST00000491330 PACS1Q6VY07 963 aa16.11■□□□□ 0.17
PDLIM2-217ENST00000491330 TBC1D21Q8IYX1 336 aa16.11■□□□□ 0.17
PDLIM2-217ENST00000491330 GPR135Q8IZ08 494 aa16.11■□□□□ 0.17
PDLIM2-217ENST00000491330 RAB42Q8N4Z0 105 aa16.11■□□□□ 0.17
PDLIM2-217ENST00000491330 CLDN19Q8N6F1 224 aa16.11■□□□□ 0.17
PDLIM2-217ENST00000491330 C9orf43Q8TAL5 461 aaPredicted RBP16.11■□□□□ 0.17
PDLIM2-217ENST00000491330 HDAC10Q969S8 669 aa16.11■□□□□ 0.17
PDLIM2-217ENST00000491330 CLIP3Q96DZ5 547 aa16.11■□□□□ 0.17
PDLIM2-217ENST00000491330 PBKQ96KB5 322 aa16.11■□□□□ 0.17
PDLIM2-217ENST00000491330 C17orf62Q9BQA9 187 aa16.11■□□□□ 0.17
PDLIM2-217ENST00000491330 TLR10Q9BXR5 811 aa16.11■□□□□ 0.17
PDLIM2-217ENST00000491330 SEMA4CQ9C0C4 833 aa16.11■□□□□ 0.17
PDLIM2-217ENST00000491330 TWSG1Q9GZX9 223 aa16.11■□□□□ 0.17
PDLIM2-217ENST00000491330 PIH1D1Q9NWS0 290 aaKnown RBP16.11■□□□□ 0.17
PDLIM2-217ENST00000491330 TCRBV7S2A1N4TA0A589 114 aa16.1■□□□□ 0.17
PDLIM2-217ENST00000491330 KPNA5O15131 536 aa16.1■□□□□ 0.17
PDLIM2-217ENST00000491330 APOA4P06727 396 aa16.1■□□□□ 0.17
PDLIM2-217ENST00000491330 EBLN1P0CF75 366 aa16.1■□□□□ 0.17
PDLIM2-217ENST00000491330 FOLR1P15328 257 aa16.1■□□□□ 0.17
PDLIM2-217ENST00000491330 WT1P19544 449 aaPredicted RBP16.1■□□□□ 0.17
PDLIM2-217ENST00000491330 CYP2A7P20853 494 aa16.1■□□□□ 0.17
PDLIM2-217ENST00000491330 NPY2RP49146 381 aa16.1■□□□□ 0.17
PDLIM2-217ENST00000491330 TTPAP49638 278 aa16.1■□□□□ 0.17
PDLIM2-217ENST00000491330 CDK16Q00536 496 aa16.1■□□□□ 0.17
PDLIM2-217ENST00000491330 KCNC4Q03721 635 aa16.1■□□□□ 0.17
PDLIM2-217ENST00000491330 SEMA5AQ13591 1074 aa16.1■□□□□ 0.17
PDLIM2-217ENST00000491330 DNASE1L3Q13609 305 aa16.1■□□□□ 0.17
PDLIM2-217ENST00000491330 BOP1Q14137 746 aaKnown RBP16.1■□□□□ 0.17
PDLIM2-217ENST00000491330 ERV3-1Q14264 604 aa16.1■□□□□ 0.17
PDLIM2-217ENST00000491330 CCDC38Q502W7 563 aa16.1■□□□□ 0.17
PDLIM2-217ENST00000491330 PCID2Q5JVF3 399 aa16.1■□□□□ 0.17
PDLIM2-217ENST00000491330 PWWP2BQ6NUJ5 590 aa16.1■□□□□ 0.17
PDLIM2-217ENST00000491330 SDCCAG8Q86SQ7 713 aaPredicted RBP16.1■□□□□ 0.17
PDLIM2-217ENST00000491330 ASZ1Q8WWH4 475 aa16.1■□□□□ 0.17
PDLIM2-217ENST00000491330 THAP4Q8WY91 577 aa16.1■□□□□ 0.17
PDLIM2-217ENST00000491330 MR1Q95460 341 aa16.1■□□□□ 0.17
PDLIM2-217ENST00000491330 PANX3Q96QZ0 392 aa16.1■□□□□ 0.17
PDLIM2-217ENST00000491330 IL22Q9GZX6 179 aa16.1■□□□□ 0.17
PDLIM2-217ENST00000491330 OR52A5Q9H2C5 316 aa16.1■□□□□ 0.17
PDLIM2-217ENST00000491330 EIF2B3Q9NR50 452 aaKnown RBP16.1■□□□□ 0.17
PDLIM2-217ENST00000491330 LATS2Q9NRM7 1088 aa16.1■□□□□ 0.17
PDLIM2-217ENST00000491330 IL17BQ9UHF5 180 aa16.1■□□□□ 0.17
PDLIM2-217ENST00000491330 POMT2Q9UKY4 750 aa16.1■□□□□ 0.17
PDLIM2-217ENST00000491330 TTC7AQ9ULT0 858 aaPredicted RBP16.1■□□□□ 0.17
PDLIM2-217ENST00000491330 BTRCQ9Y297 605 aa16.1■□□□□ 0.17
PDLIM2-217ENST00000491330 CCDC162PA2VCL2 907 aa16.09■□□□□ 0.17
PDLIM2-217ENST00000491330 SLC9B1P1A6NJY1 282 aa16.09■□□□□ 0.17
PDLIM2-217ENST00000491330 CES2O00748 559 aa16.09■□□□□ 0.17
PDLIM2-217ENST00000491330 CEP104O60308 925 aa16.09■□□□□ 0.17
PDLIM2-217ENST00000491330 CREG1O75629 220 aa16.09■□□□□ 0.17
PDLIM2-217ENST00000491330 FGGP02679 453 aa16.09■□□□□ 0.17
PDLIM2-217ENST00000491330 NTRK1P04629 796 aa16.09■□□□□ 0.17
PDLIM2-217ENST00000491330 CD63P08962 238 aa16.09■□□□□ 0.17
PDLIM2-217ENST00000491330 AGXTP21549 392 aa16.09■□□□□ 0.17
PDLIM2-217ENST00000491330 PRDX3P30048 256 aaKnown RBP16.09■□□□□ 0.17
PDLIM2-217ENST00000491330 CA5AP35218 305 aa16.09■□□□□ 0.17
PDLIM2-217ENST00000491330 CDKN1CP49918 316 aaPredicted RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms