RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 TM4SF1P30408 202 aa3.4□□□□□ -1.87
PHC3-213ENST00000491258 CEACAM8P31997 349 aaPredicted RBP3.4□□□□□ -1.87
PHC3-213ENST00000491258 GGT5P36269 586 aa3.4□□□□□ -1.87
PHC3-213ENST00000491258 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.4□□□□□ -1.87
PHC3-213ENST00000491258 CDC16Q13042 620 aa3.4□□□□□ -1.87
PHC3-213ENST00000491258 SLC39A6Q13433 755 aa3.4□□□□□ -1.87
PHC3-213ENST00000491258 PDE1CQ14123 709 aaPredicted RBP3.4□□□□□ -1.87
PHC3-213ENST00000491258 PAQR6Q6TCH4 344 aa3.4□□□□□ -1.87
PHC3-213ENST00000491258 NOL8Q76FK4 1167 aaKnown RBP3.4□□□□□ -1.87
PHC3-213ENST00000491258 PM20D2Q8IYS1 436 aa3.4□□□□□ -1.87
PHC3-213ENST00000491258 ARHGEF28Q8N1W1 1705 aaKnown RBP3.4□□□□□ -1.87
PHC3-213ENST00000491258 ZNF843Q8N446 348 aa3.4□□□□□ -1.87
PHC3-213ENST00000491258 IL17REQ8NFR9 667 aa3.4□□□□□ -1.87
PHC3-213ENST00000491258 OR2T12Q8NG77 320 aa3.4□□□□□ -1.87
PHC3-213ENST00000491258 OR14L1PQ8NHC6 308 aa3.4□□□□□ -1.87
PHC3-213ENST00000491258 ZCCHC10Q8TBK6 192 aa3.4□□□□□ -1.87
PHC3-213ENST00000491258 OMA1Q96E52 524 aa3.4□□□□□ -1.87
PHC3-213ENST00000491258 SIL1Q9H173 461 aa3.4□□□□□ -1.87
PHC3-213ENST00000491258 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.4□□□□□ -1.87
PHC3-213ENST00000491258 PIK3C2AO00443 1686 aa3.39□□□□□ -1.87
PHC3-213ENST00000491258 PLCH1Q4KWH8 1693 aa3.39□□□□□ -1.87
PHC3-213ENST00000491258 TOPAZ1Q8N9V7 1692 aa3.39□□□□□ -1.87
PHC3-213ENST00000491258 TNRC18O15417 2968 aaPredicted RBP3.39□□□□□ -1.87
PHC3-213ENST00000491258 KDRP35968 1356 aa3.39□□□□□ -1.87
PHC3-213ENST00000491258 TDRD15B5MCY1 1934 aaKnown RBP3.39□□□□□ -1.87
PHC3-213ENST00000491258 KDM6AO15550 1401 aaPredicted RBP3.39□□□□□ -1.87
PHC3-213ENST00000491258 CCDC194A0A1B0GVG4 234 aa3.39□□□□□ -1.87
PHC3-213ENST00000491258 EIF4E1BA6NMX2 242 aaKnown RBP3.39□□□□□ -1.87
PHC3-213ENST00000491258 C15orf62A8K5M9 175 aa3.39□□□□□ -1.87
PHC3-213ENST00000491258 CSPG5O95196 566 aa3.39□□□□□ -1.87
PHC3-213ENST00000491258 BMP10O95393 424 aa3.39□□□□□ -1.87
PHC3-213ENST00000491258 ZNF182P17025 639 aaPredicted RBP3.39□□□□□ -1.87
PHC3-213ENST00000491258 RAPSNQ13702 412 aa3.39□□□□□ -1.87
PHC3-213ENST00000491258 HNRNPDQ14103 355 aaKnown RBP3.39□□□□□ -1.87
PHC3-213ENST00000491258 MORC3Q14149 939 aa3.39□□□□□ -1.87
PHC3-213ENST00000491258 C11orf53Q8IXP5 236 aa3.39□□□□□ -1.87
PHC3-213ENST00000491258 ENAHQ8N8S7 591 aaPredicted RBP3.39□□□□□ -1.87
PHC3-213ENST00000491258 TMEM178AQ8NBL3 297 aa3.39□□□□□ -1.87
PHC3-213ENST00000491258 OR1J2Q8NGS2 313 aa3.39□□□□□ -1.87
PHC3-213ENST00000491258 OR2L2Q8NH16 312 aa3.39□□□□□ -1.87
PHC3-213ENST00000491258 SLC39A13Q96H72 371 aa3.39□□□□□ -1.87
PHC3-213ENST00000491258 MAGED4Q96JG8 741 aa3.39□□□□□ -1.87
PHC3-213ENST00000491258 SEMA3CQ99985 751 aa3.39□□□□□ -1.87
PHC3-213ENST00000491258 ASAH2Q9NR71 780 aa3.39□□□□□ -1.87
PHC3-213ENST00000491258 COQ3Q9NZJ6 369 aa3.39□□□□□ -1.87
PHC3-213ENST00000491258 LRWD1Q9UFC0 647 aa3.39□□□□□ -1.87
PHC3-213ENST00000491258 NARFQ9UHQ1 456 aa3.39□□□□□ -1.87
PHC3-213ENST00000491258 LRRC37A3O60309 1634 aa3.39□□□□□ -1.87
PHC3-213ENST00000491258 SOS1Q07889 1333 aaPredicted RBP3.39□□□□□ -1.87
PHC3-213ENST00000491258 USP42Q9H9J4 1324 aaKnown RBP3.39□□□□□ -1.87
PHC3-213ENST00000491258 PEAK1Q9H792 1746 aa3.39□□□□□ -1.87
PHC3-213ENST00000491258 NPC1L1Q9UHC9 1359 aa3.38□□□□□ -1.87
PHC3-213ENST00000491258 CROCCQ5TZA2 2017 aa3.38□□□□□ -1.87
PHC3-213ENST00000491258 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.38□□□□□ -1.87
PHC3-213ENST00000491258 PLK4O00444 970 aa3.38□□□□□ -1.87
PHC3-213ENST00000491258 ZNF197O14709 1029 aa3.38□□□□□ -1.87
PHC3-213ENST00000491258 AP2A2O94973 939 aa3.38□□□□□ -1.87
PHC3-213ENST00000491258 STARD3NLO95772 234 aa3.38□□□□□ -1.87
PHC3-213ENST00000491258 IFIT1P09914 478 aaKnown RBP3.38□□□□□ -1.87
PHC3-213ENST00000491258 CDC25CP30307 473 aa3.38□□□□□ -1.87
PHC3-213ENST00000491258 EIF5P55010 431 aaKnown RBP3.38□□□□□ -1.87
PHC3-213ENST00000491258 FASTKD1Q53R41 847 aaKnown RBP3.38□□□□□ -1.87
PHC3-213ENST00000491258 LRRTM1Q86UE6 522 aa3.38□□□□□ -1.87
PHC3-213ENST00000491258 PTOV1Q86YD1 416 aa3.38□□□□□ -1.87
PHC3-213ENST00000491258 SLC5A8Q8N695 610 aa3.38□□□□□ -1.87
PHC3-213ENST00000491258 SLC47A1Q96FL8 570 aa3.38□□□□□ -1.87
PHC3-213ENST00000491258 PCNTO95613 3336 aa3.38□□□□□ -1.87
PHC3-213ENST00000491258 COL18A1P39060 1754 aa3.38□□□□□ -1.87
PHC3-213ENST00000491258 ADCY9O60503 1353 aa3.38□□□□□ -1.87
PHC3-213ENST00000491258 ATP10DQ9P241 1426 aa3.37□□□□□ -1.87
PHC3-213ENST00000491258 ABCA3Q99758 1704 aa3.37□□□□□ -1.87
PHC3-213ENST00000491258 CRYBG1Q9Y4K1 1723 aa3.37□□□□□ -1.87
PHC3-213ENST00000491258 FAM237AA0A1B0GTK4 181 aa3.37□□□□□ -1.87
PHC3-213ENST00000491258 C1orf226A1L170 272 aa3.37□□□□□ -1.87
PHC3-213ENST00000491258 TSPAN4O14817 238 aa3.37□□□□□ -1.87
PHC3-213ENST00000491258 RTL8CO15255 209 aa3.37□□□□□ -1.87
PHC3-213ENST00000491258 GPR137BO60478 399 aa3.37□□□□□ -1.87
PHC3-213ENST00000491258 CAPN2P17655 700 aa3.37□□□□□ -1.87
PHC3-213ENST00000491258 PPP2R1AP30153 589 aa3.37□□□□□ -1.87
PHC3-213ENST00000491258 PRKAR2BP31323 418 aa3.37□□□□□ -1.87
PHC3-213ENST00000491258 MMP15P51511 669 aa3.37□□□□□ -1.87
PHC3-213ENST00000491258 CCR5P51681 352 aa3.37□□□□□ -1.87
PHC3-213ENST00000491258 CD81P60033 236 aa3.37□□□□□ -1.87
PHC3-213ENST00000491258 MS4A2Q01362 244 aa3.37□□□□□ -1.87
PHC3-213ENST00000491258 NEXNQ0ZGT2 675 aa3.37□□□□□ -1.87
PHC3-213ENST00000491258 TEFQ10587 303 aa3.37□□□□□ -1.87
PHC3-213ENST00000491258 CAMK1Q14012 370 aa3.37□□□□□ -1.87
PHC3-213ENST00000491258 GSTA3Q16772 222 aa3.37□□□□□ -1.87
PHC3-213ENST00000491258 CTU2Q2VPK5 515 aaKnown RBP3.37□□□□□ -1.87
PHC3-213ENST00000491258 GLIPR1L2Q4G1C9 344 aa3.37□□□□□ -1.87
PHC3-213ENST00000491258 LCN10Q6JVE6 187 aa3.37□□□□□ -1.87
PHC3-213ENST00000491258 ZNF343Q6P1L6 599 aa3.37□□□□□ -1.87
PHC3-213ENST00000491258 FASTKD5Q7L8L6 764 aaKnown RBP3.37□□□□□ -1.87
PHC3-213ENST00000491258 SLC16A9Q7RTY1 509 aa3.37□□□□□ -1.87
PHC3-213ENST00000491258 PLD3Q8IV08 490 aa3.37□□□□□ -1.87
PHC3-213ENST00000491258 TTC5Q8N0Z6 440 aa3.37□□□□□ -1.87
PHC3-213ENST00000491258 SAMD3Q8N6K7 520 aa3.37□□□□□ -1.87
PHC3-213ENST00000491258 C1orf52Q8N6N3 182 aaKnown RBP3.37□□□□□ -1.87
PHC3-213ENST00000491258 SEMA4DQ92854 862 aa3.37□□□□□ -1.87
PHC3-213ENST00000491258 GTF3C6Q969F1 213 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms