RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 KIAA1161Q6NSJ0 714 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 ZFP1Q6P2D0 407 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 DNAJC24Q6P3W2 148 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 LRRC8BQ6P9F7 803 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 EPGNQ6UW88 154 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 LCLAT1Q6UWP7 414 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 NPNTQ6UXI9 565 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 ZNF813Q6ZN06 617 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 PLPPR4Q7Z2D5 763 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 C1QL2Q7Z5L3 287 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 BCDIN3DQ7Z5W3 292 aaKnown RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 KCTD20Q7Z5Y7 419 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 TECPR1Q7Z6L1 1165 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 SETD3Q86TU7 594 aaPredicted RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 PRPF39Q86UA1 669 aaKnown RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 RFX6Q8HWS3 928 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 ZBTB8OSQ8IWT0 167 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 CTAGE3PQ8IX95 158 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 YAF2Q8IY57 180 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 KIAA0319LQ8IZA0 1049 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 ADGRF2Q8IZF7 708 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 ST13P4Q8IZP2 240 aaPredicted RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 NDUFAF2Q8N183 169 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 CRYBG2Q8N1P7 616 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 FBXW8Q8N3Y1 598 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 MARVELD2Q8N4S9 558 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 CPSF7Q8N684 471 aaKnown RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 ARFGAP1Q8N6T3 406 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 PLD5Q8N7P1 536 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 NRACQ8N912 160 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 Q8N9P0 234 aaPredicted RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 DRAXINQ8NBI3 349 aaPredicted RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 ZBTB34Q8NCN2 500 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 ICA1LQ8NDH6 482 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 RBM15BQ8NDT2 890 aaKnown RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 OR6Y1Q8NGX8 325 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 C16orf52Q8NHV5 167 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 MAFAQ8NHW3 353 aaPredicted RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 TTC8Q8TAM2 541 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 GSDMBQ8TAX9 411 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 DTX3LQ8TDB6 740 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 ADAMTS16Q8TE57 1224 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 PPP4R1Q8TF05 950 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 DIS3LQ8TF46 1054 aaKnown RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 FAM172AQ8WUF8 416 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 PDCD6IPQ8WUM4 868 aaKnown RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 SLC35F5Q8WV83 523 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 WDR60Q8WVS4 1066 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 KBTBD7Q8WVZ9 684 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 PRPF31Q8WWY3 499 aaKnown RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 CENPIQ92674 756 aaPredicted RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 ZUFSPQ96AP4 578 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 SKA1Q96BD8 255 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 OPTNQ96CV9 577 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 RTP4Q96DX8 246 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 MCRS1Q96EZ8 462 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 APOPT1Q96IL0 206 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 ANKRD36BP1Q96IX9 119 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 HIC2Q96JB3 615 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 SERAC1Q96JX3 654 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 CNDP1Q96KN2 507 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 FAM111AQ96PZ2 611 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 TBCBQ99426 244 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 ECSITQ9BQ95 431 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 MESP1Q9BRJ9 268 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 C11orf70Q9BRQ4 267 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 TMEM79Q9BSE2 394 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 HERPUD2Q9BSE4 406 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 FAM167BQ9BTA0 163 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 MSTO1Q9BUK6 570 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 CINPQ9BW66 212 aaPredicted RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 SPATA16Q9BXB7 569 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 TMEM120AQ9BXJ8 343 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 YTHDF1Q9BYJ9 559 aaKnown RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 TRIM4Q9C037 500 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 BRD8Q9H0E9 1235 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 C2orf40Q9H1Z8 148 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 FZD8Q9H461 694 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 DBNDD1Q9H9R9 158 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 RPF1Q9H9Y2 349 aaKnown RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 ZMAT3Q9HA38 289 aaKnown RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 LRRC4Q9HBW1 653 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 APOBEC3GQ9HC16 384 aaKnown RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 RAVER2Q9HCJ3 691 aaKnown RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 XAB2Q9HCS7 855 aaKnown RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 PTPRHQ9HD43 1115 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 ZNF302Q9NR11 478 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 CISHQ9NSE2 258 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 FBXO28Q9NVF7 368 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 ETNK2Q9NVF9 386 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 DNAJC17Q9NVM6 304 aaKnown RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 NMRK1Q9NWW6 199 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 NSMCE4AQ9NXX6 385 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 STK32BQ9NY57 414 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 RBAKQ9NYW8 714 aaPredicted RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 PLK2Q9NYY3 685 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 ZIM2Q9NZV7 527 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 C6orf203Q9P0P8 240 aaPredicted RBP2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 COL20A1Q9P218 1284 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms