RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 SKA2Q8WVK7 121 aaPredicted RBP18.21■□□□□ 0.51
MCF2L-230ENST00000491028 NXNL1Q96CM4 212 aa18.21■□□□□ 0.51
MCF2L-230ENST00000491028 RMDN2Q96LZ7 410 aa18.21■□□□□ 0.51
MCF2L-230ENST00000491028 NCDNQ9UBB6 729 aa18.21■□□□□ 0.51
MCF2L-230ENST00000491028 PSMD13Q9UNM6 376 aa18.21■□□□□ 0.51
MCF2L-230ENST00000491028 WDFY4Q6ZS81 3184 aa18.21■□□□□ 0.51
MCF2L-230ENST00000491028 RALGAPA1Q6GYQ0 2036 aa18.2■□□□□ 0.5
MCF2L-230ENST00000491028 NEMP2A6NFY4 417 aa18.2■□□□□ 0.5
MCF2L-230ENST00000491028 OR5K4A6NMS3 321 aa18.2■□□□□ 0.5
MCF2L-230ENST00000491028 SLC16A5O15375 505 aa18.2■□□□□ 0.5
MCF2L-230ENST00000491028 SNX2O60749 519 aa18.2■□□□□ 0.5
MCF2L-230ENST00000491028 SDC3O75056 442 aa18.2■□□□□ 0.5
MCF2L-230ENST00000491028 C8GP07360 202 aa18.2■□□□□ 0.5
MCF2L-230ENST00000491028 ANXA6P08133 673 aa18.2■□□□□ 0.5
MCF2L-230ENST00000491028 CRHR1P34998 444 aa18.2■□□□□ 0.5
MCF2L-230ENST00000491028 GMPRP36959 345 aa18.2■□□□□ 0.5
MCF2L-230ENST00000491028 ATXN3P54252 364 aaPredicted RBP18.2■□□□□ 0.5
MCF2L-230ENST00000491028 MAGOHP61326 146 aaKnown RBP18.2■□□□□ 0.5
MCF2L-230ENST00000491028 TCEA2Q15560 299 aa18.2■□□□□ 0.5
MCF2L-230ENST00000491028 SEPT7Q16181 437 aaKnown RBP18.2■□□□□ 0.5
MCF2L-230ENST00000491028 ADAMTSL2Q86TH1 951 aa18.2■□□□□ 0.5
MCF2L-230ENST00000491028 SPNS2Q8IVW8 549 aa18.2■□□□□ 0.5
MCF2L-230ENST00000491028 PLD6Q8N2A8 252 aaKnown RBP18.2■□□□□ 0.5
MCF2L-230ENST00000491028 KIAA1191Q96A73 305 aa18.2■□□□□ 0.5
MCF2L-230ENST00000491028 IQCGQ9H095 443 aaKnown RBP18.2■□□□□ 0.5
MCF2L-230ENST00000491028 SMOC1Q9H4F8 434 aa18.2■□□□□ 0.5
MCF2L-230ENST00000491028 TFB2MQ9H5Q4 396 aaKnown RBP18.2■□□□□ 0.5
MCF2L-230ENST00000491028 CAAP1Q9H8G2 361 aa18.2■□□□□ 0.5
MCF2L-230ENST00000491028 PRDM8Q9NQV8 689 aa18.2■□□□□ 0.5
MCF2L-230ENST00000491028 TSR3Q9UJK0 312 aaKnown RBP18.2■□□□□ 0.5
MCF2L-230ENST00000491028 GRID1Q9ULK0 1009 aa18.2■□□□□ 0.5
MCF2L-230ENST00000491028 RUVBL2Q9Y230 463 aaKnown RBP18.2■□□□□ 0.5
MCF2L-230ENST00000491028 WDR37Q9Y2I8 494 aa18.2■□□□□ 0.5
MCF2L-230ENST00000491028 HEBP2Q9Y5Z4 205 aa18.2■□□□□ 0.5
MCF2L-230ENST00000491028 KIR2DS5A0A0G2JLQ3 304 aa18.19■□□□□ 0.5
MCF2L-230ENST00000491028 A0A0G2JNG1 304 aa18.19■□□□□ 0.5
MCF2L-230ENST00000491028 PROB1E7EW31 1015 aa18.19■□□□□ 0.5
MCF2L-230ENST00000491028 KIR2DS3K7RE56 304 aa18.19■□□□□ 0.5
MCF2L-230ENST00000491028 BTN3A1O00481 513 aa18.19■□□□□ 0.5
MCF2L-230ENST00000491028 YY2O15391 372 aa18.19■□□□□ 0.5
MCF2L-230ENST00000491028 ZBTB14O43829 449 aa18.19■□□□□ 0.5
MCF2L-230ENST00000491028 PSIP1O75475 530 aaKnown RBP18.19■□□□□ 0.5
MCF2L-230ENST00000491028 RPN2P04844 631 aa18.19■□□□□ 0.5
MCF2L-230ENST00000491028 RBP1P09455 135 aa18.19■□□□□ 0.5
MCF2L-230ENST00000491028 ZNF883P0CG24 379 aa18.19■□□□□ 0.5
MCF2L-230ENST00000491028 BRAFP15056 766 aa18.19■□□□□ 0.5
MCF2L-230ENST00000491028 TFEBP19484 476 aa18.19■□□□□ 0.5
MCF2L-230ENST00000491028 BNIP3Q12983 259 aa18.19■□□□□ 0.5
MCF2L-230ENST00000491028 KIR2DS5Q14953 304 aa18.19■□□□□ 0.5
MCF2L-230ENST00000491028 TCEAL6Q6IPX3 200 aa18.19■□□□□ 0.5
MCF2L-230ENST00000491028 KANSL1Q7Z3B3 1105 aa18.19■□□□□ 0.5
MCF2L-230ENST00000491028 RASGRP3Q8IV61 690 aa18.19■□□□□ 0.5
MCF2L-230ENST00000491028 SPATA6LQ8N4H0 392 aa18.19■□□□□ 0.5
MCF2L-230ENST00000491028 MINDY1Q8N5J2 469 aa18.19■□□□□ 0.5
MCF2L-230ENST00000491028 FAM46DQ8NEK8 389 aa18.19■□□□□ 0.5
MCF2L-230ENST00000491028 RHEBL1Q8TAI7 183 aa18.19■□□□□ 0.5
MCF2L-230ENST00000491028 ASB11Q8WXH4 323 aa18.19■□□□□ 0.5
MCF2L-230ENST00000491028 TFGQ92734 400 aaPredicted RBP18.19■□□□□ 0.5
MCF2L-230ENST00000491028 TCEAL3Q969E4 200 aa18.19■□□□□ 0.5
MCF2L-230ENST00000491028 C12orf66Q96MD2 445 aa18.19■□□□□ 0.5
MCF2L-230ENST00000491028 GPR78Q96P69 363 aa18.19■□□□□ 0.5
MCF2L-230ENST00000491028 GTPBP2Q9BX10 602 aaKnown RBP18.19■□□□□ 0.5
MCF2L-230ENST00000491028 UCKL1Q9NWZ5 548 aa18.19■□□□□ 0.5
MCF2L-230ENST00000491028 NPEPPSL1A6NEC2 478 aa18.18■□□□□ 0.5
MCF2L-230ENST00000491028 GFYI3L273 518 aa18.18■□□□□ 0.5
MCF2L-230ENST00000491028 PRPF4O43172 522 aaKnown RBP eCLIP18.18■□□□□ 0.5
MCF2L-230ENST00000491028 TYROBPO43914 113 aa18.18■□□□□ 0.5
MCF2L-230ENST00000491028 TOP3BO95985 862 aaKnown RBP18.18■□□□□ 0.5
MCF2L-230ENST00000491028 CATP04040 527 aaKnown RBP18.18■□□□□ 0.5
MCF2L-230ENST00000491028 ENO2P09104 434 aaPredicted RBP18.18■□□□□ 0.5
MCF2L-230ENST00000491028 MTHFD1P11586 935 aaKnown RBP18.18■□□□□ 0.5
MCF2L-230ENST00000491028 CREB1P16220 341 aa18.18■□□□□ 0.5
MCF2L-230ENST00000491028 CYP2A7P20853 494 aa18.18■□□□□ 0.5
MCF2L-230ENST00000491028 ABRQ12979 859 aa18.18■□□□□ 0.5
MCF2L-230ENST00000491028 CCDC153Q494R4 210 aa18.18■□□□□ 0.5
MCF2L-230ENST00000491028 TECRLQ5HYJ1 363 aa18.18■□□□□ 0.5
MCF2L-230ENST00000491028 ISCA2Q86U28 154 aa18.18■□□□□ 0.5
MCF2L-230ENST00000491028 AVL9Q8NBF6 648 aa18.18■□□□□ 0.5
MCF2L-230ENST00000491028 FBXO15Q8NCQ5 510 aaPredicted RBP18.18■□□□□ 0.5
MCF2L-230ENST00000491028 SPDYE1Q8NFV5 336 aaPredicted RBP18.18■□□□□ 0.5
MCF2L-230ENST00000491028 STAG3L4Q8TBR4 150 aa18.18■□□□□ 0.5
MCF2L-230ENST00000491028 MAGEC3Q8TD91 643 aa18.18■□□□□ 0.5
MCF2L-230ENST00000491028 SAP25Q8TEE9 199 aa18.18■□□□□ 0.5
MCF2L-230ENST00000491028 ZDHHC1Q8WTX9 485 aa18.18■□□□□ 0.5
MCF2L-230ENST00000491028 INSM2Q96T92 566 aaPredicted RBP18.18■□□□□ 0.5
MCF2L-230ENST00000491028 IL21RQ9HBE5 538 aa18.18■□□□□ 0.5
MCF2L-230ENST00000491028 ZNF358Q9NW07 568 aa18.18■□□□□ 0.5
MCF2L-230ENST00000491028 ASF1AQ9Y294 204 aa18.18■□□□□ 0.5
MCF2L-230ENST00000491028 LNP1A1A4G5 178 aa18.17■□□□□ 0.5
MCF2L-230ENST00000491028 CDC7O00311 574 aa18.17■□□□□ 0.5
MCF2L-230ENST00000491028 PCDHGA12O60330 932 aa18.17■□□□□ 0.5
MCF2L-230ENST00000491028 FOXD2O60548 495 aaPredicted RBP18.17■□□□□ 0.5
MCF2L-230ENST00000491028 SPAG7O75391 227 aa18.17■□□□□ 0.5
MCF2L-230ENST00000491028 EML2O95834 649 aa18.17■□□□□ 0.5
MCF2L-230ENST00000491028 ALPPL2P10696 532 aa18.17■□□□□ 0.5
MCF2L-230ENST00000491028 NDUFS1P28331 727 aa18.17■□□□□ 0.5
MCF2L-230ENST00000491028 GLRBP48167 497 aa18.17■□□□□ 0.5
MCF2L-230ENST00000491028 IL9RQ01113 521 aa18.17■□□□□ 0.5
MCF2L-230ENST00000491028 CLCA4Q14CN2 919 aa18.17■□□□□ 0.5
MCF2L-230ENST00000491028 TSNQ15631 228 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms