RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 FAM124BQ9H5Z6 455 aaPredicted RBP11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 MAT2BQ9NZL9 334 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 SH3BP4Q9P0V3 963 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 CD300AQ9UGN4 299 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 NUFIP1Q9UHK0 495 aaKnown RBP11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 CDK14O94921 469 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 GABARAPO95166 117 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 LCKP06239 509 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 S100A9P06702 114 aaKnown RBP11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 CCNCP24863 283 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 MAGEA3P43357 314 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 BACE1P56817 501 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 PAFAH1B3Q15102 231 aaKnown RBP11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 B3GNT9Q6UX72 402 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 KRT74Q7RTS7 529 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 GLT6D1Q7Z4J2 308 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 SLC51AQ86UW1 340 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 CYP4Z1Q86W10 505 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 LYSMD2Q8IV50 215 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 ASIC4Q96FT7 647 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 UXTQ9UBK9 157 aaPredicted RBP11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 PFDN2Q9UHV9 154 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 DNAJC15Q9Y5T4 150 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 KCNE2Q9Y6J6 123 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 MYCLP1P12525 358 aaPredicted RBP11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 GPX3P22352 226 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 GADD45AP24522 165 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 AQP1P29972 269 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 ARRB2P32121 409 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 RECQLP46063 649 aaPredicted RBP11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 SNRPD2P62316 118 aaKnown RBP11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 LGALS3BPQ08380 585 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 NFE2Q16621 373 aaPredicted RBP11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 CCDC58Q4VC31 144 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 RFPL4BQ6ZWI9 263 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 REPS2Q8NFH8 660 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 CERKQ8TCT0 537 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 AKAP1Q92667 903 aaKnown RBP eCLIP11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 GON7Q9BXV9 100 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 HOXD1Q9GZZ0 328 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 TMLHEQ9NVH6 421 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 NOD1Q9Y239 953 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 N6AMT1Q9Y5N5 214 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 CLDN5O00501 218 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 LRATO95237 230 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 ITGA2P17301 1181 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 IL4RP24394 825 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 CHI3L1P36222 383 aaPredicted RBP11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 CDC42EP1Q00587 391 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 FPGSQ05932 587 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 CDK10Q15131 360 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 PON2Q15165 354 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 LRIT3Q3SXY7 679 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 PRSS48Q7RTY5 328 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 ADAMTSL2Q86TH1 951 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 RETREG3Q86VR2 466 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 GLB1L3Q8NCI6 653 aaPredicted RBP11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 ZNF675Q8TD23 568 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 FRS2Q8WU20 508 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 C18orf25Q96B23 403 aaPredicted RBP11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 AKT1S1Q96B36 256 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 MLPHQ9BV36 600 aaPredicted RBP11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 DUSP16Q9BY84 665 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 TFB2MQ9H5Q4 396 aaKnown RBP11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 RDH8Q9NYR8 311 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 MALT1Q9UDY8 824 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 EIF2B4Q9UI10 523 aaKnown RBP11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 ATPIF1Q9UII2 106 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 CRLS1Q9UJA2 301 aa11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 ZNF490Q9ULM2 529 aaPredicted RBP11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 MAFBQ9Y5Q3 323 aaPredicted RBP11.11□□□□□ -0.63
CRNKL1-204ENST00000490910 A0A1B0GUL6 1792 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 TCRBV5S1A1TA0A578 114 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 B8ZZF3 427 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 BNIP3LO60238 219 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 EEDO75530 441 aaKnown RBP11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 SLC2A2P11168 524 aaPredicted RBP11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 ATF6P18850 670 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 AKAP5P24588 427 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 GMPSP49915 693 aaPredicted RBP11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 SPDYE7PQ495Y7 208 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 DCLRE1AQ6PJP8 1040 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 IKBIPQ70UQ0 350 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 SPATC1Q76KD6 591 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 ANKRD46Q86W74 232 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 EPHX4Q8IUS5 362 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 LRRC52Q8N7C0 313 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 PYURFQ96I23 114 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 FCRL5Q96RD9 977 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 SLC9A7Q96T83 725 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 FAM126AQ9BYI3 521 aaPredicted RBP11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 LRTM1Q9HBL6 345 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 ZBTB20Q9HC78 741 aaPredicted RBP11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 MRPL39Q9NYK5 338 aaKnown RBP11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 SNX6Q9UNH7 406 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 GNG14A0A1W2PPG7 69 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 MATN4O95460 622 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 ALPLP05186 524 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 GALNT1Q10472 559 aaPredicted RBP11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 SUZ12Q15022 739 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms