RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 MRPL18Q9H0U6 180 aaKnown RBP6.88□□□□□ -1.31
PDLIM1-203ENST00000490391 OR2AG1Q9H205 316 aa6.88□□□□□ -1.31
PDLIM1-203ENST00000490391 NOD2Q9HC29 1040 aa6.88□□□□□ -1.31
PDLIM1-203ENST00000490391 ARFGAP3Q9NP61 516 aa6.88□□□□□ -1.31
PDLIM1-203ENST00000490391 GPATCH2LQ9NWQ4 482 aa6.88□□□□□ -1.31
PDLIM1-203ENST00000490391 DTLQ9NZJ0 730 aa6.88□□□□□ -1.31
PDLIM1-203ENST00000490391 CDYLQ9Y232 598 aa6.88□□□□□ -1.31
PDLIM1-203ENST00000490391 DNAJC16Q9Y2G8 782 aa6.88□□□□□ -1.31
PDLIM1-203ENST00000490391 PLEKHA6Q9Y2H5 1048 aa6.88□□□□□ -1.31
PDLIM1-203ENST00000490391 WDR37Q9Y2I8 494 aa6.88□□□□□ -1.31
PDLIM1-203ENST00000490391 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.88□□□□□ -1.31
PDLIM1-203ENST00000490391 TRAV17A0A0B4J275 112 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 A0A0J9YYE9 177 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 CCDC66A2RUB6 948 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 SLC9B1P1A6NJY1 282 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 C2CD4BA6NLJ0 364 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 H3BMH7 237 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 ZNF749O43361 778 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 FZD6O60353 706 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 CTAG2O75638 210 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 MTA2O94776 668 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 PEX11BO96011 259 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 TRBC1P01850 177 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 PDHA1P08559 390 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 ZNF30P17039 623 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 ZNF7P17097 686 aaPredicted RBP6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 MMP11P24347 488 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 IL4RP24394 825 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 HOXC12P31275 282 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 SDC4P31431 198 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 KRT9P35527 623 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 SOX11P35716 441 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 PTPN9P43378 593 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 PMP22Q01453 160 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 LRRC63Q05C16 580 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 ADCY2Q08462 1091 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 RFTN1Q14699 578 aaPredicted RBP6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 INSCQ1MX18 579 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 FBLN7Q53RD9 439 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 COBLL1Q53SF7 1204 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 CES4AQ5XG92 561 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 TRIM65Q6PJ69 517 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 CRTC3Q6UUV7 619 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 KIRREL2Q6UWL6 708 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 KRBA2Q6ZNG9 492 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 C11orf96Q7Z7L8 435 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 SPPL2CQ8IUH8 684 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 TRIM59Q8IWR1 403 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 CHERPQ8IWX8 916 aaKnown RBP6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 RAVER1Q8IY67 606 aaKnown RBP6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 PGBD5Q8N414 524 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 DNAAF3Q8N9W5 541 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 TMEM35BQ8NCS4 154 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 JOSD2Q8TAC2 188 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 GPT2Q8TD30 523 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 CA5BP1Q8WTZ4 195 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 RXFP2Q8WXD0 754 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 SDCCAG3Q96C92 435 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 HSH2DQ96JZ2 352 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 NUDCD1Q96RS6 583 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 TSG101Q99816 390 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 TIMM29Q9BSF4 260 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 CATSPERBQ9H7T0 1116 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 FANCEQ9HB96 536 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 SYTL2Q9HCH5 934 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 METTL5Q9NRN9 209 aaKnown RBP6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 C1GALT1Q9NS00 363 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 SLC22A11Q9NSA0 550 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 HRASLS2Q9NWW9 162 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 SOHLH2Q9NX45 425 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 PCDHGA11Q9Y5H2 935 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 HS3ST3B1Q9Y662 390 aa6.87□□□□□ -1.31
PDLIM1-203ENST00000490391 TENM1Q9UKZ4 2725 aa6.86□□□□□ -1.31
PDLIM1-203ENST00000490391 SERTM1A2A2V5 107 aa6.86□□□□□ -1.31
PDLIM1-203ENST00000490391 ARHGAP42A6NI28 874 aa6.86□□□□□ -1.31
PDLIM1-203ENST00000490391 GPR89AB7ZAQ6 455 aa6.86□□□□□ -1.31
PDLIM1-203ENST00000490391 FGF10O15520 208 aaPredicted RBP6.86□□□□□ -1.31
PDLIM1-203ENST00000490391 VEGFDO43915 354 aa6.86□□□□□ -1.31
PDLIM1-203ENST00000490391 PRAMEF2O60811 474 aa6.86□□□□□ -1.31
PDLIM1-203ENST00000490391 ZWINTO95229 277 aa6.86□□□□□ -1.31
PDLIM1-203ENST00000490391 CRYABP02511 175 aaKnown RBP6.86□□□□□ -1.31
PDLIM1-203ENST00000490391 HOXD4P09016 255 aaPredicted RBP6.86□□□□□ -1.31
PDLIM1-203ENST00000490391 HBQ1P09105 142 aa6.86□□□□□ -1.31
PDLIM1-203ENST00000490391 GPR89BP0CG08 455 aa6.86□□□□□ -1.31
PDLIM1-203ENST00000490391 PNMA6AP0CW24 399 aaPredicted RBP6.86□□□□□ -1.31
PDLIM1-203ENST00000490391 DNASE1P24855 282 aa6.86□□□□□ -1.31
PDLIM1-203ENST00000490391 RENBPP51606 427 aa6.86□□□□□ -1.31
PDLIM1-203ENST00000490391 ARG2P78540 354 aa6.86□□□□□ -1.31
PDLIM1-203ENST00000490391 IL10RBQ08334 325 aa6.86□□□□□ -1.31
PDLIM1-203ENST00000490391 IHHQ14623 411 aa6.86□□□□□ -1.31
PDLIM1-203ENST00000490391 SLC9A5Q14940 896 aa6.86□□□□□ -1.31
PDLIM1-203ENST00000490391 TDRD12Q587J7 1177 aaKnown RBP6.86□□□□□ -1.31
PDLIM1-203ENST00000490391 ARMC12Q5T9G4 340 aa6.86□□□□□ -1.31
PDLIM1-203ENST00000490391 IRAK1BP1Q5VVH5 260 aa6.86□□□□□ -1.31
PDLIM1-203ENST00000490391 RHBDD2Q6NTF9 364 aa6.86□□□□□ -1.31
PDLIM1-203ENST00000490391 SLFN11Q7Z7L1 901 aa6.86□□□□□ -1.31
PDLIM1-203ENST00000490391 ADGRG6Q86SQ4 1221 aa6.86□□□□□ -1.31
PDLIM1-203ENST00000490391 NPWQ8N729 165 aa6.86□□□□□ -1.31
PDLIM1-203ENST00000490391 PLPP7Q8NBV4 271 aa6.86□□□□□ -1.31
PDLIM1-203ENST00000490391 AGAP11Q8TF27 550 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms