RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 IRAK4Q9NWZ3 460 aa3.28□□□□□ -1.88
HMGN1-218ENST00000490032 ORC3Q9UBD5 711 aaPredicted RBP3.28□□□□□ -1.88
HMGN1-218ENST00000490032 FBXL17Q9UF56 701 aa3.28□□□□□ -1.88
HMGN1-218ENST00000490032 CDRT15L2A8MXV6 281 aa3.27□□□□□ -1.89
HMGN1-218ENST00000490032 MYO1GB0I1T2 1018 aa3.27□□□□□ -1.89
HMGN1-218ENST00000490032 NPHP1O15259 732 aa3.27□□□□□ -1.89
HMGN1-218ENST00000490032 CDC123O75794 336 aaPredicted RBP3.27□□□□□ -1.89
HMGN1-218ENST00000490032 TPPPO94811 219 aa3.27□□□□□ -1.89
HMGN1-218ENST00000490032 MOCS3O95396 460 aa3.27□□□□□ -1.89
HMGN1-218ENST00000490032 SCGB1D1O95968 90 aa3.27□□□□□ -1.89
HMGN1-218ENST00000490032 GATA1P15976 413 aaPredicted RBP3.27□□□□□ -1.89
HMGN1-218ENST00000490032 PPARGP37231 505 aaPredicted RBP3.27□□□□□ -1.89
HMGN1-218ENST00000490032 MAGEA11P43364 429 aa3.27□□□□□ -1.89
HMGN1-218ENST00000490032 PRKCZQ05513 592 aa3.27□□□□□ -1.89
HMGN1-218ENST00000490032 CRYMQ14894 314 aa3.27□□□□□ -1.89
HMGN1-218ENST00000490032 RRS1Q15050 365 aaKnown RBP3.27□□□□□ -1.89
HMGN1-218ENST00000490032 SNAI3Q3KNW1 292 aa3.27□□□□□ -1.89
HMGN1-218ENST00000490032 SUSD1Q6UWL2 747 aa3.27□□□□□ -1.89
HMGN1-218ENST00000490032 PIGZQ86VD9 579 aa3.27□□□□□ -1.89
HMGN1-218ENST00000490032 TEX11Q8IYF3 940 aa3.27□□□□□ -1.89
HMGN1-218ENST00000490032 FAM81BQ96LP2 452 aa3.27□□□□□ -1.89
HMGN1-218ENST00000490032 AGAP3Q96P47 875 aa3.27□□□□□ -1.89
HMGN1-218ENST00000490032 PKP2Q99959 881 aa3.27□□□□□ -1.89
HMGN1-218ENST00000490032 SYT15Q9BQS2 421 aa3.27□□□□□ -1.89
HMGN1-218ENST00000490032 P2RY12Q9H244 342 aa3.27□□□□□ -1.89
HMGN1-218ENST00000490032 ARRDC1-AS1Q9H2J1 176 aa3.27□□□□□ -1.89
HMGN1-218ENST00000490032 PCDHGA5Q9Y5G8 931 aa3.27□□□□□ -1.89
HMGN1-218ENST00000490032 LOC101059948A0A1B0GTJ6 334 aa3.26□□□□□ -1.89
HMGN1-218ENST00000490032 MSGN1A6NI15 193 aa3.26□□□□□ -1.89
HMGN1-218ENST00000490032 J3KRW8 73 aa3.26□□□□□ -1.89
HMGN1-218ENST00000490032 KLF11O14901 512 aa3.26□□□□□ -1.89
HMGN1-218ENST00000490032 PRKRAO75569 313 aaKnown RBP3.26□□□□□ -1.89
HMGN1-218ENST00000490032 TM4SF1P30408 202 aa3.26□□□□□ -1.89
HMGN1-218ENST00000490032 ARL3P36405 182 aa3.26□□□□□ -1.89
HMGN1-218ENST00000490032 NKX2-1P43699 371 aaPredicted RBP3.26□□□□□ -1.89
HMGN1-218ENST00000490032 PLA2G7Q13093 441 aa3.26□□□□□ -1.89
HMGN1-218ENST00000490032 MELKQ14680 651 aa3.26□□□□□ -1.89
HMGN1-218ENST00000490032 TAF13Q15543 124 aa3.26□□□□□ -1.89
HMGN1-218ENST00000490032 ZNF239Q16600 458 aaKnown RBP3.26□□□□□ -1.89
HMGN1-218ENST00000490032 JAKMIP3Q5VZ66 844 aa3.26□□□□□ -1.89
HMGN1-218ENST00000490032 IKBIPQ70UQ0 350 aa3.26□□□□□ -1.89
HMGN1-218ENST00000490032 SH2D6Q7Z4S9 175 aa3.26□□□□□ -1.89
HMGN1-218ENST00000490032 MARVELD2Q8N4S9 558 aa3.26□□□□□ -1.89
HMGN1-218ENST00000490032 DCLK2Q8N568 766 aa3.26□□□□□ -1.89
HMGN1-218ENST00000490032 MAPKAPK5-AS1Q8N8E1 139 aa3.26□□□□□ -1.89
HMGN1-218ENST00000490032 AMER3Q8N944 861 aa3.26□□□□□ -1.89
HMGN1-218ENST00000490032 DYRK2Q92630 601 aa3.26□□□□□ -1.89
HMGN1-218ENST00000490032 ERLEC1Q96DZ1 483 aa3.26□□□□□ -1.89
HMGN1-218ENST00000490032 MTERF3Q96E29 417 aa3.26□□□□□ -1.89
HMGN1-218ENST00000490032 NSL1Q96IY1 281 aa3.26□□□□□ -1.89
HMGN1-218ENST00000490032 MAGED4Q96JG8 741 aa3.26□□□□□ -1.89
HMGN1-218ENST00000490032 PITPNM3Q9BZ71 974 aa3.26□□□□□ -1.89
HMGN1-218ENST00000490032 VN1R1Q9GZP7 353 aa3.26□□□□□ -1.89
HMGN1-218ENST00000490032 RPS10P5Q9NQ39 176 aa3.26□□□□□ -1.89
HMGN1-218ENST00000490032 TAB2Q9NYJ8 693 aa3.26□□□□□ -1.89
HMGN1-218ENST00000490032 OSGIN1Q9UJX0 560 aa3.26□□□□□ -1.89
HMGN1-218ENST00000490032 RSL1D1O76021 490 aaKnown RBP3.25□□□□□ -1.89
HMGN1-218ENST00000490032 GPIP06744 558 aa3.25□□□□□ -1.89
HMGN1-218ENST00000490032 CA4P22748 312 aa3.25□□□□□ -1.89
HMGN1-218ENST00000490032 MAN1A1P33908 653 aa3.25□□□□□ -1.89
HMGN1-218ENST00000490032 CDH8P55286 799 aa3.25□□□□□ -1.89
HMGN1-218ENST00000490032 SLC8A3P57103 927 aa3.25□□□□□ -1.89
HMGN1-218ENST00000490032 B3GALT5-AS1P59052 145 aa3.25□□□□□ -1.89
HMGN1-218ENST00000490032 MAMLD1Q13495 774 aa3.25□□□□□ -1.89
HMGN1-218ENST00000490032 KCNC3Q14003 757 aa3.25□□□□□ -1.89
HMGN1-218ENST00000490032 HNRNPDQ14103 355 aaKnown RBP3.25□□□□□ -1.89
HMGN1-218ENST00000490032 MDH1BQ5I0G3 518 aa3.25□□□□□ -1.89
HMGN1-218ENST00000490032 DOK6Q6PKX4 331 aa3.25□□□□□ -1.89
HMGN1-218ENST00000490032 CHST9Q7L1S5 443 aa3.25□□□□□ -1.89
HMGN1-218ENST00000490032 WDTC1Q8N5D0 677 aa3.25□□□□□ -1.89
HMGN1-218ENST00000490032 PPFIBP2Q8ND30 876 aa3.25□□□□□ -1.89
HMGN1-218ENST00000490032 OR4C3Q8NH37 302 aa3.25□□□□□ -1.89
HMGN1-218ENST00000490032 RNF128Q8TEB7 428 aa3.25□□□□□ -1.89
HMGN1-218ENST00000490032 SCFD2Q8WU76 684 aa3.25□□□□□ -1.89
HMGN1-218ENST00000490032 SUSD6Q92537 303 aa3.25□□□□□ -1.89
HMGN1-218ENST00000490032 USP6NLQ92738 828 aa3.25□□□□□ -1.89
HMGN1-218ENST00000490032 LRRC59Q96AG4 307 aaKnown RBP3.25□□□□□ -1.89
HMGN1-218ENST00000490032 SRSF8Q9BRL6 282 aaKnown RBP3.25□□□□□ -1.89
HMGN1-218ENST00000490032 TRAF4Q9BUZ4 470 aaPredicted RBP3.25□□□□□ -1.89
HMGN1-218ENST00000490032 PPIL3Q9H2H8 161 aaKnown RBP3.25□□□□□ -1.89
HMGN1-218ENST00000490032 SDR39U1Q9NRG7 319 aaPredicted RBP3.25□□□□□ -1.89
HMGN1-218ENST00000490032 ZNF701Q9NV72 531 aaPredicted RBP3.25□□□□□ -1.89
HMGN1-218ENST00000490032 AASSQ9UDR5 926 aa3.25□□□□□ -1.89
HMGN1-218ENST00000490032 A0A087X0M5 115 aa3.24□□□□□ -1.89
HMGN1-218ENST00000490032 A0A1B0GX30 115 aa3.24□□□□□ -1.89
HMGN1-218ENST00000490032 F5H0A9 414 aaPredicted RBP3.24□□□□□ -1.89
HMGN1-218ENST00000490032 CD4P01730 458 aa3.24□□□□□ -1.89
HMGN1-218ENST00000490032 RB1P06400 928 aa3.24□□□□□ -1.89
HMGN1-218ENST00000490032 TRIM49P0CI25 452 aa3.24□□□□□ -1.89
HMGN1-218ENST00000490032 TRIM49CP0CI26 452 aa3.24□□□□□ -1.89
HMGN1-218ENST00000490032 CA6P23280 308 aa3.24□□□□□ -1.89
HMGN1-218ENST00000490032 TLX1P31314 330 aaPredicted RBP3.24□□□□□ -1.89
HMGN1-218ENST00000490032 CX3CL1P78423 397 aa3.24□□□□□ -1.89
HMGN1-218ENST00000490032 DLG2Q15700 870 aa3.24□□□□□ -1.89
HMGN1-218ENST00000490032 UGP2Q16851 508 aa3.24□□□□□ -1.89
HMGN1-218ENST00000490032 SGSM1Q2NKQ1 1148 aa3.24□□□□□ -1.89
HMGN1-218ENST00000490032 FAM98BQ52LJ0 330 aaKnown RBP3.24□□□□□ -1.89
HMGN1-218ENST00000490032 IL27RAQ6UWB1 636 aa3.24□□□□□ -1.89
HMGN1-218ENST00000490032 INTS8Q75QN2 995 aaKnown RBP3.24□□□□□ -1.89
HMGN1-218ENST00000490032 P2RY8Q86VZ1 359 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms